RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 CFDP00746 253 aaPredicted RBP5.16□□□□□ -1.58
COL9A1-209ENST00000489861 PRB4P10163 310 aaPredicted RBP5.16□□□□□ -1.58
COL9A1-209ENST00000489861 SLC25A6P12236 298 aa5.16□□□□□ -1.58
COL9A1-209ENST00000489861 CRYBB3P26998 211 aa5.16□□□□□ -1.58
COL9A1-209ENST00000489861 OR10J1P30954 320 aa5.16□□□□□ -1.58
COL9A1-209ENST00000489861 ID1P41134 155 aa5.16□□□□□ -1.58
COL9A1-209ENST00000489861 RAB11AP62491 216 aa5.16□□□□□ -1.58
COL9A1-209ENST00000489861 HAMPP81172 84 aa5.16□□□□□ -1.58
COL9A1-209ENST00000489861 SMCO1Q147U7 214 aa5.16□□□□□ -1.58
COL9A1-209ENST00000489861 CNPY1Q3B7I2 92 aa5.16□□□□□ -1.58
COL9A1-209ENST00000489861 BSXQ3C1V8 233 aa5.16□□□□□ -1.58
COL9A1-209ENST00000489861 PYDC2Q56P42 97 aa5.16□□□□□ -1.58
COL9A1-209ENST00000489861 TMEM128Q5BJH2 165 aa5.16□□□□□ -1.58
COL9A1-209ENST00000489861 SPINK9Q5DT21 86 aa5.16□□□□□ -1.58
COL9A1-209ENST00000489861 SPANXN2Q5MJ10 180 aa5.16□□□□□ -1.58
COL9A1-209ENST00000489861 SPATA31B1PQ5VZV4 182 aa5.16□□□□□ -1.58
COL9A1-209ENST00000489861 S100A7AQ86SG5 101 aa5.16□□□□□ -1.58
COL9A1-209ENST00000489861 SELENOHQ8IZQ5 122 aaKnown RBP5.16□□□□□ -1.58
COL9A1-209ENST00000489861 ST8SIA2Q92186 375 aa5.16□□□□□ -1.58
COL9A1-209ENST00000489861 ZNF414Q96IQ9 312 aa5.16□□□□□ -1.58
COL9A1-209ENST00000489861 FAM210BQ96KR6 192 aa5.16□□□□□ -1.58
COL9A1-209ENST00000489861 CIB3Q96Q77 187 aaPredicted RBP5.16□□□□□ -1.58
COL9A1-209ENST00000489861 TBC1D24Q9ULP9 559 aa5.16□□□□□ -1.58
COL9A1-209ENST00000489861 RNF24Q9Y225 148 aa5.16□□□□□ -1.58
COL9A1-209ENST00000489861 TNXBP22105 4242 aa5.15□□□□□ -1.58
COL9A1-209ENST00000489861 IGHV3-49A0A0A0MS15 119 aa5.15□□□□□ -1.59
COL9A1-209ENST00000489861 NAP1L6A6NFF2 107 aa5.15□□□□□ -1.59
COL9A1-209ENST00000489861 CENPXA8MT69 81 aa5.15□□□□□ -1.59
COL9A1-209ENST00000489861 ZNF705EA8MWA4 302 aaPredicted RBP5.15□□□□□ -1.59
COL9A1-209ENST00000489861 FAM90A26D6RGX4 464 aa5.15□□□□□ -1.59
COL9A1-209ENST00000489861 H3BMQ9 156 aa5.15□□□□□ -1.59
COL9A1-209ENST00000489861 ZNF701M0R085 212 aaPredicted RBP5.15□□□□□ -1.59
COL9A1-209ENST00000489861 EREGO14944 169 aa5.15□□□□□ -1.59
COL9A1-209ENST00000489861 RD3LP0DJH9 198 aa5.15□□□□□ -1.59
COL9A1-209ENST00000489861 TNFSF8P32971 234 aa5.15□□□□□ -1.59
COL9A1-209ENST00000489861 GPX4P36969 197 aaPredicted RBP5.15□□□□□ -1.59
COL9A1-209ENST00000489861 KRTAP10-1P60331 282 aa5.15□□□□□ -1.59
COL9A1-209ENST00000489861 UBE2MP61081 183 aaKnown RBP5.15□□□□□ -1.59
COL9A1-209ENST00000489861 DHRS2Q13268 280 aa5.15□□□□□ -1.59
COL9A1-209ENST00000489861 IZUMO4Q1ZYL8 232 aa5.15□□□□□ -1.59
COL9A1-209ENST00000489861 NMSQ5H8A3 153 aa5.15□□□□□ -1.59
COL9A1-209ENST00000489861 OR8G2PQ6IF36 304 aa5.15□□□□□ -1.59
COL9A1-209ENST00000489861 TRPT1Q86TN4 253 aaKnown RBP5.15□□□□□ -1.59
COL9A1-209ENST00000489861 OR1S1Q8NH92 325 aa5.15□□□□□ -1.59
COL9A1-209ENST00000489861 DTD1Q8TEA8 209 aa5.15□□□□□ -1.59
COL9A1-209ENST00000489861 GPR146Q96CH1 333 aa5.15□□□□□ -1.59
COL9A1-209ENST00000489861 SLC35E1Q96K37 410 aa5.15□□□□□ -1.59
COL9A1-209ENST00000489861 SLIRPQ9GZT3 109 aaKnown RBP5.15□□□□□ -1.59
COL9A1-209ENST00000489861 NRN1Q9NPD7 142 aa5.15□□□□□ -1.59
COL9A1-209ENST00000489861 HSPB7Q9UBY9 170 aa5.15□□□□□ -1.59
COL9A1-209ENST00000489861 X6R8D5 127 aa5.15□□□□□ -1.59
COL9A1-209ENST00000489861 IGHV3OR16-13A0A075B7E8 117 aa5.14□□□□□ -1.59
COL9A1-209ENST00000489861 IGHV3-74A0A0B4J1X5 117 aa5.14□□□□□ -1.59
COL9A1-209ENST00000489861 TOMM40O96008 361 aa5.14□□□□□ -1.59
COL9A1-209ENST00000489861 IGHV3-48P01763 117 aa5.14□□□□□ -1.59
COL9A1-209ENST00000489861 GIG44P09565 113 aaPredicted RBP5.14□□□□□ -1.59
COL9A1-209ENST00000489861 ZNF688P0C7X2 276 aa5.14□□□□□ -1.59
COL9A1-209ENST00000489861 MEOX2P50222 304 aa5.14□□□□□ -1.59
COL9A1-209ENST00000489861 RND2P52198 227 aa5.14□□□□□ -1.59
COL9A1-209ENST00000489861 KLF9Q13886 244 aaPredicted RBP5.14□□□□□ -1.59
COL9A1-209ENST00000489861 ACTL10Q5JWF8 245 aa5.14□□□□□ -1.59
COL9A1-209ENST00000489861 LEMD1Q68G75 181 aa5.14□□□□□ -1.59
COL9A1-209ENST00000489861 FAAP20Q6NZ36 180 aa5.14□□□□□ -1.59
COL9A1-209ENST00000489861 SIGLEC15Q6ZMC9 328 aa5.14□□□□□ -1.59
COL9A1-209ENST00000489861 LINC00528Q8N1L1 170 aa5.14□□□□□ -1.59
COL9A1-209ENST00000489861 OR51G1Q8NGK1 321 aa5.14□□□□□ -1.59
COL9A1-209ENST00000489861 COQ8AQ8NI60 647 aa5.14□□□□□ -1.59
COL9A1-209ENST00000489861 TMED3Q9Y3Q3 217 aa5.14□□□□□ -1.59
COL9A1-209ENST00000489861 A0A0G2JRQ6 117 aa5.13□□□□□ -1.59
COL9A1-209ENST00000489861 ZFP92A6NM28 416 aa5.13□□□□□ -1.59
COL9A1-209ENST00000489861 IL4P05112 153 aa5.13□□□□□ -1.59
COL9A1-209ENST00000489861 IGLC1P0CG04 106 aa5.13□□□□□ -1.59
COL9A1-209ENST00000489861 BTF3P20290 206 aaKnown RBP5.13□□□□□ -1.59
COL9A1-209ENST00000489861 NKX2-1P43699 371 aaPredicted RBP5.13□□□□□ -1.59
COL9A1-209ENST00000489861 B2MP61769 119 aa5.13□□□□□ -1.59
COL9A1-209ENST00000489861 TIGITQ495A1 244 aa5.13□□□□□ -1.59
COL9A1-209ENST00000489861 PSMG4Q5JS54 123 aa5.13□□□□□ -1.59
COL9A1-209ENST00000489861 C1orf194Q5T5A4 169 aa5.13□□□□□ -1.59
COL9A1-209ENST00000489861 GGNBP1Q5YKI7 109 aa5.13□□□□□ -1.59
COL9A1-209ENST00000489861 TRIQKQ629K1 86 aa5.13□□□□□ -1.59
COL9A1-209ENST00000489861 PRSS54Q6PEW0 395 aa5.13□□□□□ -1.59
COL9A1-209ENST00000489861 C16orf54Q6UWD8 224 aa5.13□□□□□ -1.59
COL9A1-209ENST00000489861 TMED4Q7Z7H5 227 aa5.13□□□□□ -1.59
COL9A1-209ENST00000489861 LRTM2Q8N967 370 aa5.13□□□□□ -1.59
COL9A1-209ENST00000489861 ZNRF2Q8NHG8 242 aa5.13□□□□□ -1.59
COL9A1-209ENST00000489861 LHFPL5Q8TAF8 219 aa5.13□□□□□ -1.59
COL9A1-209ENST00000489861 DCANP1Q8TF63 244 aa5.13□□□□□ -1.59
COL9A1-209ENST00000489861 ACY3Q96HD9 319 aa5.13□□□□□ -1.59
COL9A1-209ENST00000489861 NEU1Q99519 415 aa5.13□□□□□ -1.59
COL9A1-209ENST00000489861 SOSTQ9BQB4 213 aa5.13□□□□□ -1.59
COL9A1-209ENST00000489861 FNDC4Q9H6D8 234 aaPredicted RBP5.13□□□□□ -1.59
COL9A1-209ENST00000489861 GOLT1BQ9Y3E0 138 aa5.13□□□□□ -1.59
COL9A1-209ENST00000489861 IGHV3-66A0A0C4DH42 116 aa5.12□□□□□ -1.59
COL9A1-209ENST00000489861 SNRPGP15A8MWD9 76 aa5.12□□□□□ -1.59
COL9A1-209ENST00000489861 WRBO00258 174 aa5.12□□□□□ -1.59
COL9A1-209ENST00000489861 IGKV1-17P01599 117 aa5.12□□□□□ -1.59
COL9A1-209ENST00000489861 SPART-AS1P0CW21 52 aa5.12□□□□□ -1.59
COL9A1-209ENST00000489861 HLA-DRB4P13762 266 aa5.12□□□□□ -1.59
COL9A1-209ENST00000489861 ASIPP42127 132 aa5.12□□□□□ -1.59
COL9A1-209ENST00000489861 PSMB3P49720 205 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms