RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 TMEM231Q9H6L2 316 aa7.76□□□□□ -1.17
USP11-211ENST00000489111 TMEM167BQ9NRX6 74 aa7.76□□□□□ -1.17
USP11-211ENST00000489111 RNF24Q9Y225 148 aa7.76□□□□□ -1.17
USP11-211ENST00000489111 PLXNB1O43157 2135 aa7.75□□□□□ -1.17
USP11-211ENST00000489111 LOC102723971A0A1B0GUV8 181 aa7.75□□□□□ -1.17
USP11-211ENST00000489111 KHDC1LQ5JSQ8 128 aa7.75□□□□□ -1.17
USP11-211ENST00000489111 ZNF506Q5JVG8 444 aa7.75□□□□□ -1.17
USP11-211ENST00000489111 RNF152Q8N8N0 203 aa7.75□□□□□ -1.17
USP11-211ENST00000489111 OR5B12Q96R08 314 aa7.75□□□□□ -1.17
USP11-211ENST00000489111 SHANK2-AS3Q9BTD1 123 aa7.75□□□□□ -1.17
USP11-211ENST00000489111 SCRT1Q9BWW7 348 aa7.75□□□□□ -1.17
USP11-211ENST00000489111 SLC25A2Q9BXI2 301 aa7.75□□□□□ -1.17
USP11-211ENST00000489111 SLC25A39Q9BZJ4 359 aaPredicted RBP7.75□□□□□ -1.17
USP11-211ENST00000489111 TMPRSS5Q9H3S3 457 aa7.75□□□□□ -1.17
USP11-211ENST00000489111 C16orf95Q9H693 158 aa7.75□□□□□ -1.17
USP11-211ENST00000489111 MRPL27Q9P0M9 148 aaKnown RBP7.75□□□□□ -1.17
USP11-211ENST00000489111 PEF1Q9UBV8 284 aaKnown RBP7.75□□□□□ -1.17
USP11-211ENST00000489111 RABAC1Q9UI14 185 aa7.75□□□□□ -1.17
USP11-211ENST00000489111 MXRA5Q9NR99 2828 aa7.75□□□□□ -1.17
USP11-211ENST00000489111 TRAV5A0A0B4J249 113 aa7.74□□□□□ -1.17
USP11-211ENST00000489111 H3BRN7 92 aa7.74□□□□□ -1.17
USP11-211ENST00000489111 GGCTO75223 188 aaKnown RBP7.74□□□□□ -1.17
USP11-211ENST00000489111 NDUFA7O95182 113 aa7.74□□□□□ -1.17
USP11-211ENST00000489111 TRBV12-3P01733 135 aa7.74□□□□□ -1.17
USP11-211ENST00000489111 LGALS1P09382 135 aaKnown RBP7.74□□□□□ -1.17
USP11-211ENST00000489111 OR10J4P0C629 311 aa7.74□□□□□ -1.17
USP11-211ENST00000489111 PMS2P11Q13670 270 aa7.74□□□□□ -1.17
USP11-211ENST00000489111 USF2Q15853 346 aaPredicted RBP7.74□□□□□ -1.17
USP11-211ENST00000489111 MORN5Q5VZ52 161 aa7.74□□□□□ -1.17
USP11-211ENST00000489111 TOMM20LQ6UXN7 152 aa7.74□□□□□ -1.17
USP11-211ENST00000489111 OR4F5Q8NH21 305 aa7.74□□□□□ -1.17
USP11-211ENST00000489111 MYOZ3Q8TDC0 251 aa7.74□□□□□ -1.17
USP11-211ENST00000489111 RXFP4Q8TDU9 374 aa7.74□□□□□ -1.17
USP11-211ENST00000489111 FAM167A-AS1Q96KT0 104 aa7.74□□□□□ -1.17
USP11-211ENST00000489111 UBE2E2Q96LR5 201 aa7.74□□□□□ -1.17
USP11-211ENST00000489111 METTL26Q96S19 204 aa7.74□□□□□ -1.17
USP11-211ENST00000489111 PAXXQ9BUH6 204 aa7.74□□□□□ -1.17
USP11-211ENST00000489111 C20orf24Q9BUV8 137 aa7.74□□□□□ -1.17
USP11-211ENST00000489111 SMDT1Q9H4I9 107 aa7.74□□□□□ -1.17
USP11-211ENST00000489111 VAX2Q9UIW0 290 aa7.74□□□□□ -1.17
USP11-211ENST00000489111 IGHV3OR16-8A0A075B7F1 116 aa7.73□□□□□ -1.17
USP11-211ENST00000489111 KRBOX1C9JBD0 128 aa7.73□□□□□ -1.17
USP11-211ENST00000489111 NDUFA4O00483 81 aa7.73□□□□□ -1.17
USP11-211ENST00000489111 PAGE4O60829 102 aa7.73□□□□□ -1.17
USP11-211ENST00000489111 HSPB1P04792 205 aaKnown RBP7.73□□□□□ -1.17
USP11-211ENST00000489111 CD5P06127 495 aa7.73□□□□□ -1.17
USP11-211ENST00000489111 SFTA3P0C7M3 94 aa7.73□□□□□ -1.17
USP11-211ENST00000489111 ZP3P21754 424 aa7.73□□□□□ -1.17
USP11-211ENST00000489111 UBE2G2P60604 165 aa7.73□□□□□ -1.17
USP11-211ENST00000489111 SRSF3P84103 164 aaKnown RBP7.73□□□□□ -1.17
USP11-211ENST00000489111 MEF2BQ02080 365 aaPredicted RBP7.73□□□□□ -1.17
USP11-211ENST00000489111 ICAM4Q14773 271 aa7.73□□□□□ -1.17
USP11-211ENST00000489111 CST9LP1Q5W188 147 aa7.73□□□□□ -1.17
USP11-211ENST00000489111 LEMD1Q68G75 181 aa7.73□□□□□ -1.17
USP11-211ENST00000489111 RARRES2Q99969 163 aa7.73□□□□□ -1.17
USP11-211ENST00000489111 OR51M1Q9H341 326 aa7.73□□□□□ -1.17
USP11-211ENST00000489111 ZFAND3Q9H8U3 227 aa7.73□□□□□ -1.17
USP11-211ENST00000489111 ARL2-SNX15V9GYD0 113 aa7.73□□□□□ -1.17
USP11-211ENST00000489111 MTORP42345 2549 aa7.72□□□□□ -1.17
USP11-211ENST00000489111 HIVEP1P15822 2718 aa7.72□□□□□ -1.17
USP11-211ENST00000489111 TMEM218A2RU14 115 aa7.72□□□□□ -1.17
USP11-211ENST00000489111 ZNF98A6NK75 572 aa7.72□□□□□ -1.17
USP11-211ENST00000489111 C11orf94C9JXX5 98 aa7.72□□□□□ -1.17
USP11-211ENST00000489111 PYYP10082 97 aa7.72□□□□□ -1.17
USP11-211ENST00000489111 GP9P14770 177 aa7.72□□□□□ -1.17
USP11-211ENST00000489111 NPPCP23582 126 aa7.72□□□□□ -1.17
USP11-211ENST00000489111 CEBPGP53567 150 aa7.72□□□□□ -1.17
USP11-211ENST00000489111 KIAA0141Q14154 515 aaPredicted RBP7.72□□□□□ -1.17
USP11-211ENST00000489111 RPEL1Q2QD12 228 aa7.72□□□□□ -1.17
USP11-211ENST00000489111 FAM106AQ4KMX7 169 aa7.72□□□□□ -1.17
USP11-211ENST00000489111 BPIFA4PQ86YQ2 179 aa7.72□□□□□ -1.17
USP11-211ENST00000489111 OR4F17Q8NGA8 305 aa7.72□□□□□ -1.17
USP11-211ENST00000489111 LINC01006Q8NI28 216 aa7.72□□□□□ -1.17
USP11-211ENST00000489111 OR4F4Q96R69 305 aa7.72□□□□□ -1.17
USP11-211ENST00000489111 SLC35B3Q9H1N7 401 aa7.72□□□□□ -1.17
USP11-211ENST00000489111 TMEM14CQ9P0S9 112 aa7.72□□□□□ -1.17
USP11-211ENST00000489111 ZNF320A2RRD8 509 aa7.71□□□□□ -1.18
USP11-211ENST00000489111 F8W036 122 aa7.71□□□□□ -1.18
USP11-211ENST00000489111 RPL7P18124 248 aaKnown RBP7.71□□□□□ -1.18
USP11-211ENST00000489111 OR8I2Q8N0Y5 310 aa7.71□□□□□ -1.18
USP11-211ENST00000489111 C4orf3Q8WVX3 66 aa7.71□□□□□ -1.18
USP11-211ENST00000489111 TMEM190Q8WZ59 177 aa7.71□□□□□ -1.18
USP11-211ENST00000489111 FXYD5Q96DB9 178 aa7.71□□□□□ -1.18
USP11-211ENST00000489111 ZNF503Q96F45 646 aa7.71□□□□□ -1.18
USP11-211ENST00000489111 TXNDC17Q9BRA2 123 aa7.71□□□□□ -1.18
USP11-211ENST00000489111 RNF114Q9Y508 228 aa7.71□□□□□ -1.18
USP11-211ENST00000489111 YTHDF2Q9Y5A9 579 aaKnown RBP7.71□□□□□ -1.18
USP11-211ENST00000489111 ZNF469Q96JG9 3925 aaPredicted RBP7.71□□□□□ -1.18
USP11-211ENST00000489111 SETXQ7Z333 2677 aaKnown RBP7.71□□□□□ -1.18
USP11-211ENST00000489111 FAM74A7A6NL05 159 aa7.7□□□□□ -1.18
USP11-211ENST00000489111 CYSRT1A8MQ03 144 aa7.7□□□□□ -1.18
USP11-211ENST00000489111 C9JQL5 133 aa7.7□□□□□ -1.18
USP11-211ENST00000489111 F6UZH7 168 aa7.7□□□□□ -1.18
USP11-211ENST00000489111 HAX1O00165 279 aa7.7□□□□□ -1.18
USP11-211ENST00000489111 ZNF207O43670 478 aaKnown RBP7.7□□□□□ -1.18
USP11-211ENST00000489111 PDE6DO43924 150 aa7.7□□□□□ -1.18
USP11-211ENST00000489111 SRP19P09132 144 aaKnown RBP7.7□□□□□ -1.18
USP11-211ENST00000489111 HIST1H1EP10412 219 aaKnown RBP7.7□□□□□ -1.18
USP11-211ENST00000489111 ATF4P18848 351 aaPredicted RBP7.7□□□□□ -1.18
USP11-211ENST00000489111 CDX1P47902 265 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms