RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 SH3BGRL3Q9H299 93 aa10.38□□□□□ -0.75
CDK9-204ENST00000491521 ARV1Q9H2C2 271 aa10.38□□□□□ -0.75
CDK9-204ENST00000491521 SLC39A9Q9NUM3 307 aa10.38□□□□□ -0.75
CDK9-204ENST00000491521 TIMM9Q9Y5J7 89 aa10.38□□□□□ -0.75
CDK9-204ENST00000491521 SMAD5-AS1Q9Y6J3 95 aa10.38□□□□□ -0.75
CDK9-204ENST00000491521 U3KQK5 164 aa10.38□□□□□ -0.75
CDK9-204ENST00000491521 HUWE1Q7Z6Z7 4374 aaKnown RBP10.38□□□□□ -0.75
CDK9-204ENST00000491521 STAB2Q8WWQ8 2551 aa10.37□□□□□ -0.75
CDK9-204ENST00000491521 IGHV3OR16-8A0A075B7F1 116 aa10.37□□□□□ -0.75
CDK9-204ENST00000491521 CFDP00746 253 aaPredicted RBP10.37□□□□□ -0.75
CDK9-204ENST00000491521 IL4P05112 153 aa10.37□□□□□ -0.75
CDK9-204ENST00000491521 OR5G3P0C626 314 aa10.37□□□□□ -0.75
CDK9-204ENST00000491521 LINC00869P0C866 280 aa10.37□□□□□ -0.75
CDK9-204ENST00000491521 NHLRC4P0CG21 123 aaPredicted RBP10.37□□□□□ -0.75
CDK9-204ENST00000491521 GP9P14770 177 aa10.37□□□□□ -0.75
CDK9-204ENST00000491521 ZP3P21754 424 aa10.37□□□□□ -0.75
CDK9-204ENST00000491521 ELLP55199 621 aaPredicted RBP10.37□□□□□ -0.75
CDK9-204ENST00000491521 B2MP61769 119 aa10.37□□□□□ -0.75
CDK9-204ENST00000491521 EIF5AL1Q6IS14 154 aaKnown RBP10.37□□□□□ -0.75
CDK9-204ENST00000491521 TOMM20LQ6UXN7 152 aa10.37□□□□□ -0.75
CDK9-204ENST00000491521 OR1B1Q8NGR6 318 aa10.37□□□□□ -0.75
CDK9-204ENST00000491521 STOML3Q8TAV4 291 aa10.37□□□□□ -0.75
CDK9-204ENST00000491521 WWC2-AS2Q96NR7 200 aa10.37□□□□□ -0.75
CDK9-204ENST00000491521 NDUFA4O00483 81 aa10.36□□□□□ -0.75
CDK9-204ENST00000491521 SYNJ2BPP57105 145 aa10.36□□□□□ -0.75
CDK9-204ENST00000491521 PRR20EP86478 221 aa10.36□□□□□ -0.75
CDK9-204ENST00000491521 PRR20CP86479 221 aa10.36□□□□□ -0.75
CDK9-204ENST00000491521 PRR20DP86480 221 aa10.36□□□□□ -0.75
CDK9-204ENST00000491521 PRR20BP86481 221 aa10.36□□□□□ -0.75
CDK9-204ENST00000491521 PRR20AP86496 221 aa10.36□□□□□ -0.75
CDK9-204ENST00000491521 GPHB5Q86YW7 130 aa10.36□□□□□ -0.75
CDK9-204ENST00000491521 TMED6Q8WW62 240 aa10.36□□□□□ -0.75
CDK9-204ENST00000491521 PSMG3Q9BT73 122 aaPredicted RBP10.36□□□□□ -0.75
CDK9-204ENST00000491521 DOK5Q9P104 306 aa10.36□□□□□ -0.75
CDK9-204ENST00000491521 RYR3Q15413 4870 aa10.36□□□□□ -0.75
CDK9-204ENST00000491521 ZNF207O43670 478 aaKnown RBP10.35□□□□□ -0.75
CDK9-204ENST00000491521 COX7A2P2O60397 106 aa10.35□□□□□ -0.75
CDK9-204ENST00000491521 HYPMO75409 117 aa10.35□□□□□ -0.75
CDK9-204ENST00000491521 SEC11BP0C7V7 166 aa10.35□□□□□ -0.75
CDK9-204ENST00000491521 SPP1P10451 314 aa10.35□□□□□ -0.75
CDK9-204ENST00000491521 SERF2P84101 59 aa10.35□□□□□ -0.75
CDK9-204ENST00000491521 ACOT6Q3I5F7 207 aaPredicted RBP10.35□□□□□ -0.75
CDK9-204ENST00000491521 AKR1C8PQ5T2L2 129 aa10.35□□□□□ -0.75
CDK9-204ENST00000491521 OR1L4Q8NGR5 311 aa10.35□□□□□ -0.75
CDK9-204ENST00000491521 RNF125Q96EQ8 232 aa10.35□□□□□ -0.75
CDK9-204ENST00000491521 DNAJC4Q9NNZ3 241 aa10.35□□□□□ -0.75
CDK9-204ENST00000491521 MBP02144 154 aa10.34□□□□□ -0.75
CDK9-204ENST00000491521 KLF5Q13887 457 aaPredicted RBP10.34□□□□□ -0.75
CDK9-204ENST00000491521 PXDC1Q5TGL8 231 aa10.34□□□□□ -0.75
CDK9-204ENST00000491521 C10orf113Q5VZT2 155 aa10.34□□□□□ -0.75
CDK9-204ENST00000491521 UNQ9165/PRO28630Q6UXU0 137 aa10.34□□□□□ -0.75
CDK9-204ENST00000491521 SBSPONQ8IVN8 264 aa10.34□□□□□ -0.75
CDK9-204ENST00000491521 OR10G4Q8NGN3 311 aa10.34□□□□□ -0.75
CDK9-204ENST00000491521 OR10G9Q8NGN4 311 aa10.34□□□□□ -0.75
CDK9-204ENST00000491521 OR10G7Q8NGN6 311 aa10.34□□□□□ -0.75
CDK9-204ENST00000491521 RABAC1Q9UI14 185 aa10.34□□□□□ -0.75
CDK9-204ENST00000491521 HIGD1AQ9Y241 93 aa10.34□□□□□ -0.75
CDK9-204ENST00000491521 UFC1Q9Y3C8 167 aa10.34□□□□□ -0.75
CDK9-204ENST00000491521 ELOA3CA0A087WX78 387 aaPredicted RBP10.33□□□□□ -0.76
CDK9-204ENST00000491521 A0A1W2PPV4 95 aa10.33□□□□□ -0.76
CDK9-204ENST00000491521 FRMD6-AS1P0C7T7 363 aa10.33□□□□□ -0.76
CDK9-204ENST00000491521 M6PRP20645 277 aa10.33□□□□□ -0.76
CDK9-204ENST00000491521 NPPCP23582 126 aa10.33□□□□□ -0.76
CDK9-204ENST00000491521 USF2Q15853 346 aaPredicted RBP10.33□□□□□ -0.76
CDK9-204ENST00000491521 GCSAMLQ5JQS6 135 aa10.33□□□□□ -0.76
CDK9-204ENST00000491521 ALKAL2Q6UX46 152 aa10.33□□□□□ -0.76
CDK9-204ENST00000491521 S100A7AQ86SG5 101 aa10.33□□□□□ -0.76
CDK9-204ENST00000491521 OR9G4Q8NGQ1 327 aa10.33□□□□□ -0.76
CDK9-204ENST00000491521 METTL26Q96S19 204 aa10.33□□□□□ -0.76
CDK9-204ENST00000491521 PFDN5Q99471 154 aa10.33□□□□□ -0.76
CDK9-204ENST00000491521 VSIRQ9H7M9 311 aa10.33□□□□□ -0.76
CDK9-204ENST00000491521 ZFAND3Q9H8U3 227 aa10.33□□□□□ -0.76
CDK9-204ENST00000491521 PFDN2Q9UHV9 154 aa10.33□□□□□ -0.76
CDK9-204ENST00000491521 IGLV1-51P01701 117 aa10.32□□□□□ -0.76
CDK9-204ENST00000491521 S100A7P31151 101 aa10.32□□□□□ -0.76
CDK9-204ENST00000491521 PLP1P60201 277 aa10.32□□□□□ -0.76
CDK9-204ENST00000491521 RAB2AP61019 212 aa10.32□□□□□ -0.76
CDK9-204ENST00000491521 TM4SF20Q53R12 229 aa10.32□□□□□ -0.76
CDK9-204ENST00000491521 TMEM41BQ5BJD5 291 aa10.32□□□□□ -0.76
CDK9-204ENST00000491521 FAM122CQ6P4D5 195 aa10.32□□□□□ -0.76
CDK9-204ENST00000491521 TEX261Q6UWH6 196 aa10.32□□□□□ -0.76
CDK9-204ENST00000491521 PATE2Q6UY27 113 aa10.32□□□□□ -0.76
CDK9-204ENST00000491521 GATAD1Q8WUU5 269 aa10.32□□□□□ -0.76
CDK9-204ENST00000491521 TMEM190Q8WZ59 177 aa10.32□□□□□ -0.76
CDK9-204ENST00000491521 PHYHIPLQ96FC7 376 aa10.32□□□□□ -0.76
CDK9-204ENST00000491521 NARS2Q96I59 477 aaKnown RBP10.32□□□□□ -0.76
CDK9-204ENST00000491521 PEMTQ9UBM1 199 aa10.32□□□□□ -0.76
CDK9-204ENST00000491521 DNAH7Q8WXX0 4024 aa10.32□□□□□ -0.76
CDK9-204ENST00000491521 IGHV3-49A0A0A0MS15 119 aa10.31□□□□□ -0.76
CDK9-204ENST00000491521 UMAD1C9J7I0 102 aa10.31□□□□□ -0.76
CDK9-204ENST00000491521 K7EMT4 169 aa10.31□□□□□ -0.76
CDK9-204ENST00000491521 LGALS9O00182 355 aa10.31□□□□□ -0.76
CDK9-204ENST00000491521 RHOBP62745 196 aa10.31□□□□□ -0.76
CDK9-204ENST00000491521 FAM74A1Q5RGS3 127 aa10.31□□□□□ -0.76
CDK9-204ENST00000491521 FAM78BQ5VT40 261 aa10.31□□□□□ -0.76
CDK9-204ENST00000491521 IL34Q6ZMJ4 242 aa10.31□□□□□ -0.76
CDK9-204ENST00000491521 LINC00305Q7Z4B0 112 aa10.31□□□□□ -0.76
CDK9-204ENST00000491521 TMEM37Q8WXS4 190 aa10.31□□□□□ -0.76
CDK9-204ENST00000491521 ZNF414Q96IQ9 312 aa10.31□□□□□ -0.76
CDK9-204ENST00000491521 UHRF2Q96PU4 802 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms