RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 GSKIPQ9P0R6 139 aa14.41□□□□□ -0.1
SMC4-222ENST00000490207 RCL1Q9Y2P8 373 aaKnown RBP14.41□□□□□ -0.1
SMC4-222ENST00000490207 CCNKO75909 580 aa14.4□□□□□ -0.1
SMC4-222ENST00000490207 GATA2P23769 480 aaPredicted RBP14.4□□□□□ -0.1
SMC4-222ENST00000490207 PAX9P55771 341 aa14.4□□□□□ -0.1
SMC4-222ENST00000490207 TMEM14EPQ6UXP3 125 aa14.4□□□□□ -0.1
SMC4-222ENST00000490207 OR8I2Q8N0Y5 310 aa14.4□□□□□ -0.1
SMC4-222ENST00000490207 SEC22CQ9BRL7 303 aa14.4□□□□□ -0.1
SMC4-222ENST00000490207 WDR12Q9GZL7 423 aaKnown RBP14.4□□□□□ -0.1
SMC4-222ENST00000490207 SLC45A2Q9UMX9 530 aa14.4□□□□□ -0.1
SMC4-222ENST00000490207 TSC22D2O75157 780 aa14.39□□□□□ -0.11
SMC4-222ENST00000490207 METTL15P1P0C7V9 234 aa14.39□□□□□ -0.11
SMC4-222ENST00000490207 ID1P41134 155 aa14.39□□□□□ -0.11
SMC4-222ENST00000490207 PSMB3P49720 205 aa14.39□□□□□ -0.11
SMC4-222ENST00000490207 RRAS2P62070 204 aaPredicted RBP14.39□□□□□ -0.11
SMC4-222ENST00000490207 DLK1P80370 383 aa14.39□□□□□ -0.11
SMC4-222ENST00000490207 ZNF846Q147U1 533 aa14.39□□□□□ -0.11
SMC4-222ENST00000490207 TMEM182Q6ZP80 229 aaPredicted RBP14.39□□□□□ -0.11
SMC4-222ENST00000490207 ZNF431Q8TF32 576 aaPredicted RBP14.39□□□□□ -0.11
SMC4-222ENST00000490207 SOCS3O14543 225 aa14.38□□□□□ -0.11
SMC4-222ENST00000490207 H2AFB2P0C5Z0 115 aa14.38□□□□□ -0.11
SMC4-222ENST00000490207 HLA-DRB4P13762 266 aa14.38□□□□□ -0.11
SMC4-222ENST00000490207 ORM2P19652 201 aa14.38□□□□□ -0.11
SMC4-222ENST00000490207 TAS2R30P59541 319 aa14.38□□□□□ -0.11
SMC4-222ENST00000490207 CYP2G1PQ6ZSU1 146 aa14.38□□□□□ -0.11
SMC4-222ENST00000490207 OR1B1Q8NGR6 318 aa14.38□□□□□ -0.11
SMC4-222ENST00000490207 LINC00052Q96N35 136 aa14.38□□□□□ -0.11
SMC4-222ENST00000490207 TMEM147Q9BVK8 224 aa14.38□□□□□ -0.11
SMC4-222ENST00000490207 SLC25A32Q9H2D1 315 aa14.38□□□□□ -0.11
SMC4-222ENST00000490207 SLC25A22Q9H936 323 aa14.38□□□□□ -0.11
SMC4-222ENST00000490207 CLEC5AQ9NY25 188 aa14.38□□□□□ -0.11
SMC4-222ENST00000490207 MGAT4CQ9UBM8 478 aa14.38□□□□□ -0.11
SMC4-222ENST00000490207 HLA-DRB4X5D2U9 266 aa14.38□□□□□ -0.11
SMC4-222ENST00000490207 FAM240BA0A1B0GVZ2 78 aa14.37□□□□□ -0.11
SMC4-222ENST00000490207 ZNF98A6NK75 572 aa14.37□□□□□ -0.11
SMC4-222ENST00000490207 FAM25EA8MYX2 175 aa14.37□□□□□ -0.11
SMC4-222ENST00000490207 H3BMM0 161 aa14.37□□□□□ -0.11
SMC4-222ENST00000490207 DEFB4AO15263 64 aa14.37□□□□□ -0.11
SMC4-222ENST00000490207 MBPP02686 304 aaPredicted RBP14.37□□□□□ -0.11
SMC4-222ENST00000490207 S100A7P31151 101 aa14.37□□□□□ -0.11
SMC4-222ENST00000490207 GALR1P47211 349 aa14.37□□□□□ -0.11
SMC4-222ENST00000490207 MZT2BQ6NZ67 158 aa14.37□□□□□ -0.11
SMC4-222ENST00000490207 CEMP1Q6PRD7 247 aaPredicted RBP14.37□□□□□ -0.11
SMC4-222ENST00000490207 Q8NAQ8 132 aa14.37□□□□□ -0.11
SMC4-222ENST00000490207 OR10P1Q8NGE3 313 aa14.37□□□□□ -0.11
SMC4-222ENST00000490207 TBC1D24Q9ULP9 559 aa14.37□□□□□ -0.11
SMC4-222ENST00000490207 FNDC10F2Z333 226 aa14.36□□□□□ -0.11
SMC4-222ENST00000490207 IL5P05113 134 aa14.36□□□□□ -0.11
SMC4-222ENST00000490207 NUTF2P61970 127 aaKnown RBP14.36□□□□□ -0.11
SMC4-222ENST00000490207 SAMD13Q5VXD3 122 aa14.36□□□□□ -0.11
SMC4-222ENST00000490207 C12orf45Q8N5I9 185 aaPredicted RBP14.36□□□□□ -0.11
SMC4-222ENST00000490207 C11orf45Q8TAV5 145 aa14.36□□□□□ -0.11
SMC4-222ENST00000490207 C1QTNF4Q9BXJ3 329 aa14.36□□□□□ -0.11
SMC4-222ENST00000490207 MFFQ9GZY8 342 aa14.36□□□□□ -0.11
SMC4-222ENST00000490207 DOK5Q9P104 306 aa14.36□□□□□ -0.11
SMC4-222ENST00000490207 KLK5Q9Y337 293 aaPredicted RBP14.36□□□□□ -0.11
SMC4-222ENST00000490207 IGHV4-28A0A0C4DH34 117 aa14.35□□□□□ -0.11
SMC4-222ENST00000490207 C7orf66A4D0T2 115 aa14.35□□□□□ -0.11
SMC4-222ENST00000490207 C5orf51A6NDU8 294 aa14.35□□□□□ -0.11
SMC4-222ENST00000490207 ZNF705EA8MWA4 302 aaPredicted RBP14.35□□□□□ -0.11
SMC4-222ENST00000490207 L7N2F9 121 aa14.35□□□□□ -0.11
SMC4-222ENST00000490207 ISLRO14498 428 aa14.35□□□□□ -0.11
SMC4-222ENST00000490207 LINC00869P0C866 280 aa14.35□□□□□ -0.11
SMC4-222ENST00000490207 MEOX2P50222 304 aa14.35□□□□□ -0.11
SMC4-222ENST00000490207 DEFB1P60022 68 aa14.35□□□□□ -0.11
SMC4-222ENST00000490207 NANOS2P60321 138 aaKnown RBP14.35□□□□□ -0.11
SMC4-222ENST00000490207 VAMP2P63027 116 aa14.35□□□□□ -0.11
SMC4-222ENST00000490207 ASAH1Q13510 395 aa14.35□□□□□ -0.11
SMC4-222ENST00000490207 GDF5OSQ5U4N7 250 aa14.35□□□□□ -0.11
SMC4-222ENST00000490207 GSG1LQ6UXU4 331 aa14.35□□□□□ -0.11
SMC4-222ENST00000490207 FOXI2Q6ZQN5 318 aa14.35□□□□□ -0.11
SMC4-222ENST00000490207 PHLDA1Q8WV24 401 aaPredicted RBP14.35□□□□□ -0.11
SMC4-222ENST00000490207 SAV1Q9H4B6 383 aaPredicted RBP14.35□□□□□ -0.11
SMC4-222ENST00000490207 NPVFQ9HCQ7 196 aa14.35□□□□□ -0.11
SMC4-222ENST00000490207 LSM5Q9Y4Y9 91 aaKnown RBP14.35□□□□□ -0.11
SMC4-222ENST00000490207 HYDINQ4G0P3 5121 aa14.34□□□□□ -0.11
SMC4-222ENST00000490207 A6NHS1 94 aa14.34□□□□□ -0.11
SMC4-222ENST00000490207 H3BRN7 92 aa14.34□□□□□ -0.11
SMC4-222ENST00000490207 K7EPK0 472 aa14.34□□□□□ -0.11
SMC4-222ENST00000490207 MIFP14174 115 aa14.34□□□□□ -0.11
SMC4-222ENST00000490207 RAP2BP61225 183 aa14.34□□□□□ -0.11
SMC4-222ENST00000490207 SELENOTP62341 195 aa14.34□□□□□ -0.11
SMC4-222ENST00000490207 TEPPQ6URK8 271 aa14.34□□□□□ -0.11
SMC4-222ENST00000490207 CSNK1G2-AS1Q8NCQ2 148 aa14.34□□□□□ -0.11
SMC4-222ENST00000490207 C16orf92Q96LL3 132 aa14.34□□□□□ -0.11
SMC4-222ENST00000490207 GPR82Q96P67 336 aa14.34□□□□□ -0.11
SMC4-222ENST00000490207 SCRT1Q9BWW7 348 aa14.34□□□□□ -0.11
SMC4-222ENST00000490207 HIGD1AQ9Y241 93 aa14.34□□□□□ -0.11
SMC4-222ENST00000490207 X6R8D5 127 aa14.34□□□□□ -0.11
SMC4-222ENST00000490207 SLC38A11Q08AI6 406 aa14.33□□□□□ -0.12
SMC4-222ENST00000490207 LINC00476Q8WZB0 136 aa14.33□□□□□ -0.12
SMC4-222ENST00000490207 RSG1Q9BU20 258 aa14.33□□□□□ -0.12
SMC4-222ENST00000490207 SLC25A39Q9BZJ4 359 aaPredicted RBP14.33□□□□□ -0.12
SMC4-222ENST00000490207 PTTG2Q9NZH5 202 aa14.33□□□□□ -0.12
SMC4-222ENST00000490207 XCL2Q9UBD3 114 aa14.33□□□□□ -0.12
SMC4-222ENST00000490207 HYPMO75409 117 aa14.32□□□□□ -0.12
SMC4-222ENST00000490207 IGKV3-20P01619 116 aa14.32□□□□□ -0.12
SMC4-222ENST00000490207 RBMY1A1P0DJD3 496 aaKnown RBP14.32□□□□□ -0.12
SMC4-222ENST00000490207 RBMY1CP0DJD4 496 aa14.32□□□□□ -0.12
SMC4-222ENST00000490207 PLP1P60201 277 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms