RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 C9orf139Q6ZV77 190 aa10.82□□□□□ -0.68
SMPD4-219ENST00000491128 CBLN2Q8IUK8 224 aa10.82□□□□□ -0.68
SMPD4-219ENST00000491128 ZNF491Q8N8L2 437 aa10.82□□□□□ -0.68
SMPD4-219ENST00000491128 DERL1Q9BUN8 251 aa10.82□□□□□ -0.68
SMPD4-219ENST00000491128 TECRQ9NZ01 308 aaKnown RBP10.82□□□□□ -0.68
SMPD4-219ENST00000491128 SELENOKQ9Y6D0 94 aa10.82□□□□□ -0.68
SMPD4-219ENST00000491128 NPPCP23582 126 aa10.81□□□□□ -0.68
SMPD4-219ENST00000491128 ZNF502Q8TBZ5 544 aa10.81□□□□□ -0.68
SMPD4-219ENST00000491128 AURKAIP1Q9NWT8 199 aaPredicted RBP10.81□□□□□ -0.68
SMPD4-219ENST00000491128 IGHV3-49A0A0A0MS15 119 aa10.81□□□□□ -0.68
SMPD4-219ENST00000491128 IGHV3-66A0A0C4DH42 116 aa10.81□□□□□ -0.68
SMPD4-219ENST00000491128 M0QZK8 103 aa10.81□□□□□ -0.68
SMPD4-219ENST00000491128 AP4M1O00189 453 aa10.81□□□□□ -0.68
SMPD4-219ENST00000491128 CD5LO43866 347 aa10.81□□□□□ -0.68
SMPD4-219ENST00000491128 FCGR2BP31994 310 aaPredicted RBP10.81□□□□□ -0.68
SMPD4-219ENST00000491128 NECAP1Q8NC96 275 aa10.81□□□□□ -0.68
SMPD4-219ENST00000491128 M0R036 132 aa10.8□□□□□ -0.68
SMPD4-219ENST00000491128 IFNA1P01562 189 aa10.8□□□□□ -0.68
SMPD4-219ENST00000491128 UBE2L3P68036 154 aaKnown RBP10.8□□□□□ -0.68
SMPD4-219ENST00000491128 ATP5G2Q06055 141 aa10.8□□□□□ -0.68
SMPD4-219ENST00000491128 C10orf91Q5T1B1 145 aa10.8□□□□□ -0.68
SMPD4-219ENST00000491128 FAM90A2PQ658T7 463 aa10.8□□□□□ -0.68
SMPD4-219ENST00000491128 OR1L4Q8NGR5 311 aa10.8□□□□□ -0.68
SMPD4-219ENST00000491128 RNF125Q96EQ8 232 aa10.8□□□□□ -0.68
SMPD4-219ENST00000491128 PFDN5Q99471 154 aa10.8□□□□□ -0.68
SMPD4-219ENST00000491128 ESM1Q9NQ30 184 aa10.8□□□□□ -0.68
SMPD4-219ENST00000491128 OR5R1Q8NH85 324 aa10.8□□□□□ -0.68
SMPD4-219ENST00000491128 SLC25A39Q9BZJ4 359 aaPredicted RBP10.8□□□□□ -0.68
SMPD4-219ENST00000491128 BIN3Q9NQY0 253 aa10.8□□□□□ -0.68
SMPD4-219ENST00000491128 HIGD1AQ9Y241 93 aa10.8□□□□□ -0.68
SMPD4-219ENST00000491128 CARHSP1Q9Y2V2 147 aaKnown RBP10.8□□□□□ -0.68
SMPD4-219ENST00000491128 SRSF2Q01130 221 aaKnown RBP10.79□□□□□ -0.68
SMPD4-219ENST00000491128 SVBPQ8N300 66 aa10.79□□□□□ -0.68
SMPD4-219ENST00000491128 ZNF414Q96IQ9 312 aa10.79□□□□□ -0.68
SMPD4-219ENST00000491128 PAXXQ9BUH6 204 aa10.79□□□□□ -0.68
SMPD4-219ENST00000491128 SCO2A0A1W2PP80 73 aa10.79□□□□□ -0.68
SMPD4-219ENST00000491128 FAM181BA6NEQ2 426 aa10.79□□□□□ -0.68
SMPD4-219ENST00000491128 PGPEP1LA6NFU8 196 aa10.79□□□□□ -0.68
SMPD4-219ENST00000491128 TOMM40O96008 361 aa10.79□□□□□ -0.68
SMPD4-219ENST00000491128 HIST1H1BP16401 226 aaKnown RBP10.79□□□□□ -0.68
SMPD4-219ENST00000491128 C17orf77Q96MU5 243 aa10.79□□□□□ -0.68
SMPD4-219ENST00000491128 OR51M1Q9H341 326 aa10.79□□□□□ -0.68
SMPD4-219ENST00000491128 ELOA3CA0A087WX78 387 aaPredicted RBP10.78□□□□□ -0.68
SMPD4-219ENST00000491128 LINC00587B1AMM8 73 aa10.78□□□□□ -0.68
SMPD4-219ENST00000491128 H3BQ15 152 aa10.78□□□□□ -0.68
SMPD4-219ENST00000491128 NDUFB4O95168 129 aa10.78□□□□□ -0.68
SMPD4-219ENST00000491128 LY6G6DO95868 133 aa10.78□□□□□ -0.68
SMPD4-219ENST00000491128 TAS2R45P59539 299 aa10.78□□□□□ -0.68
SMPD4-219ENST00000491128 RPL15P61313 204 aaKnown RBP10.78□□□□□ -0.68
SMPD4-219ENST00000491128 RANP62826 216 aaKnown RBP10.78□□□□□ -0.68
SMPD4-219ENST00000491128 SUMO1P63165 101 aaKnown RBP10.78□□□□□ -0.68
SMPD4-219ENST00000491128 Q8WTZ3 238 aa10.78□□□□□ -0.68
SMPD4-219ENST00000491128 ZNF702PQ9H963 129 aa10.78□□□□□ -0.68
SMPD4-219ENST00000491128 MANBALQ9NQG1 85 aa10.78□□□□□ -0.68
SMPD4-219ENST00000491128 HNF1AP20823 631 aa10.78□□□□□ -0.68
SMPD4-219ENST00000491128 AWAT1Q58HT5 328 aa10.78□□□□□ -0.68
SMPD4-219ENST00000491128 EEF1AKMT3Q96AZ1 226 aa10.78□□□□□ -0.68
SMPD4-219ENST00000491128 TMEM68Q96MH6 324 aa10.78□□□□□ -0.68
SMPD4-219ENST00000491128 MRPL27Q9P0M9 148 aaKnown RBP10.78□□□□□ -0.68
SMPD4-219ENST00000491128 BAHCC1Q9P281 2608 aa10.78□□□□□ -0.68
SMPD4-219ENST00000491128 DNAJC9-AS1A6NH13 148 aa10.77□□□□□ -0.68
SMPD4-219ENST00000491128 GGTLC3B5MD39 225 aa10.77□□□□□ -0.68
SMPD4-219ENST00000491128 RAB9AP51151 201 aa10.77□□□□□ -0.68
SMPD4-219ENST00000491128 PQLC2Q6ZP29 291 aa10.77□□□□□ -0.68
SMPD4-219ENST00000491128 VN1R17PQ8TDU5 208 aa10.77□□□□□ -0.68
SMPD4-219ENST00000491128 C2CD4CQ8TF44 421 aa10.77□□□□□ -0.68
SMPD4-219ENST00000491128 FXYD5Q96DB9 178 aa10.77□□□□□ -0.68
SMPD4-219ENST00000491128 SGK494Q96LW2 274 aa10.77□□□□□ -0.68
SMPD4-219ENST00000491128 MRPL32Q9BYC8 188 aaKnown RBP10.77□□□□□ -0.68
SMPD4-219ENST00000491128 PARLQ9H300 379 aa10.77□□□□□ -0.68
SMPD4-219ENST00000491128 OR2C1O95371 312 aa10.77□□□□□ -0.69
SMPD4-219ENST00000491128 TOMM20LQ6UXN7 152 aa10.77□□□□□ -0.69
SMPD4-219ENST00000491128 C19orf24Q9BVV8 132 aa10.77□□□□□ -0.69
SMPD4-219ENST00000491128 RPH3ALQ9UNE2 315 aa10.77□□□□□ -0.69
SMPD4-219ENST00000491128 NIPBLQ6KC79 2804 aaeCLIP10.77□□□□□ -0.69
SMPD4-219ENST00000491128 WI2-2373I1.2A0A1W2PRP0 233 aa10.76□□□□□ -0.69
SMPD4-219ENST00000491128 ZNF727A8MUV8 499 aa10.76□□□□□ -0.69
SMPD4-219ENST00000491128 APOHP02749 345 aaPredicted RBP10.76□□□□□ -0.69
SMPD4-219ENST00000491128 RPLP1P05386 114 aaKnown RBP10.76□□□□□ -0.69
SMPD4-219ENST00000491128 CRIP2P52943 208 aaPredicted RBP10.76□□□□□ -0.69
SMPD4-219ENST00000491128 ZFP82Q8N141 532 aa10.76□□□□□ -0.69
SMPD4-219ENST00000491128 LINC00479Q96M42 142 aa10.76□□□□□ -0.69
SMPD4-219ENST00000491128 RPS10P5Q9NQ39 176 aa10.76□□□□□ -0.69
SMPD4-219ENST00000491128 FN1P02751 2386 aaKnown RBP10.76□□□□□ -0.69
SMPD4-219ENST00000491128 TRAV30A0A087WSZ9 112 aa10.76□□□□□ -0.69
SMPD4-219ENST00000491128 TGOLN2O43493 480 aa10.76□□□□□ -0.69
SMPD4-219ENST00000491128 CRYBA1P05813 215 aa10.76□□□□□ -0.69
SMPD4-219ENST00000491128 FOSL1P15407 271 aa10.76□□□□□ -0.69
SMPD4-219ENST00000491128 CRYBB3P26998 211 aa10.76□□□□□ -0.69
SMPD4-219ENST00000491128 YPEL3P61236 119 aaPredicted RBP10.76□□□□□ -0.69
SMPD4-219ENST00000491128 CFHR3Q02985 330 aa10.76□□□□□ -0.69
SMPD4-219ENST00000491128 FAM209BQ5JX69 171 aa10.76□□□□□ -0.69
SMPD4-219ENST00000491128 ZNF600Q6ZNG1 722 aa10.76□□□□□ -0.69
SMPD4-219ENST00000491128 SMIM7Q9BQ49 75 aa10.76□□□□□ -0.69
SMPD4-219ENST00000491128 PRSS22Q9GZN4 317 aa10.76□□□□□ -0.69
SMPD4-219ENST00000491128 IGLV1-40P01703 118 aa10.75□□□□□ -0.69
SMPD4-219ENST00000491128 PLP1P60201 277 aa10.75□□□□□ -0.69
SMPD4-219ENST00000491128 GNG5P63218 68 aa10.75□□□□□ -0.69
SMPD4-219ENST00000491128 C11orf44Q8N8P7 122 aa10.75□□□□□ -0.69
SMPD4-219ENST00000491128 NPFFR1Q9GZQ6 430 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms