RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 VAMP2P63027 116 aa17.65■□□□□ 0.42
PTPN18-213ENST00000489215 OR8I2Q8N0Y5 310 aa17.65■□□□□ 0.42
PTPN18-213ENST00000489215 SEC22CQ9BRL7 303 aa17.65■□□□□ 0.42
PTPN18-213ENST00000489215 GGACTQ9BVM4 153 aa17.65■□□□□ 0.42
PTPN18-213ENST00000489215 GPN1Q9HCN4 374 aaPredicted RBP17.65■□□□□ 0.42
PTPN18-213ENST00000489215 MGAT4CQ9UBM8 478 aa17.65■□□□□ 0.42
PTPN18-213ENST00000489215 SMCO3A2RU48 225 aa17.64■□□□□ 0.41
PTPN18-213ENST00000489215 MBPP02686 304 aaPredicted RBP17.64■□□□□ 0.41
PTPN18-213ENST00000489215 C2orf50Q96LR7 162 aa17.64■□□□□ 0.41
PTPN18-213ENST00000489215 CA1P00915 261 aaPredicted RBP17.63■□□□□ 0.41
PTPN18-213ENST00000489215 METTL15P1P0C7V9 234 aa17.63■□□□□ 0.41
PTPN18-213ENST00000489215 PVALBP20472 110 aaPredicted RBP17.63■□□□□ 0.41
PTPN18-213ENST00000489215 PSMG4Q5JS54 123 aa17.63■□□□□ 0.41
PTPN18-213ENST00000489215 GSG1LQ6UXU4 331 aa17.63■□□□□ 0.41
PTPN18-213ENST00000489215 TRPT1Q86TN4 253 aaKnown RBP17.63■□□□□ 0.41
PTPN18-213ENST00000489215 GPR82Q96P67 336 aa17.63■□□□□ 0.41
PTPN18-213ENST00000489215 RARRES2Q99969 163 aa17.63■□□□□ 0.41
PTPN18-213ENST00000489215 TMEM147Q9BVK8 224 aa17.63■□□□□ 0.41
PTPN18-213ENST00000489215 RNF24Q9Y225 148 aa17.63■□□□□ 0.41
PTPN18-213ENST00000489215 RCL1Q9Y2P8 373 aaKnown RBP17.63■□□□□ 0.41
PTPN18-213ENST00000489215 C7orf66A4D0T2 115 aa17.62■□□□□ 0.41
PTPN18-213ENST00000489215 CCSO14618 274 aa17.62■□□□□ 0.41
PTPN18-213ENST00000489215 MEOX2P50222 304 aa17.62■□□□□ 0.41
PTPN18-213ENST00000489215 NUTF2P61970 127 aaKnown RBP17.62■□□□□ 0.41
PTPN18-213ENST00000489215 CYP2G1PQ6ZSU1 146 aa17.62■□□□□ 0.41
PTPN18-213ENST00000489215 ORM2P19652 201 aa17.61■□□□□ 0.41
PTPN18-213ENST00000489215 GALR1P47211 349 aa17.61■□□□□ 0.41
PTPN18-213ENST00000489215 ACTL10Q5JWF8 245 aa17.61■□□□□ 0.41
PTPN18-213ENST00000489215 TEPPQ6URK8 271 aa17.61■□□□□ 0.41
PTPN18-213ENST00000489215 A0A0J9YWU9 116 aa17.6■□□□□ 0.41
PTPN18-213ENST00000489215 DEFA1P59665 94 aa17.6■□□□□ 0.41
PTPN18-213ENST00000489215 DEFA3P59666 94 aa17.6■□□□□ 0.41
PTPN18-213ENST00000489215 RAP2BP61225 183 aa17.6■□□□□ 0.41
PTPN18-213ENST00000489215 LSM5Q9Y4Y9 91 aaKnown RBP17.6■□□□□ 0.41
PTPN18-213ENST00000489215 ZNF98A6NK75 572 aa17.59■□□□□ 0.41
PTPN18-213ENST00000489215 PRAF2O60831 178 aa17.59■□□□□ 0.41
PTPN18-213ENST00000489215 DEDDO75618 318 aa17.59■□□□□ 0.41
PTPN18-213ENST00000489215 PSMB3P49720 205 aa17.59■□□□□ 0.41
PTPN18-213ENST00000489215 RRAS2P62070 204 aaPredicted RBP17.59■□□□□ 0.41
PTPN18-213ENST00000489215 OR1B1Q8NGR6 318 aa17.59■□□□□ 0.41
PTPN18-213ENST00000489215 KNCNA6PVL3 124 aa17.58■□□□□ 0.4
PTPN18-213ENST00000489215 K7EPK0 472 aa17.58■□□□□ 0.4
PTPN18-213ENST00000489215 BCAP31P51572 246 aa17.58■□□□□ 0.4
PTPN18-213ENST00000489215 PLP1P60201 277 aa17.58■□□□□ 0.4
PTPN18-213ENST00000489215 PXDC1Q5TGL8 231 aa17.58■□□□□ 0.4
PTPN18-213ENST00000489215 OR11H2Q8NH07 326 aa17.58■□□□□ 0.4
PTPN18-213ENST00000489215 C1QTNF4Q9BXJ3 329 aa17.58■□□□□ 0.4
PTPN18-213ENST00000489215 ISLRO14498 428 aa17.57■□□□□ 0.4
PTPN18-213ENST00000489215 HYPMO75409 117 aa17.57■□□□□ 0.4
PTPN18-213ENST00000489215 GATA2P23769 480 aaPredicted RBP17.57■□□□□ 0.4
PTPN18-213ENST00000489215 SPATA31B1PQ5VZV4 182 aa17.57■□□□□ 0.4
PTPN18-213ENST00000489215 SLC25A22Q9H936 323 aa17.57■□□□□ 0.4
PTPN18-213ENST00000489215 CCNKO75909 580 aa17.56■□□□□ 0.4
PTPN18-213ENST00000489215 LINC00869P0C866 280 aa17.56■□□□□ 0.4
PTPN18-213ENST00000489215 CAV2P51636 162 aa17.56■□□□□ 0.4
PTPN18-213ENST00000489215 RAB31Q13636 194 aa17.56■□□□□ 0.4
PTPN18-213ENST00000489215 TMEM182Q6ZP80 229 aaPredicted RBP17.56■□□□□ 0.4
PTPN18-213ENST00000489215 HIGD1AQ9Y241 93 aa17.56■□□□□ 0.4
PTPN18-213ENST00000489215 AGRNO00468 2067 aa17.56■□□□□ 0.4
PTPN18-213ENST00000489215 GOSR2O14653 212 aa17.55■□□□□ 0.4
PTPN18-213ENST00000489215 ZNF546Q86UE3 836 aa17.55■□□□□ 0.4
PTPN18-213ENST00000489215 LINC00052Q96N35 136 aa17.55■□□□□ 0.4
PTPN18-213ENST00000489215 DNAH7Q8WXX0 4024 aa17.55■□□□□ 0.4
PTPN18-213ENST00000489215 INMT-MINDY4F8WBC2 141 aa17.54■□□□□ 0.4
PTPN18-213ENST00000489215 H3BMM0 161 aa17.54■□□□□ 0.4
PTPN18-213ENST00000489215 HLA-DRB4P13762 266 aa17.54■□□□□ 0.4
PTPN18-213ENST00000489215 IFITM3Q01628 133 aa17.54■□□□□ 0.4
PTPN18-213ENST00000489215 IL15RAQ13261 267 aa17.54■□□□□ 0.4
PTPN18-213ENST00000489215 NRARPQ7Z6K4 114 aa17.54■□□□□ 0.4
PTPN18-213ENST00000489215 SLC25A39Q9BZJ4 359 aaPredicted RBP17.54■□□□□ 0.4
PTPN18-213ENST00000489215 C11orf68Q9H3H3 251 aaKnown RBP17.54■□□□□ 0.4
PTPN18-213ENST00000489215 HLA-DRB4X5D2U9 266 aa17.54■□□□□ 0.4
PTPN18-213ENST00000489215 OR5G3P0C626 314 aa17.53■□□□□ 0.4
PTPN18-213ENST00000489215 RPL7P18124 248 aaKnown RBP17.53■□□□□ 0.4
PTPN18-213ENST00000489215 S100A11P31949 105 aa17.53■□□□□ 0.4
PTPN18-213ENST00000489215 S100A10P60903 97 aa17.53■□□□□ 0.4
PTPN18-213ENST00000489215 CYCSP99999 105 aaKnown RBP17.53■□□□□ 0.4
PTPN18-213ENST00000489215 SLC38A11Q08AI6 406 aa17.53■□□□□ 0.4
PTPN18-213ENST00000489215 FOXI2Q6ZQN5 318 aa17.53■□□□□ 0.4
PTPN18-213ENST00000489215 C16orf92Q96LL3 132 aa17.53■□□□□ 0.4
PTPN18-213ENST00000489215 CLUHP3Q96NS8 147 aa17.53■□□□□ 0.4
PTPN18-213ENST00000489215 SHANK2-AS3Q9BTD1 123 aa17.53■□□□□ 0.4
PTPN18-213ENST00000489215 RSG1Q9BU20 258 aa17.53■□□□□ 0.4
PTPN18-213ENST00000489215 SLC25A32Q9H2D1 315 aa17.53■□□□□ 0.4
PTPN18-213ENST00000489215 RPRMQ9NS64 109 aa17.53■□□□□ 0.4
PTPN18-213ENST00000489215 LYRM2Q9NU23 88 aaPredicted RBP17.53■□□□□ 0.4
PTPN18-213ENST00000489215 NUPR2A6NF83 97 aa17.52■□□□□ 0.4
PTPN18-213ENST00000489215 H3BRN7 92 aa17.52■□□□□ 0.4
PTPN18-213ENST00000489215 SOCS3O14543 225 aa17.52■□□□□ 0.4
PTPN18-213ENST00000489215 RLN2P04090 185 aa17.52■□□□□ 0.4
PTPN18-213ENST00000489215 HBG1P69891 147 aa17.52■□□□□ 0.4
PTPN18-213ENST00000489215 HBG2P69892 147 aa17.52■□□□□ 0.4
PTPN18-213ENST00000489215 ARL16Q0P5N6 197 aa17.52■□□□□ 0.4
PTPN18-213ENST00000489215 RAB32Q13637 225 aa17.52■□□□□ 0.4
PTPN18-213ENST00000489215 STX12Q86Y82 276 aa17.52■□□□□ 0.4
PTPN18-213ENST00000489215 MARVELD1Q9BSK0 173 aa17.52■□□□□ 0.4
PTPN18-213ENST00000489215 MFFQ9GZY8 342 aa17.52■□□□□ 0.4
PTPN18-213ENST00000489215 SAV1Q9H4B6 383 aaPredicted RBP17.52■□□□□ 0.4
PTPN18-213ENST00000489215 KMT2CQ8NEZ4 4911 aaKnown RBP17.51■□□□□ 0.39
PTPN18-213ENST00000489215 LCE6AA0A183 80 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms