RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 MED4Q9NPJ6 270 aa9.88□□□□□ -0.83
UFD1-209ENST00000489406 H7BYZ3 331 aa9.87□□□□□ -0.83
UFD1-209ENST00000489406 CASQ2O14958 399 aaPredicted RBP9.87□□□□□ -0.83
UFD1-209ENST00000489406 LECT2O14960 151 aa9.87□□□□□ -0.83
UFD1-209ENST00000489406 PSMB9P28065 219 aa9.87□□□□□ -0.83
UFD1-209ENST00000489406 SUPT4H1P63272 117 aaKnown RBP9.87□□□□□ -0.83
UFD1-209ENST00000489406 SAMD13Q5VXD3 122 aa9.87□□□□□ -0.83
UFD1-209ENST00000489406 NEGR1Q7Z3B1 354 aa9.87□□□□□ -0.83
UFD1-209ENST00000489406 OR8I2Q8N0Y5 310 aa9.87□□□□□ -0.83
UFD1-209ENST00000489406 MRGPRFQ96AM1 343 aa9.87□□□□□ -0.83
UFD1-209ENST00000489406 PPP1R14DQ9NXH3 145 aa9.87□□□□□ -0.83
UFD1-209ENST00000489406 IFITM5A6NNB3 132 aa9.86□□□□□ -0.83
UFD1-209ENST00000489406 NXPH3O95157 252 aa9.86□□□□□ -0.83
UFD1-209ENST00000489406 MEOX2P50222 304 aa9.86□□□□□ -0.83
UFD1-209ENST00000489406 MRPL23Q16540 153 aaKnown RBP9.86□□□□□ -0.83
UFD1-209ENST00000489406 C1orf194Q5T5A4 169 aa9.86□□□□□ -0.83
UFD1-209ENST00000489406 OR8G2PQ6IF36 304 aa9.86□□□□□ -0.83
UFD1-209ENST00000489406 HOGA1Q86XE5 327 aa9.86□□□□□ -0.83
UFD1-209ENST00000489406 CCDC197Q8NCU1 140 aa9.86□□□□□ -0.83
UFD1-209ENST00000489406 NPIPB3Q92617 1050 aa9.86□□□□□ -0.83
UFD1-209ENST00000489406 ACY3Q96HD9 319 aa9.86□□□□□ -0.83
UFD1-209ENST00000489406 PSORS1C1Q9UIG5 152 aa9.86□□□□□ -0.83
UFD1-209ENST00000489406 A0A0U1RQV1 116 aa9.85□□□□□ -0.83
UFD1-209ENST00000489406 PRAF2O60831 178 aa9.85□□□□□ -0.83
UFD1-209ENST00000489406 SLC25A4P12235 298 aa9.85□□□□□ -0.83
UFD1-209ENST00000489406 RNF182Q8N6D2 247 aa9.85□□□□□ -0.83
UFD1-209ENST00000489406 SLC24A4Q8NFF2 622 aa9.85□□□□□ -0.83
UFD1-209ENST00000489406 OR52E5Q8NH55 327 aa9.85□□□□□ -0.83
UFD1-209ENST00000489406 C9orf16Q9BUW7 83 aa9.85□□□□□ -0.83
UFD1-209ENST00000489406 MND1Q9BWT6 205 aa9.85□□□□□ -0.83
UFD1-209ENST00000489406 ENY2Q9NPA8 101 aa9.85□□□□□ -0.83
UFD1-209ENST00000489406 IBA57-AS1B1ANH7 110 aa9.84□□□□□ -0.83
UFD1-209ENST00000489406 CCNKO75909 580 aa9.84□□□□□ -0.83
UFD1-209ENST00000489406 CBX5P45973 191 aa9.84□□□□□ -0.83
UFD1-209ENST00000489406 HIST1H1AQ02539 215 aaPredicted RBP9.84□□□□□ -0.83
UFD1-209ENST00000489406 SPHARQ15513 63 aa9.84□□□□□ -0.83
UFD1-209ENST00000489406 BSXQ3C1V8 233 aa9.84□□□□□ -0.83
UFD1-209ENST00000489406 LCE2AQ5TA79 106 aaPredicted RBP9.84□□□□□ -0.83
UFD1-209ENST00000489406 UFD1Q92890 307 aa9.84□□□□□ -0.83
UFD1-209ENST00000489406 PPP1R14BQ96C90 147 aa9.84□□□□□ -0.83
UFD1-209ENST00000489406 RSG1Q9BU20 258 aa9.84□□□□□ -0.83
UFD1-209ENST00000489406 PDCD10Q9BUL8 212 aa9.84□□□□□ -0.83
UFD1-209ENST00000489406 OR5AC1P0C628 307 aa9.83□□□□□ -0.84
UFD1-209ENST00000489406 HSMCR30P0CW71 290 aa9.83□□□□□ -0.84
UFD1-209ENST00000489406 ZNF415Q09FC8 603 aa9.83□□□□□ -0.84
UFD1-209ENST00000489406 PHLDA2Q53GA4 152 aa9.83□□□□□ -0.84
UFD1-209ENST00000489406 IDNKQ5T6J7 187 aa9.83□□□□□ -0.84
UFD1-209ENST00000489406 DPH3P1Q9H4G8 78 aa9.83□□□□□ -0.84
UFD1-209ENST00000489406 RBFOX3A6NFN3 312 aa9.82□□□□□ -0.84
UFD1-209ENST00000489406 GPR31O00270 319 aa9.82□□□□□ -0.84
UFD1-209ENST00000489406 IGHV3-53P01767 116 aa9.82□□□□□ -0.84
UFD1-209ENST00000489406 CDKN1BP46527 198 aa9.82□□□□□ -0.84
UFD1-209ENST00000489406 FABP5Q01469 135 aa9.82□□□□□ -0.84
UFD1-209ENST00000489406 DAZ2Q13117 558 aaKnown RBP9.82□□□□□ -0.84
UFD1-209ENST00000489406 ZNF738Q8NE65 137 aa9.82□□□□□ -0.84
UFD1-209ENST00000489406 OR5AP2Q8NGF4 316 aa9.82□□□□□ -0.84
UFD1-209ENST00000489406 IL22RA2Q969J5 263 aa9.82□□□□□ -0.84
UFD1-209ENST00000489406 ZNF2Q9BSG1 426 aaPredicted RBP9.82□□□□□ -0.84
UFD1-209ENST00000489406 PRO0255Q9UI72 69 aa9.82□□□□□ -0.84
UFD1-209ENST00000489406 FUT9Q9Y231 359 aa9.82□□□□□ -0.84
UFD1-209ENST00000489406 LSM2Q9Y333 95 aaKnown RBP9.82□□□□□ -0.84
UFD1-209ENST00000489406 RRP15Q9Y3B9 282 aaKnown RBP9.82□□□□□ -0.84
UFD1-209ENST00000489406 TRAV8-2A0A0B4J237 113 aa9.81□□□□□ -0.84
UFD1-209ENST00000489406 PDCD5O14737 125 aa9.81□□□□□ -0.84
UFD1-209ENST00000489406 GYPEP15421 78 aa9.81□□□□□ -0.84
UFD1-209ENST00000489406 HTR2BP41595 481 aa9.81□□□□□ -0.84
UFD1-209ENST00000489406 GALR1P47211 349 aa9.81□□□□□ -0.84
UFD1-209ENST00000489406 CRYBA4P53673 196 aa9.81□□□□□ -0.84
UFD1-209ENST00000489406 LYZP61626 148 aa9.81□□□□□ -0.84
UFD1-209ENST00000489406 PSG3Q16557 428 aa9.81□□□□□ -0.84
UFD1-209ENST00000489406 LAIR2Q6ISS4 152 aa9.81□□□□□ -0.84
UFD1-209ENST00000489406 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.81□□□□□ -0.84
UFD1-209ENST00000489406 C8orf49Q96NF6 230 aa9.81□□□□□ -0.84
UFD1-209ENST00000489406 EHFQ9NZC4 300 aa9.81□□□□□ -0.84
UFD1-209ENST00000489406 TRGV1A0A0A0MS02 117 aa9.8□□□□□ -0.84
UFD1-209ENST00000489406 TAS2R20P59543 309 aa9.8□□□□□ -0.84
UFD1-209ENST00000489406 TRAM1Q15629 374 aa9.8□□□□□ -0.84
UFD1-209ENST00000489406 DHRS11Q6UWP2 260 aa9.8□□□□□ -0.84
UFD1-209ENST00000489406 TBC1D26Q86UD7 250 aa9.8□□□□□ -0.84
UFD1-209ENST00000489406 OR8A1Q8NGG7 326 aa9.8□□□□□ -0.84
UFD1-209ENST00000489406 TMEM37Q8WXS4 190 aa9.8□□□□□ -0.84
UFD1-209ENST00000489406 PAXXQ9BUH6 204 aa9.8□□□□□ -0.84
UFD1-209ENST00000489406 FXYD6Q9H0Q3 95 aa9.8□□□□□ -0.84
UFD1-209ENST00000489406 SLC25A32Q9H2D1 315 aa9.8□□□□□ -0.84
UFD1-209ENST00000489406 HHLA3Q9XRX5 114 aa9.8□□□□□ -0.84
UFD1-209ENST00000489406 IGHV3-38A0A0C4DH36 116 aa9.79□□□□□ -0.84
UFD1-209ENST00000489406 IGKV1-5P01602 117 aa9.79□□□□□ -0.84
UFD1-209ENST00000489406 SRIP30626 198 aa9.79□□□□□ -0.84
UFD1-209ENST00000489406 RFX2P48378 723 aa9.79□□□□□ -0.84
UFD1-209ENST00000489406 ZNF90Q03938 601 aa9.79□□□□□ -0.84
UFD1-209ENST00000489406 TDRG1Q3Y452 100 aa9.79□□□□□ -0.84
UFD1-209ENST00000489406 RNASEH2CQ8TDP1 164 aaKnown RBP9.79□□□□□ -0.84
UFD1-209ENST00000489406 CYGBQ8WWM9 190 aa9.79□□□□□ -0.84
UFD1-209ENST00000489406 SLC25A22Q9H936 323 aa9.79□□□□□ -0.84
UFD1-209ENST00000489406 E5RGE8 158 aa9.78□□□□□ -0.84
UFD1-209ENST00000489406 SCGNO76038 276 aa9.78□□□□□ -0.84
UFD1-209ENST00000489406 PSMA1P25786 263 aaKnown RBP9.78□□□□□ -0.84
UFD1-209ENST00000489406 FGL1Q08830 312 aa9.78□□□□□ -0.84
UFD1-209ENST00000489406 MORN5Q5VZ52 161 aa9.78□□□□□ -0.84
UFD1-209ENST00000489406 ETFRF1Q6IPR1 90 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms