RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, human

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRD9-208	ENST00000489816	ATP5I	P56385	69 aa	Predicted RBP	12.51	□□□□□ -0.41
BRD9-208	ENST00000489816	CIART	Q8N365	385 aa	Predicted RBP	12.51	□□□□□ -0.41
BRD9-208	ENST00000489816	SMIM27	A0A1W2PRY6	76 aa		12.5	□□□□□ -0.41
BRD9-208	ENST00000489816		A0A1W2PS18	150 aa		12.5	□□□□□ -0.41
BRD9-208	ENST00000489816	AMY1A	P04745	511 aa		12.5	□□□□□ -0.41
BRD9-208	ENST00000489816	G0S2	P27469	103 aa		12.5	□□□□□ -0.41
BRD9-208	ENST00000489816	TPTE2P1	Q5T6R2	138 aa		12.5	□□□□□ -0.41
BRD9-208	ENST00000489816	OR4A5	Q8NH83	315 aa		12.5	□□□□□ -0.41
BRD9-208	ENST00000489816	PGLYRP4	Q96LB8	373 aa		12.5	□□□□□ -0.41
BRD9-208	ENST00000489816	NOL4L	Q96MY1	436 aa	Predicted RBP	12.5	□□□□□ -0.41
BRD9-208	ENST00000489816		Q9H3A6	140 aa		12.5	□□□□□ -0.41
BRD9-208	ENST00000489816	NRN1	Q9NPD7	142 aa		12.5	□□□□□ -0.41
BRD9-208	ENST00000489816	TEX22	C9J3V5	150 aa		12.5	□□□□□ -0.41
BRD9-208	ENST00000489816	BRS3	P32247	399 aa		12.5	□□□□□ -0.41
BRD9-208	ENST00000489816	THAP8	Q8NA92	274 aa		12.5	□□□□□ -0.41
BRD9-208	ENST00000489816	SH2D7	A6NKC9	451 aa	Predicted RBP	12.49	□□□□□ -0.41
BRD9-208	ENST00000489816	GPX1	P07203	203 aa		12.49	□□□□□ -0.41
BRD9-208	ENST00000489816	PRNT	Q86SH4	94 aa		12.49	□□□□□ -0.41
BRD9-208	ENST00000489816	TEX45	Q8NA69	505 aa		12.49	□□□□□ -0.41
BRD9-208	ENST00000489816	GOLT1A	Q6ZVE7	132 aa		12.49	□□□□□ -0.41
BRD9-208	ENST00000489816	NCBP2L	A6PVI3	153 aa	Known RBP	12.49	□□□□□ -0.41
BRD9-208	ENST00000489816	CASP6	P55212	293 aa		12.49	□□□□□ -0.41
BRD9-208	ENST00000489816	MAJIN	Q3KP22	176 aa		12.49	□□□□□ -0.41
BRD9-208	ENST00000489816	TPPP3	Q9BW30	176 aa		12.49	□□□□□ -0.41
BRD9-208	ENST00000489816	IZUMO1R	A6ND01	250 aa		12.48	□□□□□ -0.41
BRD9-208	ENST00000489816	DIRC3	C9JPN6	131 aa		12.48	□□□□□ -0.41
BRD9-208	ENST00000489816	RPL19	P84098	196 aa	Known RBP	12.48	□□□□□ -0.41
BRD9-208	ENST00000489816	C1orf194	Q5T5A4	169 aa		12.48	□□□□□ -0.41
BRD9-208	ENST00000489816	RNF2	Q99496	336 aa		12.48	□□□□□ -0.41
BRD9-208	ENST00000489816	RASL11B	Q9BPW5	248 aa		12.48	□□□□□ -0.41
BRD9-208	ENST00000489816	F11R	Q9Y624	299 aa	Known RBP	12.48	□□□□□ -0.41
BRD9-208	ENST00000489816	ITPR1	Q14643	2758 aa		12.48	□□□□□ -0.41
BRD9-208	ENST00000489816	TAS2R60	P59551	318 aa		12.48	□□□□□ -0.41
BRD9-208	ENST00000489816	DNLZ	Q5SXM8	178 aa		12.48	□□□□□ -0.41
BRD9-208	ENST00000489816	RNASEK	Q6P5S7	137 aa	Known RBP	12.48	□□□□□ -0.41
BRD9-208	ENST00000489816	ZNF596	Q8TC21	504 aa		12.48	□□□□□ -0.41
BRD9-208	ENST00000489816	PAFAH1B2	P68402	229 aa		12.47	□□□□□ -0.41
BRD9-208	ENST00000489816	ETFRF1	Q6IPR1	90 aa		12.47	□□□□□ -0.41
BRD9-208	ENST00000489816	OR8B3	Q8NGG8	313 aa		12.47	□□□□□ -0.41
BRD9-208	ENST00000489816	OR8B2	Q96RD0	313 aa		12.47	□□□□□ -0.41
BRD9-208	ENST00000489816	VAMP8	Q9BV40	100 aa		12.47	□□□□□ -0.41
BRD9-208	ENST00000489816		M0R3E3	92 aa		12.47	□□□□□ -0.41
BRD9-208	ENST00000489816	WDR73	Q6P4I2	378 aa		12.47	□□□□□ -0.41
BRD9-208	ENST00000489816	TMEM116	Q8NCL8	245 aa		12.47	□□□□□ -0.41
BRD9-208	ENST00000489816	ZNF586	Q9NXT0	402 aa		12.47	□□□□□ -0.41
BRD9-208	ENST00000489816	HIGD1A	Q9Y241	93 aa		12.47	□□□□□ -0.41
BRD9-208	ENST00000489816	ARL2-SNX15	V9GYD0	113 aa		12.47	□□□□□ -0.41
BRD9-208	ENST00000489816	CRYGC	P07315	174 aa		12.46	□□□□□ -0.41
BRD9-208	ENST00000489816	IGLC1	P0CG04	106 aa		12.46	□□□□□ -0.41
BRD9-208	ENST00000489816	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	12.46	□□□□□ -0.41
BRD9-208	ENST00000489816	CSPG4	Q6UVK1	2322 aa		12.46	□□□□□ -0.41
BRD9-208	ENST00000489816	MUC21	A0A0G2JKD1	596 aa		12.46	□□□□□ -0.41
BRD9-208	ENST00000489816	MUC21	A0A140T8X8	626 aa		12.46	□□□□□ -0.41
BRD9-208	ENST00000489816	CRYGB	P07316	175 aa		12.46	□□□□□ -0.41
BRD9-208	ENST00000489816	ZNF138	P52744	262 aa		12.46	□□□□□ -0.41
BRD9-208	ENST00000489816	MUC21	Q5SSG8	566 aa		12.46	□□□□□ -0.41
BRD9-208	ENST00000489816	CACNA1A	O00555	2505 aa		12.46	□□□□□ -0.41
BRD9-208	ENST00000489816	CELSR2	Q9HCU4	2923 aa		12.46	□□□□□ -0.41
BRD9-208	ENST00000489816	TRAV9-1	A0A075B6T8	112 aa		12.46	□□□□□ -0.42
BRD9-208	ENST00000489816	IGKV1-17	P01599	117 aa		12.46	□□□□□ -0.42
BRD9-208	ENST00000489816	HLA-DQA1	P01909	254 aa		12.46	□□□□□ -0.42
BRD9-208	ENST00000489816	GP9	P14770	177 aa		12.46	□□□□□ -0.42
BRD9-208	ENST00000489816	PAX1	P15863	534 aa		12.46	□□□□□ -0.42
BRD9-208	ENST00000489816	HTR1D	P28221	377 aa		12.46	□□□□□ -0.42
BRD9-208	ENST00000489816		Q0VG73	95 aa		12.46	□□□□□ -0.42
BRD9-208	ENST00000489816	C18orf32	Q8TCD1	76 aa		12.46	□□□□□ -0.42
BRD9-208	ENST00000489816	TSKU	Q8WUA8	353 aa		12.46	□□□□□ -0.42
BRD9-208	ENST00000489816	GPR82	Q96P67	336 aa		12.46	□□□□□ -0.42
BRD9-208	ENST00000489816	CHODL	Q9H9P2	273 aa		12.46	□□□□□ -0.42
BRD9-208	ENST00000489816	INS-IGF2	F8WCM5	200 aa		12.45	□□□□□ -0.42
BRD9-208	ENST00000489816	TCRA	P04437	139 aa		12.45	□□□□□ -0.42
BRD9-208	ENST00000489816	IL4	P05112	153 aa		12.45	□□□□□ -0.42
BRD9-208	ENST00000489816	FCGR2B	P31994	310 aa	Predicted RBP	12.45	□□□□□ -0.42
BRD9-208	ENST00000489816	C8orf46	Q8TAG6	207 aa		12.45	□□□□□ -0.42
BRD9-208	ENST00000489816	GTSF1	Q8WW33	167 aa		12.45	□□□□□ -0.42
BRD9-208	ENST00000489816	TRGV9	Q99603	122 aa		12.45	□□□□□ -0.42
BRD9-208	ENST00000489816	TMEM183B	Q1AE95	376 aa		12.45	□□□□□ -0.42
BRD9-208	ENST00000489816	IGFL4	Q6B9Z1	124 aa		12.45	□□□□□ -0.42
BRD9-208	ENST00000489816	FAM71F2	Q6NXP2	309 aa		12.45	□□□□□ -0.42
BRD9-208	ENST00000489816	DAZAP1	Q96EP5	407 aa	Known RBP	12.45	□□□□□ -0.42
BRD9-208	ENST00000489816	RBM14	Q96PK6	669 aa	Known RBP	12.45	□□□□□ -0.42
BRD9-208	ENST00000489816	MCRIP2	Q9BUT9	160 aa	Known RBP	12.45	□□□□□ -0.42
BRD9-208	ENST00000489816	CSMD2	Q7Z408	3487 aa		12.45	□□□□□ -0.42
BRD9-208	ENST00000489816	UTP20	O75691	2785 aa	Known RBP	12.45	□□□□□ -0.42
BRD9-208	ENST00000489816	HSBP1	O75506	76 aa		12.44	□□□□□ -0.42
BRD9-208	ENST00000489816	MT-ND6	P03923	174 aa		12.44	□□□□□ -0.42
BRD9-208	ENST00000489816	LIPF	P07098	398 aa		12.44	□□□□□ -0.42
BRD9-208	ENST00000489816	C3orf79	P0CE67	100 aa		12.44	□□□□□ -0.42
BRD9-208	ENST00000489816	MYCNOS	P40205	109 aa		12.44	□□□□□ -0.42
BRD9-208	ENST00000489816	C8orf31	Q8N9H6	132 aa		12.44	□□□□□ -0.42
BRD9-208	ENST00000489816		H0Y8G0	127 aa		12.44	□□□□□ -0.42
BRD9-208	ENST00000489816	ZNF324	O75467	553 aa	Predicted RBP	12.44	□□□□□ -0.42
BRD9-208	ENST00000489816		P01737	135 aa		12.44	□□□□□ -0.42
BRD9-208	ENST00000489816	ADORA2A-AS1	P86434	159 aa		12.44	□□□□□ -0.42
BRD9-208	ENST00000489816	LY6D	Q14210	128 aa		12.44	□□□□□ -0.42
BRD9-208	ENST00000489816	DYNAP	Q8N1N2	210 aa		12.44	□□□□□ -0.42
BRD9-208	ENST00000489816	KCNS1	Q96KK3	526 aa		12.44	□□□□□ -0.42
BRD9-208	ENST00000489816	LPAR2	Q9HBW0	351 aa		12.44	□□□□□ -0.42
BRD9-208	ENST00000489816	TMSB15B	A0A087X1C1	80 aa		12.44	□□□□□ -0.42
BRD9-208	ENST00000489816	HIST1H1E	P10412	219 aa	Known RBP	12.44	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms