RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 LGALS4P56470 323 aa6.71□□□□□ -1.34
VTI1A-207ENST00000489357 ARF6P62330 175 aa6.71□□□□□ -1.34
VTI1A-207ENST00000489357 C5orf64Q2M2E5 130 aa6.71□□□□□ -1.34
VTI1A-207ENST00000489357 KLK9Q2XQG4 91 aa6.71□□□□□ -1.34
VTI1A-207ENST00000489357 ACTL10Q5JWF8 245 aa6.71□□□□□ -1.34
VTI1A-207ENST00000489357 Q5PR19 223 aa6.71□□□□□ -1.34
VTI1A-207ENST00000489357 HCP5Q6MZN7 132 aa6.71□□□□□ -1.34
VTI1A-207ENST00000489357 Q8N6K4 173 aa6.71□□□□□ -1.34
VTI1A-207ENST00000489357 OR5AU1Q8NGC0 362 aa6.71□□□□□ -1.34
VTI1A-207ENST00000489357 OCC1Q8TAD7 63 aa6.71□□□□□ -1.34
VTI1A-207ENST00000489357 RITA1Q96K30 269 aa6.71□□□□□ -1.34
VTI1A-207ENST00000489357 DERL1Q9BUN8 251 aa6.71□□□□□ -1.34
VTI1A-207ENST00000489357 SIRPDQ9H106 197 aa6.71□□□□□ -1.34
VTI1A-207ENST00000489357 IL36BQ9NZH7 164 aa6.71□□□□□ -1.34
VTI1A-207ENST00000489357 KLK9Q9UKQ9 250 aa6.71□□□□□ -1.34
VTI1A-207ENST00000489357 WNK2Q9Y3S1 2297 aa6.71□□□□□ -1.34
VTI1A-207ENST00000489357 IGHV3-72A0A0B4J1Y9 119 aa6.7□□□□□ -1.34
VTI1A-207ENST00000489357 A0A1W2PPQ1 181 aa6.7□□□□□ -1.34
VTI1A-207ENST00000489357 GGTLC3B5MD39 225 aa6.7□□□□□ -1.34
VTI1A-207ENST00000489357 I3L2K1 104 aa6.7□□□□□ -1.34
VTI1A-207ENST00000489357 CNIH1O95406 144 aa6.7□□□□□ -1.34
VTI1A-207ENST00000489357 GCGP01275 180 aa6.7□□□□□ -1.34
VTI1A-207ENST00000489357 MT-ND6P03923 174 aa6.7□□□□□ -1.34
VTI1A-207ENST00000489357 TRGC1P0CF51 173 aa6.7□□□□□ -1.34
VTI1A-207ENST00000489357 IGLC1P0CG04 106 aa6.7□□□□□ -1.34
VTI1A-207ENST00000489357 FAM106CPP0CH98 169 aa6.7□□□□□ -1.34
VTI1A-207ENST00000489357 BRS3P32247 399 aa6.7□□□□□ -1.34
VTI1A-207ENST00000489357 MYCNOSP40205 109 aa6.7□□□□□ -1.34
VTI1A-207ENST00000489357 PDLIM4P50479 330 aa6.7□□□□□ -1.34
VTI1A-207ENST00000489357 CNN1P51911 297 aaKnown RBP6.7□□□□□ -1.34
VTI1A-207ENST00000489357 YPEL3P61236 119 aaPredicted RBP6.7□□□□□ -1.34
VTI1A-207ENST00000489357 SSBP2P81877 361 aaPredicted RBP6.7□□□□□ -1.34
VTI1A-207ENST00000489357 MLANAQ16655 118 aa6.7□□□□□ -1.34
VTI1A-207ENST00000489357 RASL11AQ6T310 242 aa6.7□□□□□ -1.34
VTI1A-207ENST00000489357 FAM231DQ6ZW35 169 aa6.7□□□□□ -1.34
VTI1A-207ENST00000489357 LINC00305Q7Z4B0 112 aa6.7□□□□□ -1.34
VTI1A-207ENST00000489357 VMO1Q7Z5L0 202 aa6.7□□□□□ -1.34
VTI1A-207ENST00000489357 TMEM183AQ8IXX5 376 aa6.7□□□□□ -1.34
VTI1A-207ENST00000489357 LYPD1Q8N2G4 141 aa6.7□□□□□ -1.34
VTI1A-207ENST00000489357 FAM168AQ92567 244 aa6.7□□□□□ -1.34
VTI1A-207ENST00000489357 FRZBQ92765 325 aa6.7□□□□□ -1.34
VTI1A-207ENST00000489357 TMEM68Q96MH6 324 aa6.7□□□□□ -1.34
VTI1A-207ENST00000489357 TXN2Q99757 166 aa6.7□□□□□ -1.34
VTI1A-207ENST00000489357 RASL11BQ9BPW5 248 aa6.7□□□□□ -1.34
VTI1A-207ENST00000489357 FBXL15Q9H469 300 aa6.7□□□□□ -1.34
VTI1A-207ENST00000489357 C2CD3Q4AC94 2353 aa6.7□□□□□ -1.34
VTI1A-207ENST00000489357 NAV3Q8IVL0 2385 aa6.7□□□□□ -1.34
VTI1A-207ENST00000489357 SETD2Q9BYW2 2564 aaPredicted RBP6.7□□□□□ -1.34
VTI1A-207ENST00000489357 ARHGAP32A7KAX9 2087 aa6.69□□□□□ -1.34
VTI1A-207ENST00000489357 HIST1H1BP16401 226 aaKnown RBP6.69□□□□□ -1.34
VTI1A-207ENST00000489357 CNTFRP26992 372 aa6.69□□□□□ -1.34
VTI1A-207ENST00000489357 CRYBB3P26998 211 aa6.69□□□□□ -1.34
VTI1A-207ENST00000489357 FCGR2BP31994 310 aaPredicted RBP6.69□□□□□ -1.34
VTI1A-207ENST00000489357 MFAP2P55001 183 aa6.69□□□□□ -1.34
VTI1A-207ENST00000489357 NDUFA6P56556 154 aa6.69□□□□□ -1.34
VTI1A-207ENST00000489357 SUMO1P63165 101 aaKnown RBP6.69□□□□□ -1.34
VTI1A-207ENST00000489357 ZNF90Q03938 601 aa6.69□□□□□ -1.34
VTI1A-207ENST00000489357 FXYD3Q14802 87 aa6.69□□□□□ -1.34
VTI1A-207ENST00000489357 CLEC12BQ2HXU8 276 aa6.69□□□□□ -1.34
VTI1A-207ENST00000489357 RPEL1Q2QD12 228 aa6.69□□□□□ -1.34
VTI1A-207ENST00000489357 CENPWQ5EE01 88 aa6.69□□□□□ -1.34
VTI1A-207ENST00000489357 WDR73Q6P4I2 378 aa6.69□□□□□ -1.34
VTI1A-207ENST00000489357 PATE2Q6UY27 113 aa6.69□□□□□ -1.34
VTI1A-207ENST00000489357 TTC9CQ8N5M4 171 aa6.69□□□□□ -1.34
VTI1A-207ENST00000489357 ARL6IP6Q8N6S5 226 aa6.69□□□□□ -1.34
VTI1A-207ENST00000489357 C5orf17Q8NAS9 161 aa6.69□□□□□ -1.34
VTI1A-207ENST00000489357 SGMS2Q8NHU3 365 aa6.69□□□□□ -1.34
VTI1A-207ENST00000489357 C10orf105Q8TEF2 133 aa6.69□□□□□ -1.34
VTI1A-207ENST00000489357 FXYD5Q96DB9 178 aa6.69□□□□□ -1.34
VTI1A-207ENST00000489357 IGF2BP2-AS1Q96M15 143 aa6.69□□□□□ -1.34
VTI1A-207ENST00000489357 Q96MF0 132 aa6.69□□□□□ -1.34
VTI1A-207ENST00000489357 JMJD8Q96S16 334 aa6.69□□□□□ -1.34
VTI1A-207ENST00000489357 ATP6V0BQ99437 205 aa6.69□□□□□ -1.34
VTI1A-207ENST00000489357 HIGD1AQ9Y241 93 aa6.69□□□□□ -1.34
VTI1A-207ENST00000489357 KLF12Q9Y4X4 402 aa6.69□□□□□ -1.34
VTI1A-207ENST00000489357 TNCP24821 2201 aa6.69□□□□□ -1.34
VTI1A-207ENST00000489357 TRAV20A0A0B4J274 112 aa6.68□□□□□ -1.34
VTI1A-207ENST00000489357 TRBV6-1A0A0K0K1D8 114 aa6.68□□□□□ -1.34
VTI1A-207ENST00000489357 PEX7O00628 323 aa6.68□□□□□ -1.34
VTI1A-207ENST00000489357 LY6HO94772 140 aa6.68□□□□□ -1.34
VTI1A-207ENST00000489357 TOX4O94842 621 aa6.68□□□□□ -1.34
VTI1A-207ENST00000489357 TOMM40O96008 361 aa6.68□□□□□ -1.34
VTI1A-207ENST00000489357 HLA-DRB1P01911 266 aa6.68□□□□□ -1.34
VTI1A-207ENST00000489357 REG1AP05451 166 aa6.68□□□□□ -1.34
VTI1A-207ENST00000489357 GP9P14770 177 aa6.68□□□□□ -1.34
VTI1A-207ENST00000489357 GATA2P23769 480 aaPredicted RBP6.68□□□□□ -1.34
VTI1A-207ENST00000489357 ERVFC1-1P60608 527 aa6.68□□□□□ -1.34
VTI1A-207ENST00000489357 TMEM183BQ1AE95 376 aa6.68□□□□□ -1.34
VTI1A-207ENST00000489357 ZNF329Q86UD4 541 aa6.68□□□□□ -1.34
VTI1A-207ENST00000489357 HIST3H2BBQ8N257 126 aa6.68□□□□□ -1.34
VTI1A-207ENST00000489357 CIARTQ8N365 385 aaPredicted RBP6.68□□□□□ -1.34
VTI1A-207ENST00000489357 ARPC1AQ92747 370 aa6.68□□□□□ -1.34
VTI1A-207ENST00000489357 FMC1Q96HJ9 113 aa6.68□□□□□ -1.34
VTI1A-207ENST00000489357 SMR3AQ99954 134 aa6.68□□□□□ -1.34
VTI1A-207ENST00000489357 ATG101Q9BSB4 218 aa6.68□□□□□ -1.34
VTI1A-207ENST00000489357 MRPL27Q9P0M9 148 aaKnown RBP6.68□□□□□ -1.34
VTI1A-207ENST00000489357 NSD1Q96L73 2696 aaPredicted RBP6.68□□□□□ -1.34
VTI1A-207ENST00000489357 SONP18583 2426 aaKnown RBP6.68□□□□□ -1.34
VTI1A-207ENST00000489357 ANK3Q12955 4377 aaKnown RBP6.67□□□□□ -1.34
VTI1A-207ENST00000489357 IGLV11-55A0A075B6I3 123 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms