RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 OR1S1Q8NH92 325 aa11.81□□□□□ -0.52
SRGAP3-209ENST00000490889 COQ8AQ8NI60 647 aa11.81□□□□□ -0.52
SRGAP3-209ENST00000490889 C20orf173Q96LM9 149 aa11.81□□□□□ -0.52
SRGAP3-209ENST00000490889 MCUBQ9NWR8 336 aa11.81□□□□□ -0.52
SRGAP3-209ENST00000490889 SCP2D1Q9UJQ7 156 aa11.81□□□□□ -0.52
SRGAP3-209ENST00000490889 ABCA13Q86UQ4 5058 aa11.8□□□□□ -0.52
SRGAP3-209ENST00000490889 PITX3O75364 302 aa11.8□□□□□ -0.52
SRGAP3-209ENST00000490889 IAPPP10997 89 aa11.8□□□□□ -0.52
SRGAP3-209ENST00000490889 PAX9P55771 341 aa11.8□□□□□ -0.52
SRGAP3-209ENST00000490889 FAM78BQ5VT40 261 aa11.8□□□□□ -0.52
SRGAP3-209ENST00000490889 TRGV9Q99603 122 aa11.8□□□□□ -0.52
SRGAP3-209ENST00000490889 NIPSNAP3BQ9BS92 247 aa11.8□□□□□ -0.52
SRGAP3-209ENST00000490889 MRPS26Q9BYN8 205 aaKnown RBP11.8□□□□□ -0.52
SRGAP3-209ENST00000490889 CCDC59Q9P031 241 aaKnown RBP11.8□□□□□ -0.52
SRGAP3-209ENST00000490889 A0A0J9YX75 114 aa11.79□□□□□ -0.52
SRGAP3-209ENST00000490889 SNRPGP15A8MWD9 76 aa11.79□□□□□ -0.52
SRGAP3-209ENST00000490889 MED14OSP0DP75 135 aa11.79□□□□□ -0.52
SRGAP3-209ENST00000490889 ATP5IP56385 69 aaPredicted RBP11.79□□□□□ -0.52
SRGAP3-209ENST00000490889 PSG9Q00887 426 aa11.79□□□□□ -0.52
SRGAP3-209ENST00000490889 Q6ZR54 194 aa11.79□□□□□ -0.52
SRGAP3-209ENST00000490889 OR8I2Q8N0Y5 310 aa11.79□□□□□ -0.52
SRGAP3-209ENST00000490889 THAP8Q8NA92 274 aa11.79□□□□□ -0.52
SRGAP3-209ENST00000490889 SCGB3A2Q96PL1 93 aa11.79□□□□□ -0.52
SRGAP3-209ENST00000490889 SOSTQ9BQB4 213 aa11.79□□□□□ -0.52
SRGAP3-209ENST00000490889 SLC25A32Q9H2D1 315 aa11.79□□□□□ -0.52
SRGAP3-209ENST00000490889 RABL2AQ9UBK7 228 aaPredicted RBP11.79□□□□□ -0.52
SRGAP3-209ENST00000490889 PFDN2Q9UHV9 154 aa11.79□□□□□ -0.52
SRGAP3-209ENST00000490889 RABL2BQ9UNT1 228 aa11.79□□□□□ -0.52
SRGAP3-209ENST00000490889 YTHDF2Q9Y5A9 579 aaKnown RBP11.79□□□□□ -0.52
SRGAP3-209ENST00000490889 LOC102723971A0A1B0GUV8 181 aa11.78□□□□□ -0.52
SRGAP3-209ENST00000490889 ISLRO14498 428 aa11.78□□□□□ -0.52
SRGAP3-209ENST00000490889 HTN3P15516 51 aa11.78□□□□□ -0.52
SRGAP3-209ENST00000490889 SRPXP78539 464 aa11.78□□□□□ -0.52
SRGAP3-209ENST00000490889 UBE2DNLQ8IWF7 75 aa11.78□□□□□ -0.52
SRGAP3-209ENST00000490889 PPP1R14BQ96C90 147 aa11.78□□□□□ -0.52
SRGAP3-209ENST00000490889 FAM210BQ96KR6 192 aa11.78□□□□□ -0.52
SRGAP3-209ENST00000490889 SLIRPQ9GZT3 109 aaKnown RBP11.78□□□□□ -0.52
SRGAP3-209ENST00000490889 GOLT1BQ9Y3E0 138 aa11.78□□□□□ -0.52
SRGAP3-209ENST00000490889 NACAE9PAV3 2078 aa11.78□□□□□ -0.52
SRGAP3-209ENST00000490889 A8MTW9 85 aa11.77□□□□□ -0.53
SRGAP3-209ENST00000490889 PRSS46E5RG02 174 aa11.77□□□□□ -0.53
SRGAP3-209ENST00000490889 IFNA21P01568 189 aa11.77□□□□□ -0.53
SRGAP3-209ENST00000490889 PRM2P04554 102 aa11.77□□□□□ -0.53
SRGAP3-209ENST00000490889 FABP1P07148 127 aa11.77□□□□□ -0.53
SRGAP3-209ENST00000490889 ANXA3P12429 323 aa11.77□□□□□ -0.53
SRGAP3-209ENST00000490889 SPATA31B1PQ5VZV4 182 aa11.77□□□□□ -0.53
SRGAP3-209ENST00000490889 EBLN2Q6P2I7 272 aa11.77□□□□□ -0.53
SRGAP3-209ENST00000490889 AMTNQ6UX39 209 aa11.77□□□□□ -0.53
SRGAP3-209ENST00000490889 TMEM182Q6ZP80 229 aaPredicted RBP11.77□□□□□ -0.53
SRGAP3-209ENST00000490889 TMED4Q7Z7H5 227 aa11.77□□□□□ -0.53
SRGAP3-209ENST00000490889 RSL24D1Q9UHA3 163 aaKnown RBP11.77□□□□□ -0.53
SRGAP3-209ENST00000490889 TEX48A0A1B0GUV7 120 aa11.76□□□□□ -0.53
SRGAP3-209ENST00000490889 HBE1P02100 147 aa11.76□□□□□ -0.53
SRGAP3-209ENST00000490889 GATA2P23769 480 aaPredicted RBP11.76□□□□□ -0.53
SRGAP3-209ENST00000490889 TNFSF8P32971 234 aa11.76□□□□□ -0.53
SRGAP3-209ENST00000490889 OXA1LQ15070 435 aa11.76□□□□□ -0.53
SRGAP3-209ENST00000490889 TMEM88Q6PEY1 159 aa11.76□□□□□ -0.53
SRGAP3-209ENST00000490889 RAB2BQ8WUD1 216 aa11.76□□□□□ -0.53
SRGAP3-209ENST00000490889 C16orf92Q96LL3 132 aa11.76□□□□□ -0.53
SRGAP3-209ENST00000490889 C7orf50Q9BRJ6 194 aaKnown RBP11.76□□□□□ -0.53
SRGAP3-209ENST00000490889 SLC25A22Q9H936 323 aa11.76□□□□□ -0.53
SRGAP3-209ENST00000490889 DOK5Q9P104 306 aa11.76□□□□□ -0.53
SRGAP3-209ENST00000490889 PAIP2BQ9ULR5 123 aaKnown RBP11.76□□□□□ -0.53
SRGAP3-209ENST00000490889 HSPG2P98160 4391 aa11.75□□□□□ -0.53
SRGAP3-209ENST00000490889 DUXBA0A1W2PPF3 345 aa11.75□□□□□ -0.53
SRGAP3-209ENST00000490889 ZNF98A6NK75 572 aa11.75□□□□□ -0.53
SRGAP3-209ENST00000490889 RAB11AP62491 216 aa11.75□□□□□ -0.53
SRGAP3-209ENST00000490889 RRN3P1Q2M238 152 aa11.75□□□□□ -0.53
SRGAP3-209ENST00000490889 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.75□□□□□ -0.53
SRGAP3-209ENST00000490889 TRIM63Q969Q1 353 aa11.75□□□□□ -0.53
SRGAP3-209ENST00000490889 RSG1Q9BU20 258 aa11.75□□□□□ -0.53
SRGAP3-209ENST00000490889 MAGT1Q9H0U3 335 aa11.75□□□□□ -0.53
SRGAP3-209ENST00000490889 RPRMQ9NS64 109 aa11.75□□□□□ -0.53
SRGAP3-209ENST00000490889 FABP12A6NFH5 140 aa11.74□□□□□ -0.53
SRGAP3-209ENST00000490889 CRXO43186 299 aaPredicted RBP11.74□□□□□ -0.53
SRGAP3-209ENST00000490889 MEOX2P50222 304 aa11.74□□□□□ -0.53
SRGAP3-209ENST00000490889 TMEM128Q5BJH2 165 aa11.74□□□□□ -0.53
SRGAP3-209ENST00000490889 IGFL4Q6B9Z1 124 aa11.74□□□□□ -0.53
SRGAP3-209ENST00000490889 ZNF575Q86XF7 245 aa11.74□□□□□ -0.53
SRGAP3-209ENST00000490889 LRTM2Q8N967 370 aa11.74□□□□□ -0.53
SRGAP3-209ENST00000490889 LRP1BQ9NZR2 4599 aa11.74□□□□□ -0.53
SRGAP3-209ENST00000490889 MUC4Q99102 2169 aa11.74□□□□□ -0.53
SRGAP3-209ENST00000490889 TRAV8-2A0A0B4J237 113 aa11.73□□□□□ -0.53
SRGAP3-209ENST00000490889 SLC25A6P12236 298 aa11.73□□□□□ -0.53
SRGAP3-209ENST00000490889 VAMP1P23763 118 aa11.73□□□□□ -0.53
SRGAP3-209ENST00000490889 GALR1P47211 349 aa11.73□□□□□ -0.53
SRGAP3-209ENST00000490889 CNN1P51911 297 aaKnown RBP11.73□□□□□ -0.53
SRGAP3-209ENST00000490889 TMBIM6P55061 237 aa11.73□□□□□ -0.53
SRGAP3-209ENST00000490889 DAD1P61803 113 aa11.73□□□□□ -0.53
SRGAP3-209ENST00000490889 RNF212Q495C1 297 aa11.73□□□□□ -0.53
SRGAP3-209ENST00000490889 IGF2BP2-AS1Q96M15 143 aa11.73□□□□□ -0.53
SRGAP3-209ENST00000490889 SLC45A2Q9UMX9 530 aa11.73□□□□□ -0.53
SRGAP3-209ENST00000490889 ZNF705GA8MUZ8 300 aaPredicted RBP11.72□□□□□ -0.53
SRGAP3-209ENST00000490889 H3BMQ9 156 aa11.72□□□□□ -0.53
SRGAP3-209ENST00000490889 H3BP45 60 aa11.72□□□□□ -0.53
SRGAP3-209ENST00000490889 M0R2Z0 102 aa11.72□□□□□ -0.53
SRGAP3-209ENST00000490889 WRBO00258 174 aa11.72□□□□□ -0.53
SRGAP3-209ENST00000490889 SYNGR2O43760 224 aa11.72□□□□□ -0.53
SRGAP3-209ENST00000490889 ORM2P19652 201 aa11.72□□□□□ -0.53
SRGAP3-209ENST00000490889 SPINK13Q1W4C9 94 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms