RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 DEFB4AO15263 64 aa18.18■□□□□ 0.5
HMGN1-217ENST00000489072 CFDP00746 253 aaPredicted RBP18.18■□□□□ 0.5
HMGN1-217ENST00000489072 CEMP1Q6PRD7 247 aaPredicted RBP18.18■□□□□ 0.5
HMGN1-217ENST00000489072 TMEM14EPQ6UXP3 125 aa18.18■□□□□ 0.5
HMGN1-217ENST00000489072 TMEM144Q7Z5S9 345 aa18.18■□□□□ 0.5
HMGN1-217ENST00000489072 SEC22CQ9BRL7 303 aa18.18■□□□□ 0.5
HMGN1-217ENST00000489072 NUDT15Q9NV35 164 aa18.18■□□□□ 0.5
HMGN1-217ENST00000489072 SMCO3A2RU48 225 aa18.17■□□□□ 0.5
HMGN1-217ENST00000489072 NUPR2A6NF83 97 aa18.17■□□□□ 0.5
HMGN1-217ENST00000489072 SOCS3O14543 225 aa18.17■□□□□ 0.5
HMGN1-217ENST00000489072 DEFB1P60022 68 aa18.17■□□□□ 0.5
HMGN1-217ENST00000489072 TMEM41BQ5BJD5 291 aa18.17■□□□□ 0.5
HMGN1-217ENST00000489072 BPIFCQ8NFQ6 507 aa18.17■□□□□ 0.5
HMGN1-217ENST00000489072 CLEC5AQ9NY25 188 aa18.17■□□□□ 0.5
HMGN1-217ENST00000489072 H3BMM0 161 aa18.16■□□□□ 0.5
HMGN1-217ENST00000489072 MBPP02686 304 aaPredicted RBP18.16■□□□□ 0.5
HMGN1-217ENST00000489072 METTL15P1P0C7V9 234 aa18.16■□□□□ 0.5
HMGN1-217ENST00000489072 LINC00299Q6ZSB3 139 aa18.16■□□□□ 0.5
HMGN1-217ENST00000489072 OR8I2Q8N0Y5 310 aa18.16■□□□□ 0.5
HMGN1-217ENST00000489072 Q8NAQ8 132 aa18.16■□□□□ 0.5
HMGN1-217ENST00000489072 CSNK1G2-AS1Q8NCQ2 148 aa18.16■□□□□ 0.5
HMGN1-217ENST00000489072 SLC45A2Q9UMX9 530 aa18.16■□□□□ 0.5
HMGN1-217ENST00000489072 ORM2P19652 201 aa18.15■□□□□ 0.5
HMGN1-217ENST00000489072 RRAS2P62070 204 aaPredicted RBP18.15■□□□□ 0.5
HMGN1-217ENST00000489072 GDF5OSQ5U4N7 250 aa18.15■□□□□ 0.5
HMGN1-217ENST00000489072 ZNF431Q8TF32 576 aaPredicted RBP18.15■□□□□ 0.5
HMGN1-217ENST00000489072 SLC25A32Q9H2D1 315 aa18.15■□□□□ 0.5
HMGN1-217ENST00000489072 TBC1D24Q9ULP9 559 aa18.15■□□□□ 0.5
HMGN1-217ENST00000489072 ZNF98A6NK75 572 aa18.14■□□□□ 0.49
HMGN1-217ENST00000489072 HLA-DRB4P13762 266 aa18.14■□□□□ 0.49
HMGN1-217ENST00000489072 TAS2R30P59541 319 aa18.14■□□□□ 0.49
HMGN1-217ENST00000489072 NANOS2P60321 138 aaKnown RBP18.14■□□□□ 0.49
HMGN1-217ENST00000489072 DLK1P80370 383 aa18.14■□□□□ 0.49
HMGN1-217ENST00000489072 CYP2G1PQ6ZSU1 146 aa18.14■□□□□ 0.49
HMGN1-217ENST00000489072 C17orf77Q96MU5 243 aa18.14■□□□□ 0.49
HMGN1-217ENST00000489072 LINC00052Q96N35 136 aa18.14■□□□□ 0.49
HMGN1-217ENST00000489072 SLC25A22Q9H936 323 aa18.14■□□□□ 0.49
HMGN1-217ENST00000489072 HLA-DRB4X5D2U9 266 aa18.14■□□□□ 0.49
HMGN1-217ENST00000489072 X6R8D5 127 aa18.14■□□□□ 0.49
HMGN1-217ENST00000489072 C7orf66A4D0T2 115 aa18.13■□□□□ 0.49
HMGN1-217ENST00000489072 A6NHS1 94 aa18.13■□□□□ 0.49
HMGN1-217ENST00000489072 ZNF705EA8MWA4 302 aaPredicted RBP18.13■□□□□ 0.49
HMGN1-217ENST00000489072 TSC22D2O75157 780 aa18.13■□□□□ 0.49
HMGN1-217ENST00000489072 H2AFB2P0C5Z0 115 aa18.13■□□□□ 0.49
HMGN1-217ENST00000489072 PSMB3P49720 205 aa18.13■□□□□ 0.49
HMGN1-217ENST00000489072 OR1B1Q8NGR6 318 aa18.13■□□□□ 0.49
HMGN1-217ENST00000489072 PHLDA1Q8WV24 401 aaPredicted RBP18.13■□□□□ 0.49
HMGN1-217ENST00000489072 IGHV4-28A0A0C4DH34 117 aa18.12■□□□□ 0.49
HMGN1-217ENST00000489072 RBMY1A1P0DJD3 496 aaKnown RBP18.12■□□□□ 0.49
HMGN1-217ENST00000489072 RBMY1CP0DJD4 496 aa18.12■□□□□ 0.49
HMGN1-217ENST00000489072 ID1P41134 155 aa18.12■□□□□ 0.49
HMGN1-217ENST00000489072 ARL16Q0P5N6 197 aa18.12■□□□□ 0.49
HMGN1-217ENST00000489072 RBMY1FQ15415 496 aaKnown RBP18.12■□□□□ 0.49
HMGN1-217ENST00000489072 C11orf45Q8TAV5 145 aa18.12■□□□□ 0.49
HMGN1-217ENST00000489072 S100ZQ8WXG8 99 aa18.12■□□□□ 0.49
HMGN1-217ENST00000489072 TMEM147Q9BVK8 224 aa18.12■□□□□ 0.49
HMGN1-217ENST00000489072 DOK5Q9P104 306 aa18.12■□□□□ 0.49
HMGN1-217ENST00000489072 FAM25EA8MYX2 175 aa18.11■□□□□ 0.49
HMGN1-217ENST00000489072 IL5P05113 134 aa18.11■□□□□ 0.49
HMGN1-217ENST00000489072 C12orf45Q8N5I9 185 aaPredicted RBP18.11■□□□□ 0.49
HMGN1-217ENST00000489072 OR10P1Q8NGE3 313 aa18.11■□□□□ 0.49
HMGN1-217ENST00000489072 LINC00476Q8WZB0 136 aa18.11■□□□□ 0.49
HMGN1-217ENST00000489072 SAV1Q9H4B6 383 aaPredicted RBP18.11■□□□□ 0.49
HMGN1-217ENST00000489072 FAM240BA0A1B0GVZ2 78 aa18.1■□□□□ 0.49
HMGN1-217ENST00000489072 FNDC10F2Z333 226 aa18.1■□□□□ 0.49
HMGN1-217ENST00000489072 ISLRO14498 428 aa18.1■□□□□ 0.49
HMGN1-217ENST00000489072 GALR1P47211 349 aa18.1■□□□□ 0.49
HMGN1-217ENST00000489072 ZNF846Q147U1 533 aa18.1■□□□□ 0.49
HMGN1-217ENST00000489072 RSG1Q9BU20 258 aa18.1■□□□□ 0.49
HMGN1-217ENST00000489072 SCRT1Q9BWW7 348 aa18.1■□□□□ 0.49
HMGN1-217ENST00000489072 NPVFQ9HCQ7 196 aa18.1■□□□□ 0.49
HMGN1-217ENST00000489072 XCL2Q9UBD3 114 aa18.1■□□□□ 0.49
HMGN1-217ENST00000489072 H3BRN7 92 aa18.09■□□□□ 0.49
HMGN1-217ENST00000489072 IGKV3-20P01619 116 aa18.09■□□□□ 0.49
HMGN1-217ENST00000489072 MIFP14174 115 aa18.09■□□□□ 0.49
HMGN1-217ENST00000489072 NUTF2P61970 127 aaKnown RBP18.09■□□□□ 0.49
HMGN1-217ENST00000489072 ASAH1Q13510 395 aa18.09■□□□□ 0.49
HMGN1-217ENST00000489072 FOXI2Q6ZQN5 318 aa18.09■□□□□ 0.49
HMGN1-217ENST00000489072 C20orf173Q96LM9 149 aa18.09■□□□□ 0.49
HMGN1-217ENST00000489072 SLC25A39Q9BZJ4 359 aaPredicted RBP18.09■□□□□ 0.49
HMGN1-217ENST00000489072 KLK5Q9Y337 293 aaPredicted RBP18.09■□□□□ 0.49
HMGN1-217ENST00000489072 C5orf51A6NDU8 294 aa18.08■□□□□ 0.48
HMGN1-217ENST00000489072 K7EPK0 472 aa18.08■□□□□ 0.48
HMGN1-217ENST00000489072 LINC00869P0C866 280 aa18.08■□□□□ 0.48
HMGN1-217ENST00000489072 PLP1P60201 277 aa18.08■□□□□ 0.48
HMGN1-217ENST00000489072 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.08■□□□□ 0.48
HMGN1-217ENST00000489072 MFFQ9GZY8 342 aa18.08■□□□□ 0.48
HMGN1-217ENST00000489072 C11orf1Q9H5F2 150 aa18.08■□□□□ 0.48
HMGN1-217ENST00000489072 MGAT4CQ9UBM8 478 aa18.08■□□□□ 0.48
HMGN1-217ENST00000489072 LSM5Q9Y4Y9 91 aaKnown RBP18.08■□□□□ 0.48
HMGN1-217ENST00000489072 F6UB75 175 aa18.07■□□□□ 0.48
HMGN1-217ENST00000489072 MEOX2P50222 304 aa18.07■□□□□ 0.48
HMGN1-217ENST00000489072 SELENOTP62341 195 aa18.07■□□□□ 0.48
HMGN1-217ENST00000489072 SLC38A11Q08AI6 406 aa18.07■□□□□ 0.48
HMGN1-217ENST00000489072 MZT2BQ6NZ67 158 aa18.07■□□□□ 0.48
HMGN1-217ENST00000489072 C16orf92Q96LL3 132 aa18.07■□□□□ 0.48
HMGN1-217ENST00000489072 SHANK2-AS3Q9BTD1 123 aa18.07■□□□□ 0.48
HMGN1-217ENST00000489072 C1QTNF4Q9BXJ3 329 aa18.07■□□□□ 0.48
HMGN1-217ENST00000489072 HIGD1AQ9Y241 93 aa18.07■□□□□ 0.48
HMGN1-217ENST00000489072 ELOA3CA0A087WX78 387 aaPredicted RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms