RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 LINC00869P0C866 280 aa8.27□□□□□ -1.09
CPSF7-212ENST00000489728 LYL1P12980 280 aa8.27□□□□□ -1.09
CPSF7-212ENST00000489728 CXCL3P19876 107 aa8.27□□□□□ -1.09
CPSF7-212ENST00000489728 EWSR1Q01844 656 aaKnown RBP eCLIP8.27□□□□□ -1.09
CPSF7-212ENST00000489728 OR2F1Q13607 317 aa8.27□□□□□ -1.09
CPSF7-212ENST00000489728 TMEM217Q8N7C4 229 aa8.27□□□□□ -1.09
CPSF7-212ENST00000489728 OR11H7Q8NGC8 314 aa8.27□□□□□ -1.09
CPSF7-212ENST00000489728 RNF126Q9BV68 326 aa8.27□□□□□ -1.09
CPSF7-212ENST00000489728 MS4A6AQ9H2W1 248 aa8.27□□□□□ -1.09
CPSF7-212ENST00000489728 IGHV3-66A0A0C4DH42 116 aa8.26□□□□□ -1.09
CPSF7-212ENST00000489728 K7EQG2 157 aa8.26□□□□□ -1.09
CPSF7-212ENST00000489728 DNASE2O00115 360 aaPredicted RBP8.26□□□□□ -1.09
CPSF7-212ENST00000489728 AGPAT2O15120 278 aa8.26□□□□□ -1.09
CPSF7-212ENST00000489728 RAP2BP61225 183 aa8.26□□□□□ -1.09
CPSF7-212ENST00000489728 RPL11P62913 178 aaKnown RBP8.26□□□□□ -1.09
CPSF7-212ENST00000489728 FCN2Q15485 313 aa8.26□□□□□ -1.09
CPSF7-212ENST00000489728 ODF3L2Q3SX64 289 aa8.26□□□□□ -1.09
CPSF7-212ENST00000489728 SIGLEC15Q6ZMC9 328 aa8.26□□□□□ -1.09
CPSF7-212ENST00000489728 LINC00322Q6ZN03 302 aaPredicted RBP8.26□□□□□ -1.09
CPSF7-212ENST00000489728 THAP6Q8TBB0 222 aa8.26□□□□□ -1.09
CPSF7-212ENST00000489728 SRD5A3Q9H8P0 318 aa8.26□□□□□ -1.09
CPSF7-212ENST00000489728 NRN1Q9NPD7 142 aa8.26□□□□□ -1.09
CPSF7-212ENST00000489728 KCNIP2Q9NS61 270 aa8.26□□□□□ -1.09
CPSF7-212ENST00000489728 ELOA3CA0A087WX78 387 aaPredicted RBP8.25□□□□□ -1.09
CPSF7-212ENST00000489728 HYPMO75409 117 aa8.25□□□□□ -1.09
CPSF7-212ENST00000489728 RPL29P47914 159 aaKnown RBP8.25□□□□□ -1.09
CPSF7-212ENST00000489728 CAMLGP49069 296 aa8.25□□□□□ -1.09
CPSF7-212ENST00000489728 MEOX2P50222 304 aa8.25□□□□□ -1.09
CPSF7-212ENST00000489728 DEFB125Q8N687 156 aa8.25□□□□□ -1.09
CPSF7-212ENST00000489728 STXBP6Q8NFX7 210 aa8.25□□□□□ -1.09
CPSF7-212ENST00000489728 OR5C1Q8NGR4 320 aa8.25□□□□□ -1.09
CPSF7-212ENST00000489728 OR1B1Q8NGR6 318 aa8.25□□□□□ -1.09
CPSF7-212ENST00000489728 DCANP1Q8TF63 244 aa8.25□□□□□ -1.09
CPSF7-212ENST00000489728 PPP1R14BQ96C90 147 aa8.25□□□□□ -1.09
CPSF7-212ENST00000489728 MGST2Q99735 147 aa8.25□□□□□ -1.09
CPSF7-212ENST00000489728 MBD2Q9UBB5 411 aa8.25□□□□□ -1.09
CPSF7-212ENST00000489728 HIGD1AQ9Y241 93 aa8.25□□□□□ -1.09
CPSF7-212ENST00000489728 SELENOKQ9Y6D0 94 aa8.25□□□□□ -1.09
CPSF7-212ENST00000489728 TGP01266 2768 aa8.25□□□□□ -1.09
CPSF7-212ENST00000489728 UBE2L5PA0A1B0GUS4 154 aa8.24□□□□□ -1.09
CPSF7-212ENST00000489728 ZNF98A6NK75 572 aa8.24□□□□□ -1.09
CPSF7-212ENST00000489728 H3BRN7 92 aa8.24□□□□□ -1.09
CPSF7-212ENST00000489728 ORM2P19652 201 aa8.24□□□□□ -1.09
CPSF7-212ENST00000489728 GATA2P23769 480 aaPredicted RBP8.24□□□□□ -1.09
CPSF7-212ENST00000489728 RPL12P30050 165 aaKnown RBP8.24□□□□□ -1.09
CPSF7-212ENST00000489728 GALR1P47211 349 aa8.24□□□□□ -1.09
CPSF7-212ENST00000489728 PRR20EP86478 221 aa8.24□□□□□ -1.09
CPSF7-212ENST00000489728 PRR20CP86479 221 aa8.24□□□□□ -1.09
CPSF7-212ENST00000489728 PRR20DP86480 221 aa8.24□□□□□ -1.09
CPSF7-212ENST00000489728 PRR20BP86481 221 aa8.24□□□□□ -1.09
CPSF7-212ENST00000489728 PRR20AP86496 221 aa8.24□□□□□ -1.09
CPSF7-212ENST00000489728 NHLH2Q02577 135 aa8.24□□□□□ -1.09
CPSF7-212ENST00000489728 TMEM182Q6ZP80 229 aaPredicted RBP8.24□□□□□ -1.09
CPSF7-212ENST00000489728 OR8I2Q8N0Y5 310 aa8.24□□□□□ -1.09
CPSF7-212ENST00000489728 GBGT1Q8N5D6 347 aa8.24□□□□□ -1.09
CPSF7-212ENST00000489728 STPG3Q8N7X2 389 aa8.24□□□□□ -1.09
CPSF7-212ENST00000489728 SHANK2-AS3Q9BTD1 123 aa8.24□□□□□ -1.09
CPSF7-212ENST00000489728 GGTLC1Q9BX51 225 aa8.24□□□□□ -1.09
CPSF7-212ENST00000489728 SLC25A39Q9BZJ4 359 aaPredicted RBP8.24□□□□□ -1.09
CPSF7-212ENST00000489728 MAP6D1Q9H9H5 199 aa8.24□□□□□ -1.09
CPSF7-212ENST00000489728 HSPB11Q9Y547 144 aa8.24□□□□□ -1.09
CPSF7-212ENST00000489728 IGKV3-7A0A075B6H7 116 aa8.23□□□□□ -1.09
CPSF7-212ENST00000489728 LOC102724200A0A096LPH7 203 aaPredicted RBP8.23□□□□□ -1.09
CPSF7-212ENST00000489728 KIR2DL5BA0A0G2JN68 375 aa8.23□□□□□ -1.09
CPSF7-212ENST00000489728 KIR2DL5BA0A0G2JPC4 375 aa8.23□□□□□ -1.09
CPSF7-212ENST00000489728 RPL7P18124 248 aaKnown RBP8.23□□□□□ -1.09
CPSF7-212ENST00000489728 FGF7P21781 194 aa8.23□□□□□ -1.09
CPSF7-212ENST00000489728 TFPI2P48307 235 aa8.23□□□□□ -1.09
CPSF7-212ENST00000489728 SNRPD3P62318 126 aaKnown RBP8.23□□□□□ -1.09
CPSF7-212ENST00000489728 OPCMLQ14982 345 aa8.23□□□□□ -1.09
CPSF7-212ENST00000489728 Q6ZRG5 221 aa8.23□□□□□ -1.09
CPSF7-212ENST00000489728 SBSPONQ8IVN8 264 aa8.23□□□□□ -1.09
CPSF7-212ENST00000489728 KIR2DL5AQ8N109 375 aa8.23□□□□□ -1.09
CPSF7-212ENST00000489728 OR1L4Q8NGR5 311 aa8.23□□□□□ -1.09
CPSF7-212ENST00000489728 KIR2DL5BQ8NHK3 375 aa8.23□□□□□ -1.09
CPSF7-212ENST00000489728 PFDN5Q99471 154 aa8.23□□□□□ -1.09
CPSF7-212ENST00000489728 ATP5SQ99766 215 aa8.23□□□□□ -1.09
CPSF7-212ENST00000489728 TM2D3Q9BRN9 247 aa8.23□□□□□ -1.09
CPSF7-212ENST00000489728 PARD6GQ9BYG4 376 aaPredicted RBP8.23□□□□□ -1.09
CPSF7-212ENST00000489728 ARL6Q9H0F7 186 aa8.23□□□□□ -1.09
CPSF7-212ENST00000489728 WFDC10AQ9H1F0 79 aa8.23□□□□□ -1.09
CPSF7-212ENST00000489728 ZMAT4Q9H898 229 aa8.23□□□□□ -1.09
CPSF7-212ENST00000489728 COL7A1Q02388 2944 aa8.23□□□□□ -1.09
CPSF7-212ENST00000489728 RBMY1BA6NDE4 496 aaKnown RBP8.22□□□□□ -1.09
CPSF7-212ENST00000489728 RBMY1EA6NEQ0 496 aaKnown RBP8.22□□□□□ -1.09
CPSF7-212ENST00000489728 UBE2CO00762 179 aa8.22□□□□□ -1.09
CPSF7-212ENST00000489728 ISLRO14498 428 aa8.22□□□□□ -1.09
CPSF7-212ENST00000489728 COX7A2P2O60397 106 aa8.22□□□□□ -1.09
CPSF7-212ENST00000489728 OR5G3P0C626 314 aa8.22□□□□□ -1.09
CPSF7-212ENST00000489728 RBMY1DP0C7P1 496 aaKnown RBP8.22□□□□□ -1.09
CPSF7-212ENST00000489728 PSMB3P49720 205 aa8.22□□□□□ -1.09
CPSF7-212ENST00000489728 APOC4P55056 127 aa8.22□□□□□ -1.09
CPSF7-212ENST00000489728 HAGHQ16775 308 aa8.22□□□□□ -1.09
CPSF7-212ENST00000489728 AQP10Q96PS8 301 aa8.22□□□□□ -1.09
CPSF7-212ENST00000489728 SPATA25Q9BR10 227 aa8.22□□□□□ -1.09
CPSF7-212ENST00000489728 NPCDR1Q9BY65 106 aa8.22□□□□□ -1.09
CPSF7-212ENST00000489728 WDR61Q9GZS3 305 aaKnown RBP8.22□□□□□ -1.09
CPSF7-212ENST00000489728 ARV1Q9H2C2 271 aa8.22□□□□□ -1.09
CPSF7-212ENST00000489728 UBQLN2Q9UHD9 624 aa8.22□□□□□ -1.09
CPSF7-212ENST00000489728 C17orf112F2Z3M2 114 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms