RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 PFDN2Q9UHV9 154 aa8.82□□□□□ -1
CPSF3-204ENST00000489403 F6UB75 175 aa8.81□□□□□ -1
CPSF3-204ENST00000489403 IFNA21P01568 189 aa8.81□□□□□ -1
CPSF3-204ENST00000489403 GPX4P36969 197 aaPredicted RBP8.81□□□□□ -1
CPSF3-204ENST00000489403 PAX9P55771 341 aa8.81□□□□□ -1
CPSF3-204ENST00000489403 Q6ZR54 194 aa8.81□□□□□ -1
CPSF3-204ENST00000489403 C1orf158Q8N1D5 194 aa8.81□□□□□ -1
CPSF3-204ENST00000489403 DIRAS2Q96HU8 199 aa8.81□□□□□ -1
CPSF3-204ENST00000489403 SCP2D1Q9UJQ7 156 aa8.81□□□□□ -1
CPSF3-204ENST00000489403 ABCA13Q86UQ4 5058 aa8.81□□□□□ -1
CPSF3-204ENST00000489403 IGKV1OR2-108A0A075B7D4 117 aa8.8□□□□□ -1
CPSF3-204ENST00000489403 A0A0J9YX75 114 aa8.8□□□□□ -1
CPSF3-204ENST00000489403 LOC102723971A0A1B0GUV8 181 aa8.8□□□□□ -1
CPSF3-204ENST00000489403 ISLRO14498 428 aa8.8□□□□□ -1
CPSF3-204ENST00000489403 HTN3P15516 51 aa8.8□□□□□ -1
CPSF3-204ENST00000489403 AKR1C4P17516 323 aa8.8□□□□□ -1
CPSF3-204ENST00000489403 PSG9Q00887 426 aa8.8□□□□□ -1
CPSF3-204ENST00000489403 OR2F1Q13607 317 aa8.8□□□□□ -1
CPSF3-204ENST00000489403 FAM78BQ5VT40 261 aa8.8□□□□□ -1
CPSF3-204ENST00000489403 SPATA31B1PQ5VZV4 182 aa8.8□□□□□ -1
CPSF3-204ENST00000489403 OR1S1Q8NH92 325 aa8.8□□□□□ -1
CPSF3-204ENST00000489403 C20orf173Q96LM9 149 aa8.8□□□□□ -1
CPSF3-204ENST00000489403 GOLT1BQ9Y3E0 138 aa8.8□□□□□ -1
CPSF3-204ENST00000489403 YTHDF2Q9Y5A9 579 aaKnown RBP8.8□□□□□ -1
CPSF3-204ENST00000489403 NACAE9PAV3 2078 aa8.8□□□□□ -1
CPSF3-204ENST00000489403 A8MTW9 85 aa8.79□□□□□ -1
CPSF3-204ENST00000489403 SNRPGP15A8MWD9 76 aa8.79□□□□□ -1
CPSF3-204ENST00000489403 PITX3O75364 302 aa8.79□□□□□ -1
CPSF3-204ENST00000489403 HBE1P02100 147 aa8.79□□□□□ -1
CPSF3-204ENST00000489403 FABP1P07148 127 aa8.79□□□□□ -1
CPSF3-204ENST00000489403 IAPPP10997 89 aa8.79□□□□□ -1
CPSF3-204ENST00000489403 ALDH3B2P48448 385 aa8.79□□□□□ -1
CPSF3-204ENST00000489403 ATP5IP56385 69 aaPredicted RBP8.79□□□□□ -1
CPSF3-204ENST00000489403 OXA1LQ15070 435 aa8.79□□□□□ -1
CPSF3-204ENST00000489403 EBLN2Q6P2I7 272 aa8.79□□□□□ -1
CPSF3-204ENST00000489403 GPR141Q7Z602 305 aa8.79□□□□□ -1
CPSF3-204ENST00000489403 OR8I2Q8N0Y5 310 aa8.79□□□□□ -1
CPSF3-204ENST00000489403 PPP1R14BQ96C90 147 aa8.79□□□□□ -1
CPSF3-204ENST00000489403 SCGB3A2Q96PL1 93 aa8.79□□□□□ -1
CPSF3-204ENST00000489403 TRGV9Q99603 122 aa8.79□□□□□ -1
CPSF3-204ENST00000489403 C7orf50Q9BRJ6 194 aaKnown RBP8.79□□□□□ -1
CPSF3-204ENST00000489403 MCUBQ9NWR8 336 aa8.79□□□□□ -1
CPSF3-204ENST00000489403 RABL2AQ9UBK7 228 aaPredicted RBP8.79□□□□□ -1
CPSF3-204ENST00000489403 RABL2BQ9UNT1 228 aa8.79□□□□□ -1
CPSF3-204ENST00000489403 ANXA3P12429 323 aa8.78□□□□□ -1
CPSF3-204ENST00000489403 RAB11AP62491 216 aa8.78□□□□□ -1
CPSF3-204ENST00000489403 SRPXP78539 464 aa8.78□□□□□ -1
CPSF3-204ENST00000489403 RRN3P1Q2M238 152 aa8.78□□□□□ -1
CPSF3-204ENST00000489403 RNF212Q495C1 297 aa8.78□□□□□ -1
CPSF3-204ENST00000489403 TMEM88Q6PEY1 159 aa8.78□□□□□ -1
CPSF3-204ENST00000489403 THAP8Q8NA92 274 aa8.78□□□□□ -1
CPSF3-204ENST00000489403 DYNC2LI1Q8TCX1 351 aa8.78□□□□□ -1
CPSF3-204ENST00000489403 C16orf92Q96LL3 132 aa8.78□□□□□ -1
CPSF3-204ENST00000489403 C17orf77Q96MU5 243 aa8.78□□□□□ -1
CPSF3-204ENST00000489403 MRPS26Q9BYN8 205 aaKnown RBP8.78□□□□□ -1
CPSF3-204ENST00000489403 SLC25A32Q9H2D1 315 aa8.78□□□□□ -1
CPSF3-204ENST00000489403 RPRMQ9NS64 109 aa8.78□□□□□ -1
CPSF3-204ENST00000489403 CCDC59Q9P031 241 aaKnown RBP8.78□□□□□ -1
CPSF3-204ENST00000489403 DOK5Q9P104 306 aa8.78□□□□□ -1
CPSF3-204ENST00000489403 DUXBA0A1W2PPF3 345 aa8.77□□□□□ -1.01
CPSF3-204ENST00000489403 MEOX2P50222 304 aa8.77□□□□□ -1.01
CPSF3-204ENST00000489403 DAD1P61803 113 aa8.77□□□□□ -1.01
CPSF3-204ENST00000489403 SAMD13Q5VXD3 122 aa8.77□□□□□ -1.01
CPSF3-204ENST00000489403 AMTNQ6UX39 209 aa8.77□□□□□ -1.01
CPSF3-204ENST00000489403 ZNF575Q86XF7 245 aa8.77□□□□□ -1.01
CPSF3-204ENST00000489403 MAGT1Q9H0U3 335 aa8.77□□□□□ -1.01
CPSF3-204ENST00000489403 SLC25A22Q9H936 323 aa8.77□□□□□ -1.01
CPSF3-204ENST00000489403 RSL24D1Q9UHA3 163 aaKnown RBP8.77□□□□□ -1.01
CPSF3-204ENST00000489403 PAIP2BQ9ULR5 123 aaKnown RBP8.77□□□□□ -1.01
CPSF3-204ENST00000489403 MUC4Q99102 2169 aa8.77□□□□□ -1.01
CPSF3-204ENST00000489403 ZNF98A6NK75 572 aa8.76□□□□□ -1.01
CPSF3-204ENST00000489403 PRSS46E5RG02 174 aa8.76□□□□□ -1.01
CPSF3-204ENST00000489403 GALR1P47211 349 aa8.76□□□□□ -1.01
CPSF3-204ENST00000489403 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.76□□□□□ -1.01
CPSF3-204ENST00000489403 IGF2BP2-AS1Q96M15 143 aa8.76□□□□□ -1.01
CPSF3-204ENST00000489403 SLC45A2Q9UMX9 530 aa8.76□□□□□ -1.01
CPSF3-204ENST00000489403 CRXO43186 299 aaPredicted RBP8.75□□□□□ -1.01
CPSF3-204ENST00000489403 CFDP00746 253 aaPredicted RBP8.75□□□□□ -1.01
CPSF3-204ENST00000489403 PRM2P04554 102 aa8.75□□□□□ -1.01
CPSF3-204ENST00000489403 GATA2P23769 480 aaPredicted RBP8.75□□□□□ -1.01
CPSF3-204ENST00000489403 SOHLH1Q5JUK2 328 aa8.75□□□□□ -1.01
CPSF3-204ENST00000489403 GGNBP1Q5YKI7 109 aa8.75□□□□□ -1.01
CPSF3-204ENST00000489403 TMEM182Q6ZP80 229 aaPredicted RBP8.75□□□□□ -1.01
CPSF3-204ENST00000489403 TMED4Q7Z7H5 227 aa8.75□□□□□ -1.01
CPSF3-204ENST00000489403 LRTM2Q8N967 370 aa8.75□□□□□ -1.01
CPSF3-204ENST00000489403 RAB2BQ8WUD1 216 aa8.75□□□□□ -1.01
CPSF3-204ENST00000489403 SOSTQ9BQB4 213 aa8.75□□□□□ -1.01
CPSF3-204ENST00000489403 TMEM208Q9BTX3 173 aa8.75□□□□□ -1.01
CPSF3-204ENST00000489403 RSG1Q9BU20 258 aa8.75□□□□□ -1.01
CPSF3-204ENST00000489403 HSPG2P98160 4391 aa8.74□□□□□ -1.01
CPSF3-204ENST00000489403 PIGBOS1A0A0B4J2F0 54 aa8.74□□□□□ -1.01
CPSF3-204ENST00000489403 ZNF705GA8MUZ8 300 aaPredicted RBP8.74□□□□□ -1.01
CPSF3-204ENST00000489403 M0R2Z0 102 aa8.74□□□□□ -1.01
CPSF3-204ENST00000489403 MED6O75586 246 aa8.74□□□□□ -1.01
CPSF3-204ENST00000489403 SLC25A6P12236 298 aa8.74□□□□□ -1.01
CPSF3-204ENST00000489403 ORM2P19652 201 aa8.74□□□□□ -1.01
CPSF3-204ENST00000489403 CNN1P51911 297 aaKnown RBP8.74□□□□□ -1.01
CPSF3-204ENST00000489403 SPINK13Q1W4C9 94 aa8.74□□□□□ -1.01
CPSF3-204ENST00000489403 TMEM128Q5BJH2 165 aa8.74□□□□□ -1.01
CPSF3-204ENST00000489403 C1orf134Q5TEV5 83 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms