RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 IGKV4-1P06312 121 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 IGLC2P0DOY2 106 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 IGLC3P0DOY3 106 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 CTSEP14091 401 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 RPS4Y1P22090 263 aaKnown RBP2.1□□□□□ -2.07
SSR1-209ENST00000488834 ATP6V0CP27449 155 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 GABRA3P34903 492 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 GNG4P50150 75 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 FOXA1P55317 472 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 H2BFSP57053 126 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 C1QTNF8P60827 252 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 SNRPGP62308 76 aaKnown RBP2.1□□□□□ -2.07
SSR1-209ENST00000488834 RPL23P62829 140 aaKnown RBP2.1□□□□□ -2.07
SSR1-209ENST00000488834 RPS25P62851 125 aaKnown RBP2.1□□□□□ -2.07
SSR1-209ENST00000488834 PSG4Q00888 419 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 ADIGQ0VDE8 80 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 TMEM267Q0VDI3 215 aaPredicted RBP2.1□□□□□ -2.07
SSR1-209ENST00000488834 FOXF1Q12946 379 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 Q499Y3 187 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 KRTAP13-2Q52LG2 175 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 SPANXN3Q5MJ09 141 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 TMEM78Q5T7P6 136 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 AMMECR1LQ6DCA0 310 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 AGTRAPQ6RW13 159 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 OPN5Q6U736 354 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 TOMM20LQ6UXN7 152 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 FOXI2Q6ZQN5 318 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 GTF2H5Q6ZYL4 71 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 FA2HQ7L5A8 372 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 COMMD6Q7Z4G1 85 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 LINC00337Q8N6G1 96 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 OR4B1Q8NGF8 309 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 OR1L8Q8NGR8 309 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 OR2T27Q8NH04 317 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 FXYD5Q96DB9 178 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 SLAMF6Q96DU3 332 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 DNAJC30Q96LL9 226 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 LINC01587Q99440 93 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 VAMP8Q9BV40 100 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 TMEM126AQ9H061 195 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 GTSF1LQ9H1H1 148 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 SLC35B3Q9H1N7 401 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 TMEM133Q9H2Q1 129 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 RBM12B-AS1Q9P1G2 102 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 BOKQ9UMX3 212 aaPredicted RBP2.1□□□□□ -2.07
SSR1-209ENST00000488834 SLIT2O94813 1529 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 TRPM6Q9BX84 2022 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 DOCK9Q9BZ29 2069 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 ANAPC1Q9H1A4 1944 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 RICTORQ6R327 1708 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 A0A087WUU8 490 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 LOC102724200A0A096LPH7 203 aaPredicted RBP2.09□□□□□ -2.07
SSR1-209ENST00000488834 BORCS7-ASMTA0A0B4J1R7 106 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 LOC389332A0A1B0GUA5 103 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 IRGMA1A4Y4 181 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 PGPA6NDG6 321 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 TLCD2A6NGC4 264 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 ZNF860A6NHJ4 632 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 ZNF850A8MQ14 1090 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.09□□□□□ -2.07
SSR1-209ENST00000488834 J3QR89 54 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 K7EPK0 472 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 K7EQS6 105 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 M0R1X1 148 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 FFAR1O14842 300 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 ZNF207O43670 478 aaKnown RBP2.09□□□□□ -2.07
SSR1-209ENST00000488834 OR7C1O76099 320 aaPredicted RBP2.09□□□□□ -2.07
SSR1-209ENST00000488834 CA2P00918 260 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 ATP5G1P05496 136 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 CSRP1P21291 193 aaKnown RBP2.09□□□□□ -2.07
SSR1-209ENST00000488834 CXCL12P48061 93 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 GFERP55789 205 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 TCTAP57738 103 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 YPEL3P61236 119 aaPredicted RBP2.09□□□□□ -2.07
SSR1-209ENST00000488834 RPS28P62857 69 aaKnown RBP2.09□□□□□ -2.07
SSR1-209ENST00000488834 GRB2P62993 217 aaKnown RBP2.09□□□□□ -2.07
SSR1-209ENST00000488834 MEF2BQ02080 365 aaPredicted RBP2.09□□□□□ -2.07
SSR1-209ENST00000488834 HIST1H1AQ02539 215 aaPredicted RBP2.09□□□□□ -2.07
SSR1-209ENST00000488834 ACOT6Q3I5F7 207 aaPredicted RBP2.09□□□□□ -2.07
SSR1-209ENST00000488834 CENPWQ5EE01 88 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 Q6ZSR6 202 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 C1orf174Q8IYL3 243 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 TMEM256Q8N2U0 113 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 DEFB125Q8N687 156 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 ZNF676Q8N7Q3 588 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 TSTD1Q8NFU3 115 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 OR51A2Q8NGJ7 313 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 OR10G6Q8NH81 332 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 LINC01560Q8TB33 94 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 SMIM4Q8WVI0 70 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 NEURL3Q96EH8 262 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 TVP23CQ96ET8 276 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 PRSS27Q9BQR3 290 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 DERL1Q9BUN8 251 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 EFCAB11Q9BUY7 163 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 MRPL20Q9BYC9 149 aaKnown RBP2.09□□□□□ -2.07
SSR1-209ENST00000488834 SAMD10Q9BYL1 202 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 TCEAL2Q9H3H9 227 aaPredicted RBP2.09□□□□□ -2.07
SSR1-209ENST00000488834 NPVFQ9HCQ7 196 aa2.09□□□□□ -2.07
SSR1-209ENST00000488834 ENY2Q9NPA8 101 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms