RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 CLN5O75503 358 aa5.82□□□□□ -1.48
CLDN1-202ENST00000490800 MBP02144 154 aa5.82□□□□□ -1.48
CLDN1-202ENST00000490800 IGLC1P0CG04 106 aa5.82□□□□□ -1.48
CLDN1-202ENST00000490800 GATA2P23769 480 aaPredicted RBP5.82□□□□□ -1.48
CLDN1-202ENST00000490800 PPIFP30405 207 aaKnown RBP5.82□□□□□ -1.48
CLDN1-202ENST00000490800 B2MP61769 119 aa5.82□□□□□ -1.48
CLDN1-202ENST00000490800 SLC35B1P78383 322 aa5.82□□□□□ -1.48
CLDN1-202ENST00000490800 RHOGP84095 191 aa5.82□□□□□ -1.48
CLDN1-202ENST00000490800 CFHR3Q02985 330 aa5.82□□□□□ -1.48
CLDN1-202ENST00000490800 ZNF726P1Q15940 193 aa5.82□□□□□ -1.48
CLDN1-202ENST00000490800 ACOT6Q3I5F7 207 aaPredicted RBP5.82□□□□□ -1.48
CLDN1-202ENST00000490800 GCSAMLQ5JQS6 135 aa5.82□□□□□ -1.48
CLDN1-202ENST00000490800 COMMD7Q86VX2 200 aa5.82□□□□□ -1.48
CLDN1-202ENST00000490800 BPIFCQ8NFQ6 507 aa5.82□□□□□ -1.48
CLDN1-202ENST00000490800 LYPD6BQ8NI32 183 aa5.82□□□□□ -1.48
CLDN1-202ENST00000490800 VN1R17PQ8TDU5 208 aa5.82□□□□□ -1.48
CLDN1-202ENST00000490800 DUX3Q96PT4 197 aa5.82□□□□□ -1.48
CLDN1-202ENST00000490800 ZNF355PQ9NSJ1 428 aa5.82□□□□□ -1.48
CLDN1-202ENST00000490800 SLC39A9Q9NUM3 307 aa5.82□□□□□ -1.48
CLDN1-202ENST00000490800 MED9Q9NWA0 146 aa5.82□□□□□ -1.48
CLDN1-202ENST00000490800 THYN1Q9P016 225 aa5.82□□□□□ -1.48
CLDN1-202ENST00000490800 S4R3C0 116 aa5.82□□□□□ -1.48
CLDN1-202ENST00000490800 ZFP92A6NM28 416 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 SEC14L6B5MCN3 397 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 H3BUA1 57 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 BRI3O95415 125 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 IGKV1-17P01599 117 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 M6PRP20645 277 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 MALP21145 153 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 FCGR2BP31994 310 aaPredicted RBP5.81□□□□□ -1.48
CLDN1-202ENST00000490800 MYCNOSP40205 109 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 MFAP4P55083 255 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 SELENOTP62341 195 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 ZNF90Q03938 601 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 ZNF616Q08AN1 781 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 EGFEM1PQ0D2K5 195 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 C15orf32Q32M92 178 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 TIGITQ495A1 244 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 FAM122CQ6P4D5 195 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 TEX38Q6PEX7 206 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 SPSB3Q6PJ21 355 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 LCNL1Q6ZST4 164 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 SSX7Q7RTT5 188 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 RPP25LQ8N5L8 163 aaKnown RBP5.81□□□□□ -1.48
CLDN1-202ENST00000490800 COMMD1Q8N668 190 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 NECAP1Q8NC96 275 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 KLHL30-AS1Q8NEE0 82 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 OR10G4Q8NGN3 311 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 OR10G9Q8NGN4 311 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 OR10G7Q8NGN6 311 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 ZNF502Q8TBZ5 544 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 MBD3L1Q8WWY6 194 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 MS4A10Q96PG2 267 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 HRH4Q9H3N8 390 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 C21orf62Q9NYP8 219 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 DNAH9Q9NYC9 4486 aa5.81□□□□□ -1.48
CLDN1-202ENST00000490800 TRAV1-1A0A0B4J248 108 aa5.8□□□□□ -1.48
CLDN1-202ENST00000490800 CTXND1A0A1B0GTU2 59 aa5.8□□□□□ -1.48
CLDN1-202ENST00000490800 A0A1B0GV50 99 aa5.8□□□□□ -1.48
CLDN1-202ENST00000490800 FAM223BA6NKX1 122 aa5.8□□□□□ -1.48
CLDN1-202ENST00000490800 EIF3GO75821 320 aaKnown RBP eCLIP5.8□□□□□ -1.48
CLDN1-202ENST00000490800 IGHV3-23P01764 117 aa5.8□□□□□ -1.48
CLDN1-202ENST00000490800 TRGV3P03979 118 aa5.8□□□□□ -1.48
CLDN1-202ENST00000490800 NPBWR1P48145 328 aa5.8□□□□□ -1.48
CLDN1-202ENST00000490800 CCL20P78556 96 aa5.8□□□□□ -1.48
CLDN1-202ENST00000490800 ATP5G2Q06055 141 aa5.8□□□□□ -1.48
CLDN1-202ENST00000490800 Q56UQ5 140 aa5.8□□□□□ -1.48
CLDN1-202ENST00000490800 SPATA31B1PQ5VZV4 182 aa5.8□□□□□ -1.48
CLDN1-202ENST00000490800 LCN15Q6UWW0 184 aa5.8□□□□□ -1.48
CLDN1-202ENST00000490800 FAM223AQ8IWN6 122 aa5.8□□□□□ -1.48
CLDN1-202ENST00000490800 SFT2D1Q8WV19 159 aa5.8□□□□□ -1.48
CLDN1-202ENST00000490800 TXN2Q99757 166 aa5.8□□□□□ -1.48
CLDN1-202ENST00000490800 KRTAP9-9Q9BYP9 154 aa5.8□□□□□ -1.48
CLDN1-202ENST00000490800 KRTAP9-4Q9BYQ2 154 aa5.8□□□□□ -1.48
CLDN1-202ENST00000490800 ACTR3CQ9C0K3 210 aaPredicted RBP5.8□□□□□ -1.48
CLDN1-202ENST00000490800 KLK15Q9H2R5 256 aa5.8□□□□□ -1.48
CLDN1-202ENST00000490800 SLC25A22Q9H936 323 aa5.8□□□□□ -1.48
CLDN1-202ENST00000490800 TRAV30A0A087WSZ9 112 aa5.79□□□□□ -1.48
CLDN1-202ENST00000490800 MAP1LC3B2A6NCE7 125 aa5.79□□□□□ -1.48
CLDN1-202ENST00000490800 CCL24O00175 119 aa5.79□□□□□ -1.48
CLDN1-202ENST00000490800 GNG7O60262 68 aa5.79□□□□□ -1.48
CLDN1-202ENST00000490800 ATP6V1G1O75348 118 aa5.79□□□□□ -1.48
CLDN1-202ENST00000490800 TOMM40O96008 361 aa5.79□□□□□ -1.48
CLDN1-202ENST00000490800 IGHG4P01861 327 aa5.79□□□□□ -1.48
CLDN1-202ENST00000490800 HBE1P02100 147 aa5.79□□□□□ -1.48
CLDN1-202ENST00000490800 ELANEP08246 267 aa5.79□□□□□ -1.48
CLDN1-202ENST00000490800 OR5G3P0C626 314 aa5.79□□□□□ -1.48
CLDN1-202ENST00000490800 PSG1P11464 419 aa5.79□□□□□ -1.48
CLDN1-202ENST00000490800 CDX1P47902 265 aaPredicted RBP5.79□□□□□ -1.48
CLDN1-202ENST00000490800 CDC34P49427 236 aaPredicted RBP5.79□□□□□ -1.48
CLDN1-202ENST00000490800 FGF8P55075 233 aaPredicted RBP5.79□□□□□ -1.48
CLDN1-202ENST00000490800 TPPP2P59282 170 aa5.79□□□□□ -1.48
CLDN1-202ENST00000490800 DEFB136Q30KP8 78 aa5.79□□□□□ -1.48
CLDN1-202ENST00000490800 PATE2Q6UY27 113 aa5.79□□□□□ -1.48
CLDN1-202ENST00000490800 IL34Q6ZMJ4 242 aa5.79□□□□□ -1.48
CLDN1-202ENST00000490800 TMEM37Q8WXS4 190 aa5.79□□□□□ -1.48
CLDN1-202ENST00000490800 DPF1Q92782 380 aa5.79□□□□□ -1.48
CLDN1-202ENST00000490800 MARC2Q969Z3 335 aa5.79□□□□□ -1.48
CLDN1-202ENST00000490800 EEF1AKMT3Q96AZ1 226 aa5.79□□□□□ -1.48
CLDN1-202ENST00000490800 ZNF414Q96IQ9 312 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms