RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 IGHV3OR16-13A0A075B7E8 117 aa12.16□□□□□ -0.46
CLIC4-203ENST00000489758 BORCS7-ASMTA0A0B4J1R7 106 aa12.16□□□□□ -0.46
CLIC4-203ENST00000489758 IGHV3-74A0A0B4J1X5 117 aa12.16□□□□□ -0.46
CLIC4-203ENST00000489758 BCL2L11O43521 198 aa12.16□□□□□ -0.46
CLIC4-203ENST00000489758 HYPMO75409 117 aa12.16□□□□□ -0.46
CLIC4-203ENST00000489758 B2MP61769 119 aa12.16□□□□□ -0.46
CLIC4-203ENST00000489758 DEFB114Q30KQ6 69 aa12.16□□□□□ -0.46
CLIC4-203ENST00000489758 SAMD5Q5TGI4 173 aa12.16□□□□□ -0.46
CLIC4-203ENST00000489758 PXDC1Q5TGL8 231 aa12.16□□□□□ -0.46
CLIC4-203ENST00000489758 LAMTOR1Q6IAA8 161 aa12.16□□□□□ -0.46
CLIC4-203ENST00000489758 C9orf62Q8N4C0 152 aa12.16□□□□□ -0.46
CLIC4-203ENST00000489758 ST8SIA2Q92186 375 aa12.16□□□□□ -0.46
CLIC4-203ENST00000489758 ARL6Q9H0F7 186 aa12.16□□□□□ -0.46
CLIC4-203ENST00000489758 ARV1Q9H2C2 271 aa12.16□□□□□ -0.46
CLIC4-203ENST00000489758 PKD1L1Q8TDX9 2849 aa12.16□□□□□ -0.46
CLIC4-203ENST00000489758 IGHV3-66A0A0C4DH42 116 aa12.15□□□□□ -0.46
CLIC4-203ENST00000489758 C17orf112F2Z3M2 114 aa12.15□□□□□ -0.46
CLIC4-203ENST00000489758 G3V4G9 280 aa12.15□□□□□ -0.46
CLIC4-203ENST00000489758 BUB3O43684 328 aa12.15□□□□□ -0.46
CLIC4-203ENST00000489758 PFDN1O60925 122 aa12.15□□□□□ -0.46
CLIC4-203ENST00000489758 JTBO76095 146 aa12.15□□□□□ -0.46
CLIC4-203ENST00000489758 ZNF709Q8N972 641 aa12.15□□□□□ -0.46
CLIC4-203ENST00000489758 HSD17B11Q8NBQ5 300 aa12.15□□□□□ -0.46
CLIC4-203ENST00000489758 TMEM37Q8WXS4 190 aa12.15□□□□□ -0.46
CLIC4-203ENST00000489758 RNF2Q99496 336 aa12.15□□□□□ -0.46
CLIC4-203ENST00000489758 KCNIP2Q9NS61 270 aa12.15□□□□□ -0.46
CLIC4-203ENST00000489758 TECRQ9NZ01 308 aaKnown RBP12.15□□□□□ -0.46
CLIC4-203ENST00000489758 TIMM9Q9Y5J7 89 aa12.15□□□□□ -0.46
CLIC4-203ENST00000489758 SELENOKQ9Y6D0 94 aa12.15□□□□□ -0.46
CLIC4-203ENST00000489758 KANTRA0A1W2PQU2 76 aa12.14□□□□□ -0.47
CLIC4-203ENST00000489758 ATP6V0CP27449 155 aa12.14□□□□□ -0.47
CLIC4-203ENST00000489758 NKX2-5P52952 324 aaPredicted RBP12.14□□□□□ -0.47
CLIC4-203ENST00000489758 CD300EQ496F6 205 aaPredicted RBP12.14□□□□□ -0.47
CLIC4-203ENST00000489758 GCSAMLQ5JQS6 135 aa12.14□□□□□ -0.47
CLIC4-203ENST00000489758 FAM90A2PQ658T7 463 aa12.14□□□□□ -0.47
CLIC4-203ENST00000489758 C16orf54Q6UWD8 224 aa12.14□□□□□ -0.47
CLIC4-203ENST00000489758 Q6ZRG5 221 aa12.14□□□□□ -0.47
CLIC4-203ENST00000489758 DYNLRB2Q8TF09 96 aa12.14□□□□□ -0.47
CLIC4-203ENST00000489758 UHRF2Q96PU4 802 aa12.14□□□□□ -0.47
CLIC4-203ENST00000489758 GPR61Q9BZJ8 451 aa12.14□□□□□ -0.47
CLIC4-203ENST00000489758 SH3BGRL3Q9H299 93 aa12.14□□□□□ -0.47
CLIC4-203ENST00000489758 HIGD1AQ9Y241 93 aa12.14□□□□□ -0.47
CLIC4-203ENST00000489758 ELOA3CA0A087WX78 387 aaPredicted RBP12.13□□□□□ -0.47
CLIC4-203ENST00000489758 IZUMO1RA6ND01 250 aa12.13□□□□□ -0.47
CLIC4-203ENST00000489758 H3BRN7 92 aa12.13□□□□□ -0.47
CLIC4-203ENST00000489758 COX7A2P2O60397 106 aa12.13□□□□□ -0.47
CLIC4-203ENST00000489758 OR5G3P0C626 314 aa12.13□□□□□ -0.47
CLIC4-203ENST00000489758 OR2K2Q8NGT1 345 aa12.13□□□□□ -0.47
CLIC4-203ENST00000489758 GLMPQ8WWB7 406 aa12.13□□□□□ -0.47
CLIC4-203ENST00000489758 PSMG3Q9BT73 122 aaPredicted RBP12.13□□□□□ -0.47
CLIC4-203ENST00000489758 SHANK2-AS3Q9BTD1 123 aa12.13□□□□□ -0.47
CLIC4-203ENST00000489758 SCRT1Q9BWW7 348 aa12.13□□□□□ -0.47
CLIC4-203ENST00000489758 SLC25A39Q9BZJ4 359 aaPredicted RBP12.13□□□□□ -0.47
CLIC4-203ENST00000489758 DNAJC4Q9NNZ3 241 aa12.13□□□□□ -0.47
CLIC4-203ENST00000489758 A0A1W2PS18 150 aa12.12□□□□□ -0.47
CLIC4-203ENST00000489758 ZNF98A6NK75 572 aa12.12□□□□□ -0.47
CLIC4-203ENST00000489758 EGFEM1PQ0D2K5 195 aa12.12□□□□□ -0.47
CLIC4-203ENST00000489758 FFAR4Q5NUL3 377 aa12.12□□□□□ -0.47
CLIC4-203ENST00000489758 C1orf194Q5T5A4 169 aa12.12□□□□□ -0.47
CLIC4-203ENST00000489758 MORN5Q5VZ52 161 aa12.12□□□□□ -0.47
CLIC4-203ENST00000489758 TMEM61Q8N0U2 210 aa12.12□□□□□ -0.47
CLIC4-203ENST00000489758 OR1L4Q8NGR5 311 aa12.12□□□□□ -0.47
CLIC4-203ENST00000489758 OR2G3Q8NGZ4 309 aa12.12□□□□□ -0.47
CLIC4-203ENST00000489758 GNPNAT1Q96EK6 184 aaPredicted RBP12.12□□□□□ -0.47
CLIC4-203ENST00000489758 NARS2Q96I59 477 aaKnown RBP12.12□□□□□ -0.47
CLIC4-203ENST00000489758 TMEM231Q9H6L2 316 aa12.12□□□□□ -0.47
CLIC4-203ENST00000489758 BMI1P35226 326 aa12.11□□□□□ -0.47
CLIC4-203ENST00000489758 C10orf113Q5VZT2 155 aa12.11□□□□□ -0.47
CLIC4-203ENST00000489758 LEMD1Q68G75 181 aa12.11□□□□□ -0.47
CLIC4-203ENST00000489758 LINC00305Q7Z4B0 112 aa12.11□□□□□ -0.47
CLIC4-203ENST00000489758 GATAD1Q8WUU5 269 aa12.11□□□□□ -0.47
CLIC4-203ENST00000489758 GRAMD2BQ96HH9 432 aa12.11□□□□□ -0.47
CLIC4-203ENST00000489758 PFDN5Q99471 154 aa12.11□□□□□ -0.47
CLIC4-203ENST00000489758 ZNF471Q9BX82 626 aaPredicted RBP12.11□□□□□ -0.47
CLIC4-203ENST00000489758 PFDN2Q9UHV9 154 aa12.11□□□□□ -0.47
CLIC4-203ENST00000489758 ZNF785A8K8V0 405 aa12.1□□□□□ -0.47
CLIC4-203ENST00000489758 BOLA2-SMG1P6H3BVE0 249 aa12.1□□□□□ -0.47
CLIC4-203ENST00000489758 SPP1P10451 314 aa12.1□□□□□ -0.47
CLIC4-203ENST00000489758 KRTAP10-11P60412 298 aa12.1□□□□□ -0.47
CLIC4-203ENST00000489758 BEAN1Q3B7T3 259 aa12.1□□□□□ -0.47
CLIC4-203ENST00000489758 KPRPQ5T749 579 aaPredicted RBP12.1□□□□□ -0.47
CLIC4-203ENST00000489758 TCF24Q7RTU0 167 aa12.1□□□□□ -0.47
CLIC4-203ENST00000489758 STOML3Q8TAV4 291 aa12.1□□□□□ -0.47
CLIC4-203ENST00000489758 PPP1R14BQ96C90 147 aa12.1□□□□□ -0.47
CLIC4-203ENST00000489758 SLC25A32Q9H2D1 315 aa12.1□□□□□ -0.47
CLIC4-203ENST00000489758 SEPSECSQ9HD40 501 aaKnown RBP12.1□□□□□ -0.47
CLIC4-203ENST00000489758 TRAV25A0A0B4J276 109 aa12.09□□□□□ -0.47
CLIC4-203ENST00000489758 TSPAN4O14817 238 aa12.09□□□□□ -0.47
CLIC4-203ENST00000489758 SERF2P84101 59 aa12.09□□□□□ -0.47
CLIC4-203ENST00000489758 SPATA31B1PQ5VZV4 182 aa12.09□□□□□ -0.47
CLIC4-203ENST00000489758 LCN12Q6JVE5 192 aa12.09□□□□□ -0.47
CLIC4-203ENST00000489758 SLC25A22Q9H936 323 aa12.09□□□□□ -0.47
CLIC4-203ENST00000489758 CMYA5Q8N3K9 4069 aa12.09□□□□□ -0.47
CLIC4-203ENST00000489758 TRAV5A0A0B4J249 113 aa12.08□□□□□ -0.48
CLIC4-203ENST00000489758 CD5P06127 495 aa12.08□□□□□ -0.48
CLIC4-203ENST00000489758 M6PRP20645 277 aa12.08□□□□□ -0.48
CLIC4-203ENST00000489758 S100A7P31151 101 aa12.08□□□□□ -0.48
CLIC4-203ENST00000489758 RAB2AP61019 212 aa12.08□□□□□ -0.48
CLIC4-203ENST00000489758 S100A7AQ86SG5 101 aa12.08□□□□□ -0.48
CLIC4-203ENST00000489758 BAP18Q8IXM2 172 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms