RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 OSTCQ9NRP0 149 aa18.08■□□□□ 0.48
USF3-203ENST00000491165 HILPDAQ9Y5L2 63 aa18.08■□□□□ 0.48
USF3-203ENST00000491165 MAST4O15021 2626 aa18.08■□□□□ 0.48
USF3-203ENST00000491165 A0A1W2PRE2 83 aa18.07■□□□□ 0.48
USF3-203ENST00000491165 ZNF705FA8MVS1 300 aaPredicted RBP18.07■□□□□ 0.48
USF3-203ENST00000491165 NPFFO15130 113 aa18.07■□□□□ 0.48
USF3-203ENST00000491165 ZNF705DP0CH99 300 aaPredicted RBP18.07■□□□□ 0.48
USF3-203ENST00000491165 ZNF705BP0CI00 300 aaPredicted RBP18.07■□□□□ 0.48
USF3-203ENST00000491165 C8orf88P0DMB2 117 aa18.07■□□□□ 0.48
USF3-203ENST00000491165 HTR1DP28221 377 aa18.07■□□□□ 0.48
USF3-203ENST00000491165 MLANAQ16655 118 aa18.07■□□□□ 0.48
USF3-203ENST00000491165 IL17RELQ6ZVW7 336 aa18.07■□□□□ 0.48
USF3-203ENST00000491165 BAGE3Q86Y29 109 aa18.07■□□□□ 0.48
USF3-203ENST00000491165 BAGE2Q86Y30 109 aa18.07■□□□□ 0.48
USF3-203ENST00000491165 MRPL32Q9BYC8 188 aaKnown RBP18.07■□□□□ 0.48
USF3-203ENST00000491165 Q0VG73 95 aa18.07■□□□□ 0.48
USF3-203ENST00000491165 CACNG8Q8WXS5 425 aa18.07■□□□□ 0.48
USF3-203ENST00000491165 SLC25A33Q9BSK2 321 aa18.07■□□□□ 0.48
USF3-203ENST00000491165 NDUFA4L2Q9NRX3 87 aa18.07■□□□□ 0.48
USF3-203ENST00000491165 FSHBP01225 129 aa18.06■□□□□ 0.48
USF3-203ENST00000491165 FRMD6-AS1P0C7T7 363 aa18.06■□□□□ 0.48
USF3-203ENST00000491165 CX3CL1P78423 397 aa18.06■□□□□ 0.48
USF3-203ENST00000491165 ERHP84090 104 aaKnown RBP18.06■□□□□ 0.48
USF3-203ENST00000491165 WDR73Q6P4I2 378 aa18.06■□□□□ 0.48
USF3-203ENST00000491165 Q6ZWC4 215 aa18.06■□□□□ 0.48
USF3-203ENST00000491165 RNASE7Q9H1E1 156 aaKnown RBP18.06■□□□□ 0.48
USF3-203ENST00000491165 DPM3Q9P2X0 92 aa18.06■□□□□ 0.48
USF3-203ENST00000491165 TNCP24821 2201 aa18.06■□□□□ 0.48
USF3-203ENST00000491165 MTORP42345 2549 aa18.06■□□□□ 0.48
USF3-203ENST00000491165 F8P00451 2351 aa18.05■□□□□ 0.48
USF3-203ENST00000491165 MT-ND6P03923 174 aa18.05■□□□□ 0.48
USF3-203ENST00000491165 RPL8P62917 257 aaKnown RBP18.05■□□□□ 0.48
USF3-203ENST00000491165 SUMO1P63165 101 aaKnown RBP18.05■□□□□ 0.48
USF3-203ENST00000491165 C22orf15Q8WYQ4 148 aa18.05■□□□□ 0.48
USF3-203ENST00000491165 H0YJW9 148 aa18.05■□□□□ 0.48
USF3-203ENST00000491165 ISLRO14498 428 aa18.05■□□□□ 0.48
USF3-203ENST00000491165 EREGO14944 169 aa18.05■□□□□ 0.48
USF3-203ENST00000491165 TPTE2P1Q5T6R2 138 aa18.05■□□□□ 0.48
USF3-203ENST00000491165 RNF2Q99496 336 aa18.05■□□□□ 0.48
USF3-203ENST00000491165 A0A1W2PPI3 338 aa18.04■□□□□ 0.48
USF3-203ENST00000491165 FBLN7Q53RD9 439 aa18.04■□□□□ 0.48
USF3-203ENST00000491165 TOMM20LQ6UXN7 152 aa18.04■□□□□ 0.48
USF3-203ENST00000491165 IGHV3-72A0A0B4J1Y9 119 aa18.04■□□□□ 0.48
USF3-203ENST00000491165 LY6G6DO95868 133 aa18.04■□□□□ 0.48
USF3-203ENST00000491165 FXYD3Q14802 87 aa18.04■□□□□ 0.48
USF3-203ENST00000491165 COX19Q49B96 90 aa18.04■□□□□ 0.48
USF3-203ENST00000491165 TMEM177Q53S58 311 aa18.04■□□□□ 0.48
USF3-203ENST00000491165 TGIF2LXQ8IUE1 241 aa18.04■□□□□ 0.48
USF3-203ENST00000491165 OR5AN1Q8NGI8 311 aa18.04■□□□□ 0.48
USF3-203ENST00000491165 RPEQ96AT9 228 aa18.04■□□□□ 0.48
USF3-203ENST00000491165 IGF2BP2-AS1Q96M15 143 aa18.04■□□□□ 0.48
USF3-203ENST00000491165 HSPB9Q9BQS6 159 aa18.04■□□□□ 0.48
USF3-203ENST00000491165 NAT8BQ9UHF3 227 aa18.04■□□□□ 0.48
USF3-203ENST00000491165 AMMECR1Q9Y4X0 333 aaPredicted RBP18.04■□□□□ 0.48
USF3-203ENST00000491165 NAV3Q8IVL0 2385 aa18.03■□□□□ 0.48
USF3-203ENST00000491165 IGHV1-3A0A0C4DH29 117 aa18.03■□□□□ 0.48
USF3-203ENST00000491165 INS-IGF2F8WCM5 200 aa18.03■□□□□ 0.48
USF3-203ENST00000491165 BCL6BQ8N143 479 aaPredicted RBP18.03■□□□□ 0.48
USF3-203ENST00000491165 OR5AU1Q8NGC0 362 aa18.03■□□□□ 0.48
USF3-203ENST00000491165 OR2T6Q8NHC8 308 aa18.03■□□□□ 0.48
USF3-203ENST00000491165 FLYWCH2Q96CP2 140 aaKnown RBP18.03■□□□□ 0.48
USF3-203ENST00000491165 SLC25A2Q9BXI2 301 aa18.03■□□□□ 0.48
USF3-203ENST00000491165 SAMD10Q9BYL1 202 aa18.03■□□□□ 0.48
USF3-203ENST00000491165 YAE1D1Q9NRH1 226 aa18.03■□□□□ 0.48
USF3-203ENST00000491165 A0A1W2PN81 502 aa18.02■□□□□ 0.48
USF3-203ENST00000491165 PSMB11A5LHX3 300 aa18.02■□□□□ 0.48
USF3-203ENST00000491165 IGLV2-8P01709 118 aa18.02■□□□□ 0.48
USF3-203ENST00000491165 UBE2L3P68036 154 aaKnown RBP18.02■□□□□ 0.48
USF3-203ENST00000491165 TBL2Q9Y4P3 447 aaKnown RBP18.02■□□□□ 0.48
USF3-203ENST00000491165 NSD1Q96L73 2696 aaPredicted RBP18.02■□□□□ 0.48
USF3-203ENST00000491165 F2Z2F3 143 aa18.02■□□□□ 0.47
USF3-203ENST00000491165 MGST1P10620 155 aaKnown RBP18.02■□□□□ 0.47
USF3-203ENST00000491165 CD33P20138 364 aa18.02■□□□□ 0.47
USF3-203ENST00000491165 FAM120AOSQ5T036 256 aa18.02■□□□□ 0.47
USF3-203ENST00000491165 IBA57Q5T440 356 aaKnown RBP18.02■□□□□ 0.47
USF3-203ENST00000491165 MINOS1Q5TGZ0 78 aa18.02■□□□□ 0.47
USF3-203ENST00000491165 FAM167A-AS1Q96KT0 104 aa18.02■□□□□ 0.47
USF3-203ENST00000491165 DNAJC4Q9NNZ3 241 aa18.02■□□□□ 0.47
USF3-203ENST00000491165 MINOS1-NBL1R4GNA1 71 aa18.02■□□□□ 0.47
USF3-203ENST00000491165 SPINK4O60575 86 aa18.01■□□□□ 0.47
USF3-203ENST00000491165 CD24P25063 80 aa18.01■□□□□ 0.47
USF3-203ENST00000491165 FAM71F2Q6NXP2 309 aa18.01■□□□□ 0.47
USF3-203ENST00000491165 Q71RC1 249 aaPredicted RBP18.01■□□□□ 0.47
USF3-203ENST00000491165 OR4A5Q8NH83 315 aa18.01■□□□□ 0.47
USF3-203ENST00000491165 SNHG12Q9BXW3 62 aa18.01■□□□□ 0.47
USF3-203ENST00000491165 GSX1Q9H4S2 264 aaPredicted RBP18.01■□□□□ 0.47
USF3-203ENST00000491165 MORN5Q5VZ52 161 aa18.01■□□□□ 0.47
USF3-203ENST00000491165 TEX43Q6ZNM6 134 aa18.01■□□□□ 0.47
USF3-203ENST00000491165 TMEM136Q6ZRR5 245 aa18.01■□□□□ 0.47
USF3-203ENST00000491165 OR4C13Q8NGP0 309 aa18.01■□□□□ 0.47
USF3-203ENST00000491165 VSTM2AQ8TAG5 236 aa18.01■□□□□ 0.47
USF3-203ENST00000491165 TMEM167AQ8TBQ9 72 aa18.01■□□□□ 0.47
USF3-203ENST00000491165 CFHR4Q92496 578 aa18.01■□□□□ 0.47
USF3-203ENST00000491165 GNB4Q9HAV0 340 aa18.01■□□□□ 0.47
USF3-203ENST00000491165 HIVEP2P31629 2446 aa18■□□□□ 0.47
USF3-203ENST00000491165 TRAV5A0A0B4J249 113 aa18■□□□□ 0.47
USF3-203ENST00000491165 TIMM23O14925 209 aa18■□□□□ 0.47
USF3-203ENST00000491165 TCL1AP56279 114 aa18■□□□□ 0.47
USF3-203ENST00000491165 NUTF2P61970 127 aaKnown RBP18■□□□□ 0.47
USF3-203ENST00000491165 SMIM27A0A1W2PRY6 76 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms