RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 ZNF546Q86UE3 836 aa6.22□□□□□ -1.41
SF1-218ENST00000489544 WFDC3Q8IUB2 231 aa6.22□□□□□ -1.41
SF1-218ENST00000489544 ASB13Q8WXK3 278 aa6.22□□□□□ -1.41
SF1-218ENST00000489544 AQP10Q96PS8 301 aa6.22□□□□□ -1.41
SF1-218ENST00000489544 UHRF2Q96PU4 802 aa6.22□□□□□ -1.41
SF1-218ENST00000489544 ATP5SQ99766 215 aa6.22□□□□□ -1.41
SF1-218ENST00000489544 RSG1Q9BU20 258 aa6.22□□□□□ -1.41
SF1-218ENST00000489544 WDR61Q9GZS3 305 aaKnown RBP6.22□□□□□ -1.41
SF1-218ENST00000489544 ARL6Q9H0F7 186 aa6.22□□□□□ -1.41
SF1-218ENST00000489544 WFDC10AQ9H1F0 79 aa6.22□□□□□ -1.41
SF1-218ENST00000489544 TECRQ9NZ01 308 aaKnown RBP6.22□□□□□ -1.41
SF1-218ENST00000489544 TNFSF18Q9UNG2 199 aa6.22□□□□□ -1.41
SF1-218ENST00000489544 MEGF8Q7Z7M0 2845 aa6.21□□□□□ -1.41
SF1-218ENST00000489544 BUB3O43684 328 aa6.21□□□□□ -1.42
SF1-218ENST00000489544 OR5G3P0C626 314 aa6.21□□□□□ -1.42
SF1-218ENST00000489544 EIF2B2P49770 351 aaKnown RBP6.21□□□□□ -1.42
SF1-218ENST00000489544 RPL11P62913 178 aaKnown RBP6.21□□□□□ -1.42
SF1-218ENST00000489544 OPCMLQ14982 345 aa6.21□□□□□ -1.42
SF1-218ENST00000489544 MORN5Q5VZ52 161 aa6.21□□□□□ -1.42
SF1-218ENST00000489544 LCN12Q6JVE5 192 aa6.21□□□□□ -1.42
SF1-218ENST00000489544 C16orf54Q6UWD8 224 aa6.21□□□□□ -1.42
SF1-218ENST00000489544 RBPMS2Q6ZRY4 209 aaKnown RBP6.21□□□□□ -1.42
SF1-218ENST00000489544 Q8N1Y9 231 aa6.21□□□□□ -1.42
SF1-218ENST00000489544 GLMPQ8WWB7 406 aa6.21□□□□□ -1.42
SF1-218ENST00000489544 TMEM37Q8WXS4 190 aa6.21□□□□□ -1.42
SF1-218ENST00000489544 PPP1R14BQ96C90 147 aa6.21□□□□□ -1.42
SF1-218ENST00000489544 SCRT1Q9BWW7 348 aa6.21□□□□□ -1.42
SF1-218ENST00000489544 NPCDR1Q9BY65 106 aa6.21□□□□□ -1.42
SF1-218ENST00000489544 SLC25A22Q9H936 323 aa6.21□□□□□ -1.42
SF1-218ENST00000489544 PXMP4Q9Y6I8 212 aa6.21□□□□□ -1.42
SF1-218ENST00000489544 A0A1W2PS18 150 aa6.2□□□□□ -1.42
SF1-218ENST00000489544 ZNF98A6NK75 572 aa6.2□□□□□ -1.42
SF1-218ENST00000489544 TSPAN4O14817 238 aa6.2□□□□□ -1.42
SF1-218ENST00000489544 HYPMO75409 117 aa6.2□□□□□ -1.42
SF1-218ENST00000489544 EIF3GO75821 320 aaKnown RBP eCLIP6.2□□□□□ -1.42
SF1-218ENST00000489544 SNRPCP09234 159 aaKnown RBP6.2□□□□□ -1.42
SF1-218ENST00000489544 NUP62P37198 522 aaPredicted RBP6.2□□□□□ -1.42
SF1-218ENST00000489544 RPL29P47914 159 aaKnown RBP6.2□□□□□ -1.42
SF1-218ENST00000489544 B2MP61769 119 aa6.2□□□□□ -1.42
SF1-218ENST00000489544 SELENOTP62341 195 aa6.2□□□□□ -1.42
SF1-218ENST00000489544 PRR20EP86478 221 aa6.2□□□□□ -1.42
SF1-218ENST00000489544 PRR20CP86479 221 aa6.2□□□□□ -1.42
SF1-218ENST00000489544 PRR20DP86480 221 aa6.2□□□□□ -1.42
SF1-218ENST00000489544 PRR20BP86481 221 aa6.2□□□□□ -1.42
SF1-218ENST00000489544 PRR20AP86496 221 aa6.2□□□□□ -1.42
SF1-218ENST00000489544 RAB31Q13636 194 aa6.2□□□□□ -1.42
SF1-218ENST00000489544 LAMTOR1Q6IAA8 161 aa6.2□□□□□ -1.42
SF1-218ENST00000489544 FAM24BQ8N5W8 94 aa6.2□□□□□ -1.42
SF1-218ENST00000489544 INO80EQ8NBZ0 244 aaPredicted RBP6.2□□□□□ -1.42
SF1-218ENST00000489544 STXBP6Q8NFX7 210 aa6.2□□□□□ -1.42
SF1-218ENST00000489544 OR2K2Q8NGT1 345 aa6.2□□□□□ -1.42
SF1-218ENST00000489544 NARS2Q96I59 477 aaKnown RBP6.2□□□□□ -1.42
SF1-218ENST00000489544 SLC25A39Q9BZJ4 359 aaPredicted RBP6.2□□□□□ -1.42
SF1-218ENST00000489544 ARV1Q9H2C2 271 aa6.2□□□□□ -1.42
SF1-218ENST00000489544 SLC25A32Q9H2D1 315 aa6.2□□□□□ -1.42
SF1-218ENST00000489544 MS4A6AQ9H2W1 248 aa6.2□□□□□ -1.42
SF1-218ENST00000489544 SLC39A9Q9NUM3 307 aa6.2□□□□□ -1.42
SF1-218ENST00000489544 UBQLN2Q9UHD9 624 aa6.2□□□□□ -1.42
SF1-218ENST00000489544 HIGD1AQ9Y241 93 aa6.2□□□□□ -1.42
SF1-218ENST00000489544 TRAV5A0A0B4J249 113 aa6.19□□□□□ -1.42
SF1-218ENST00000489544 TRAV25A0A0B4J276 109 aa6.19□□□□□ -1.42
SF1-218ENST00000489544 H3BRN7 92 aa6.19□□□□□ -1.42
SF1-218ENST00000489544 COX7A2P2O60397 106 aa6.19□□□□□ -1.42
SF1-218ENST00000489544 IFNA5P01569 189 aa6.19□□□□□ -1.42
SF1-218ENST00000489544 CXCL2P19875 107 aa6.19□□□□□ -1.42
SF1-218ENST00000489544 CD81P60033 236 aa6.19□□□□□ -1.42
SF1-218ENST00000489544 PLP1P60201 277 aa6.19□□□□□ -1.42
SF1-218ENST00000489544 ZNF124Q15973 351 aa6.19□□□□□ -1.42
SF1-218ENST00000489544 DEFB121Q5J5C9 76 aa6.19□□□□□ -1.42
SF1-218ENST00000489544 RPL7L1Q6DKI1 246 aaKnown RBP6.19□□□□□ -1.42
SF1-218ENST00000489544 DEFB125Q8N687 156 aa6.19□□□□□ -1.42
SF1-218ENST00000489544 HSD17B11Q8NBQ5 300 aa6.19□□□□□ -1.42
SF1-218ENST00000489544 MRAPQ8TCY5 172 aa6.19□□□□□ -1.42
SF1-218ENST00000489544 SCGB1C1Q8TD33 95 aa6.19□□□□□ -1.42
SF1-218ENST00000489544 GRAMD2BQ96HH9 432 aa6.19□□□□□ -1.42
SF1-218ENST00000489544 C17orf77Q96MU5 243 aa6.19□□□□□ -1.42
SF1-218ENST00000489544 NEURL2Q9BR09 285 aa6.19□□□□□ -1.42
SF1-218ENST00000489544 SHANK2-AS3Q9BTD1 123 aa6.19□□□□□ -1.42
SF1-218ENST00000489544 MFFQ9GZY8 342 aa6.19□□□□□ -1.42
SF1-218ENST00000489544 TMEM231Q9H6L2 316 aa6.19□□□□□ -1.42
SF1-218ENST00000489544 C19orf73Q9NVV2 129 aa6.19□□□□□ -1.42
SF1-218ENST00000489544 SMAD5-AS1Q9Y6J3 95 aa6.19□□□□□ -1.42
SF1-218ENST00000489544 SORL1Q92673 2214 aa6.19□□□□□ -1.42
SF1-218ENST00000489544 CFDP00746 253 aaPredicted RBP6.18□□□□□ -1.42
SF1-218ENST00000489544 PRB4P10163 310 aaPredicted RBP6.18□□□□□ -1.42
SF1-218ENST00000489544 BMI1P35226 326 aa6.18□□□□□ -1.42
SF1-218ENST00000489544 ODF3L2Q3SX64 289 aa6.18□□□□□ -1.42
SF1-218ENST00000489544 C10orf113Q5VZT2 155 aa6.18□□□□□ -1.42
SF1-218ENST00000489544 SPATA31B1PQ5VZV4 182 aa6.18□□□□□ -1.42
SF1-218ENST00000489544 SIGLEC15Q6ZMC9 328 aa6.18□□□□□ -1.42
SF1-218ENST00000489544 Q6ZRG5 221 aa6.18□□□□□ -1.42
SF1-218ENST00000489544 LINC00305Q7Z4B0 112 aa6.18□□□□□ -1.42
SF1-218ENST00000489544 AKAP14Q86UN6 197 aa6.18□□□□□ -1.42
SF1-218ENST00000489544 TCTE3Q8IZS6 198 aa6.18□□□□□ -1.42
SF1-218ENST00000489544 OR8I2Q8N0Y5 310 aa6.18□□□□□ -1.42
SF1-218ENST00000489544 ZNF709Q8N972 641 aa6.18□□□□□ -1.42
SF1-218ENST00000489544 SPAG8Q99932 426 aaPredicted RBP6.18□□□□□ -1.42
SF1-218ENST00000489544 SH3BGRL3Q9H299 93 aa6.18□□□□□ -1.42
SF1-218ENST00000489544 DNAJC4Q9NNZ3 241 aa6.18□□□□□ -1.42
SF1-218ENST00000489544 CYTL1Q9NRR1 136 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms