RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 FAM223AQ8IWN6 122 aa9.18□□□□□ -0.94
TRIM40-208ENST00000489892 NECAP1Q8NC96 275 aa9.18□□□□□ -0.94
TRIM40-208ENST00000489892 TMEM116Q8NCL8 245 aa9.18□□□□□ -0.94
TRIM40-208ENST00000489892 ZNF48Q96MX3 618 aaPredicted RBP9.18□□□□□ -0.94
TRIM40-208ENST00000489892 RNF2Q99496 336 aa9.18□□□□□ -0.94
TRIM40-208ENST00000489892 FAM103A1Q9BTL3 118 aaKnown RBP9.18□□□□□ -0.94
TRIM40-208ENST00000489892 KLK9Q9UKQ9 250 aa9.18□□□□□ -0.94
TRIM40-208ENST00000489892 LSM4Q9Y4Z0 139 aaKnown RBP9.18□□□□□ -0.94
TRIM40-208ENST00000489892 SOX21Q9Y651 276 aaPredicted RBP9.18□□□□□ -0.94
TRIM40-208ENST00000489892 PXMP4Q9Y6I8 212 aa9.18□□□□□ -0.94
TRIM40-208ENST00000489892 LY96Q9Y6Y9 160 aa9.18□□□□□ -0.94
TRIM40-208ENST00000489892 IGLV11-55A0A075B6I3 123 aa9.17□□□□□ -0.94
TRIM40-208ENST00000489892 TMEM89A2RUT3 159 aa9.17□□□□□ -0.94
TRIM40-208ENST00000489892 PCP4L1A6NKN8 68 aa9.17□□□□□ -0.94
TRIM40-208ENST00000489892 HIST1H2BKO60814 126 aa9.17□□□□□ -0.94
TRIM40-208ENST00000489892 PAGE4O60829 102 aa9.17□□□□□ -0.94
TRIM40-208ENST00000489892 GGCTO75223 188 aaKnown RBP9.17□□□□□ -0.94
TRIM40-208ENST00000489892 HIST1H2BJP06899 126 aa9.17□□□□□ -0.94
TRIM40-208ENST00000489892 PFN1P07737 140 aaKnown RBP9.17□□□□□ -0.94
TRIM40-208ENST00000489892 APELAP0DMC3 54 aa9.17□□□□□ -0.94
TRIM40-208ENST00000489892 EGR2P11161 476 aaPredicted RBP9.17□□□□□ -0.94
TRIM40-208ENST00000489892 HIST1H2BOP23527 126 aa9.17□□□□□ -0.94
TRIM40-208ENST00000489892 HIST1H2BBP33778 126 aa9.17□□□□□ -0.94
TRIM40-208ENST00000489892 GALR1P47211 349 aa9.17□□□□□ -0.94
TRIM40-208ENST00000489892 HIST1H2BDP58876 126 aa9.17□□□□□ -0.94
TRIM40-208ENST00000489892 HIST1H2BCP62807 126 aa9.17□□□□□ -0.94
TRIM40-208ENST00000489892 SLC35B1P78383 322 aa9.17□□□□□ -0.94
TRIM40-208ENST00000489892 GAMTQ14353 236 aa9.17□□□□□ -0.94
TRIM40-208ENST00000489892 HIST2H2BEQ16778 126 aa9.17□□□□□ -0.94
TRIM40-208ENST00000489892 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.17□□□□□ -0.94
TRIM40-208ENST00000489892 ZNF343Q6P1L6 599 aa9.17□□□□□ -0.94
TRIM40-208ENST00000489892 S100A7AQ86SG5 101 aa9.17□□□□□ -0.94
TRIM40-208ENST00000489892 OR4X1Q8NH49 305 aa9.17□□□□□ -0.94
TRIM40-208ENST00000489892 VN1R17PQ8TDU5 208 aa9.17□□□□□ -0.94
TRIM40-208ENST00000489892 HIST1H2BHQ93079 126 aa9.17□□□□□ -0.94
TRIM40-208ENST00000489892 RPUSD4Q96CM3 377 aaKnown RBP9.17□□□□□ -0.94
TRIM40-208ENST00000489892 ACY3Q96HD9 319 aa9.17□□□□□ -0.94
TRIM40-208ENST00000489892 UHRF2Q96PU4 802 aa9.17□□□□□ -0.94
TRIM40-208ENST00000489892 TXN2Q99757 166 aa9.17□□□□□ -0.94
TRIM40-208ENST00000489892 HIST1H2BNQ99877 126 aa9.17□□□□□ -0.94
TRIM40-208ENST00000489892 HIST1H2BMQ99879 126 aa9.17□□□□□ -0.94
TRIM40-208ENST00000489892 PPP5D1E7EU14 171 aa9.16□□□□□ -0.94
TRIM40-208ENST00000489892 S100A7P31151 101 aa9.16□□□□□ -0.94
TRIM40-208ENST00000489892 MFAP4P55083 255 aa9.16□□□□□ -0.94
TRIM40-208ENST00000489892 NDUFA6P56556 154 aa9.16□□□□□ -0.94
TRIM40-208ENST00000489892 RPL19P84098 196 aaKnown RBP9.16□□□□□ -0.94
TRIM40-208ENST00000489892 ASPHD1Q5U4P2 390 aa9.16□□□□□ -0.94
TRIM40-208ENST00000489892 IL17RELQ6ZVW7 336 aa9.16□□□□□ -0.94
TRIM40-208ENST00000489892 THAP8Q8NA92 274 aa9.16□□□□□ -0.94
TRIM40-208ENST00000489892 OR5T1Q8NG75 326 aa9.16□□□□□ -0.94
TRIM40-208ENST00000489892 TMEM158Q8WZ71 300 aa9.16□□□□□ -0.94
TRIM40-208ENST00000489892 C11orf52Q96A22 123 aa9.16□□□□□ -0.94
TRIM40-208ENST00000489892 USMG5Q96IX5 58 aa9.16□□□□□ -0.94
TRIM40-208ENST00000489892 TRGV9Q99603 122 aa9.16□□□□□ -0.94
TRIM40-208ENST00000489892 MGST2Q99735 147 aa9.16□□□□□ -0.94
TRIM40-208ENST00000489892 TMEM167BQ9NRX6 74 aa9.16□□□□□ -0.94
TRIM40-208ENST00000489892 ZNF355PQ9NSJ1 428 aa9.16□□□□□ -0.94
TRIM40-208ENST00000489892 URGCP-MRPS24S4R325 110 aa9.16□□□□□ -0.94
TRIM40-208ENST00000489892 A0A0G2JLM5 398 aa9.15□□□□□ -0.94
TRIM40-208ENST00000489892 DNAJC9-AS1A6NH13 148 aa9.15□□□□□ -0.94
TRIM40-208ENST00000489892 I3L2K1 104 aa9.15□□□□□ -0.94
TRIM40-208ENST00000489892 YIF1AO95070 293 aa9.15□□□□□ -0.94
TRIM40-208ENST00000489892 TRGC2P03986 189 aa9.15□□□□□ -0.94
TRIM40-208ENST00000489892 TRGC1P0CF51 173 aa9.15□□□□□ -0.94
TRIM40-208ENST00000489892 FCGR2BP31994 310 aaPredicted RBP9.15□□□□□ -0.94
TRIM40-208ENST00000489892 TAS2R45P59539 299 aa9.15□□□□□ -0.94
TRIM40-208ENST00000489892 C19orf54Q5BKX5 351 aa9.15□□□□□ -0.94
TRIM40-208ENST00000489892 COA6Q5JTJ3 125 aaKnown RBP9.15□□□□□ -0.94
TRIM40-208ENST00000489892 Q8N2B8 174 aa9.15□□□□□ -0.94
TRIM40-208ENST00000489892 OR51G1Q8NGK1 321 aa9.15□□□□□ -0.94
TRIM40-208ENST00000489892 NPIPB3Q92617 1050 aa9.15□□□□□ -0.94
TRIM40-208ENST00000489892 MRPL32Q9BYC8 188 aaKnown RBP9.15□□□□□ -0.94
TRIM40-208ENST00000489892 FNDC4Q9H6D8 234 aaPredicted RBP9.15□□□□□ -0.94
TRIM40-208ENST00000489892 NIT2Q9NQR4 276 aa9.15□□□□□ -0.94
TRIM40-208ENST00000489892 SLC45A2Q9UMX9 530 aa9.15□□□□□ -0.94
TRIM40-208ENST00000489892 TRBV7-1A0A0A6YYK4 115 aa9.14□□□□□ -0.95
TRIM40-208ENST00000489892 TRBV9A0A0B4J1U6 114 aa9.14□□□□□ -0.95
TRIM40-208ENST00000489892 TCRBV4S1A1TA0A5B7 111 aa9.14□□□□□ -0.95
TRIM40-208ENST00000489892 C9JCJ5 164 aa9.14□□□□□ -0.95
TRIM40-208ENST00000489892 K7EIM0 57 aa9.14□□□□□ -0.95
TRIM40-208ENST00000489892 RNASE1P07998 156 aaKnown RBP9.14□□□□□ -0.95
TRIM40-208ENST00000489892 MFAP2P55001 183 aa9.14□□□□□ -0.95
TRIM40-208ENST00000489892 HILS1P60008 231 aa9.14□□□□□ -0.95
TRIM40-208ENST00000489892 BLCAPP62952 87 aa9.14□□□□□ -0.95
TRIM40-208ENST00000489892 RHOGP84095 191 aa9.14□□□□□ -0.95
TRIM40-208ENST00000489892 PQLC2Q6ZP29 291 aa9.14□□□□□ -0.95
TRIM40-208ENST00000489892 HIST3H2BBQ8N257 126 aa9.14□□□□□ -0.95
TRIM40-208ENST00000489892 OR2T6Q8NHC8 308 aa9.14□□□□□ -0.95
TRIM40-208ENST00000489892 EEF1AKMT3Q96AZ1 226 aa9.14□□□□□ -0.95
TRIM40-208ENST00000489892 FANCD2OSQ96PS1 177 aa9.14□□□□□ -0.95
TRIM40-208ENST00000489892 PFDN5Q99471 154 aa9.14□□□□□ -0.95
TRIM40-208ENST00000489892 TNFRSF19Q9NS68 423 aa9.14□□□□□ -0.95
TRIM40-208ENST00000489892 C21orf62Q9NYP8 219 aa9.14□□□□□ -0.95
TRIM40-208ENST00000489892 FBXL7Q9UJT9 491 aa9.14□□□□□ -0.95
TRIM40-208ENST00000489892 RNF24Q9Y225 148 aa9.14□□□□□ -0.95
TRIM40-208ENST00000489892 DMRT1Q9Y5R6 373 aa9.14□□□□□ -0.95
TRIM40-208ENST00000489892 ANK3Q12955 4377 aaKnown RBP9.13□□□□□ -0.95
TRIM40-208ENST00000489892 SH2D7A6NKC9 451 aaPredicted RBP9.13□□□□□ -0.95
TRIM40-208ENST00000489892 G3V318 75 aa9.13□□□□□ -0.95
TRIM40-208ENST00000489892 GNG7O60262 68 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms