RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 PDCD10Q9BUL8 212 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 SMIM3Q9BZL3 60 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 C20orf27Q9GZN8 174 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 TMEM126AQ9H061 195 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 SH3BGRL3Q9H299 93 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 OR51I2Q9H344 312 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 CACYBPQ9HB71 228 aaKnown RBP0.59□□□□□ -2.31
CCDC39-206ENST00000489868 POPDC3Q9HBV1 291 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 HES4Q9HCC6 221 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 NIT2Q9NQR4 276 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 PRTFDC1Q9NRG1 225 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 ACER3Q9NUN7 267 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 UQCC1Q9NVA1 299 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 FAIMQ9NVQ4 179 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 CALML5Q9NZT1 146 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 MED11Q9P086 117 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 MRPL27Q9P0M9 148 aaKnown RBP0.59□□□□□ -2.31
CCDC39-206ENST00000489868 PRNDQ9UKY0 176 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 PXMP4Q9Y6I8 212 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 U3KQ87 197 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 SCRIBQ14160 1630 aa0.59□□□□□ -2.32
CCDC39-206ENST00000489868 ZNF518AQ6AHZ1 1483 aa0.59□□□□□ -2.32
CCDC39-206ENST00000489868 MRC2Q9UBG0 1479 aa0.59□□□□□ -2.32
CCDC39-206ENST00000489868 KIF15Q9NS87 1388 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 IBTKQ9P2D0 1353 aaPredicted RBP0.58□□□□□ -2.32
CCDC39-206ENST00000489868 OVOS2A0A0J9YW53 1432 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 OVOS2Q6IE36 1432 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 FGD6Q6ZV73 1430 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 MIA2Q96PC5 1412 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 ERBINQ96RT1 1412 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 CAMSAP1Q5T5Y3 1602 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 TRAV36DV7A0A075B6V5 113 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 hCG_1818297A0A087WSY0 165 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 A0A087WX48 190 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 TRAV26-2A0A0B4J265 109 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 A0A1B0GX51 115 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 DUXBA0A1W2PPF3 345 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 hADV38S2A0JD32 116 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 A8MT66 165 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 C9JAW5 83 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 CLDN25C9JDP6 229 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 INMT-MINDY4F8WBC2 141 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 M0R2Z0 102 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 PIRO00625 290 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 GEMIN2O14893 280 aaKnown RBP0.58□□□□□ -2.32
CCDC39-206ENST00000489868 LEPROTO15243 131 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 GGCTO75223 188 aaKnown RBP0.58□□□□□ -2.32
CCDC39-206ENST00000489868 PIAS1O75925 651 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 ZNF682O95780 498 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 FAM107AO95990 144 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 HLA-DRB1P01911 266 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 CSN2P05814 226 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 C8GP07360 202 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 SMIM17P0DL12 118 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 RPL7P18124 248 aaKnown RBP0.58□□□□□ -2.32
CCDC39-206ENST00000489868 CCL1P22362 96 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 RPS3P23396 243 aaKnown RBP eCLIP0.58□□□□□ -2.32
CCDC39-206ENST00000489868 CMPK1P30085 196 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 S100A11P31949 105 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 ATP5G3P48201 142 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 EIF2B2P49770 351 aaKnown RBP0.58□□□□□ -2.32
CCDC39-206ENST00000489868 DEFA3P59666 94 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 MAXP61244 160 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 PKIAP61925 76 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 NCS1P62166 190 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 SNRPD2P62316 118 aaKnown RBP0.58□□□□□ -2.32
CCDC39-206ENST00000489868 RPS28P62857 69 aaKnown RBP0.58□□□□□ -2.32
CCDC39-206ENST00000489868 PPP3R1P63098 170 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 SELENOWP63302 87 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 TNFAIP6P98066 277 aaPredicted RBP0.58□□□□□ -2.32
CCDC39-206ENST00000489868 HIST1H1AQ02539 215 aaPredicted RBP0.58□□□□□ -2.32
CCDC39-206ENST00000489868 FABP9Q0Z7S8 132 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 MORN2Q502X0 79 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 OCIAD2Q56VL3 154 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 IBA57Q5T440 356 aaKnown RBP0.58□□□□□ -2.32
CCDC39-206ENST00000489868 LYRM7Q5U5X0 104 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 HAGHLQ6PII5 290 aaPredicted RBP0.58□□□□□ -2.32
CCDC39-206ENST00000489868 CROCCP2Q86T23 111 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 IFT20Q8IY31 132 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 TCTE3Q8IZS6 198 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 C8orf59Q8N0T1 100 aaPredicted RBP0.58□□□□□ -2.32
CCDC39-206ENST00000489868 OR8I2Q8N0Y5 310 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 DEFB125Q8N687 156 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 ANKRD29Q8N6D5 301 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 GDPD1Q8N9F7 314 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 TMEM229BQ8NBD8 167 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 SLC30A7Q8NEW0 376 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 OR4E2Q8NGC2 313 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 OR13C4Q8NGS5 318 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 TERB2Q8NHR7 220 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 CT55Q8WUE5 264 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 ISOC1Q96CN7 298 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 PLEKHB2Q96CS7 222 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 ADAT3Q96EY9 351 aaPredicted RBP0.58□□□□□ -2.32
CCDC39-206ENST00000489868 PPP3R2Q96LZ3 170 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 TSPAN32Q96QS1 320 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 TP53RKQ96S44 253 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 LYSMD1Q96S90 227 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 TMEM70Q9BUB7 260 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 TMEM147Q9BVK8 224 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms