RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 TFPI2P48307 235 aa10.1□□□□□ -0.79
CLIC4-202ENST00000488683 CIARTQ8N365 385 aaPredicted RBP10.1□□□□□ -0.79
CLIC4-202ENST00000488683 BEND2Q8NDZ0 799 aa10.1□□□□□ -0.79
CLIC4-202ENST00000488683 C2orf88Q9BSF0 95 aa10.1□□□□□ -0.79
CLIC4-202ENST00000488683 CUBNO60494 3623 aa10.09□□□□□ -0.79
CLIC4-202ENST00000488683 TCAPO15273 167 aa10.09□□□□□ -0.79
CLIC4-202ENST00000488683 AMY1AP04745 511 aa10.09□□□□□ -0.79
CLIC4-202ENST00000488683 APOBEC3AP31941 199 aaPredicted RBP10.09□□□□□ -0.79
CLIC4-202ENST00000488683 CASP6P55212 293 aa10.09□□□□□ -0.79
CLIC4-202ENST00000488683 PAFAH1B2P68402 229 aa10.09□□□□□ -0.79
CLIC4-202ENST00000488683 Q8N976 141 aa10.09□□□□□ -0.79
CLIC4-202ENST00000488683 MBD6Q96DN6 1003 aa10.09□□□□□ -0.79
CLIC4-202ENST00000488683 SIGLEC9Q9Y336 463 aa10.09□□□□□ -0.79
CLIC4-202ENST00000488683 VSTM5A8MXK1 200 aa10.09□□□□□ -0.79
CLIC4-202ENST00000488683 NBEAP1P0C6P0 100 aa10.09□□□□□ -0.79
CLIC4-202ENST00000488683 PSG1P11464 419 aa10.09□□□□□ -0.79
CLIC4-202ENST00000488683 LGALS7P47929 136 aa10.09□□□□□ -0.79
CLIC4-202ENST00000488683 ZNF138P52744 262 aa10.09□□□□□ -0.79
CLIC4-202ENST00000488683 UBE2G1P62253 170 aa10.09□□□□□ -0.79
CLIC4-202ENST00000488683 RPL19P84098 196 aaKnown RBP10.09□□□□□ -0.79
CLIC4-202ENST00000488683 TSKUQ8WUA8 353 aa10.09□□□□□ -0.79
CLIC4-202ENST00000488683 PGLYRP4Q96LB8 373 aa10.09□□□□□ -0.79
CLIC4-202ENST00000488683 C7orf69Q9H7B7 122 aa10.09□□□□□ -0.79
CLIC4-202ENST00000488683 IGHV3-35A0A0C4DH35 117 aa10.08□□□□□ -0.8
CLIC4-202ENST00000488683 DIRC3C9JPN6 131 aa10.08□□□□□ -0.8
CLIC4-202ENST00000488683 PVRIGQ6DKI7 326 aa10.08□□□□□ -0.8
CLIC4-202ENST00000488683 ZNF331Q9NQX6 463 aaPredicted RBP10.08□□□□□ -0.8
CLIC4-202ENST00000488683 EPDR1Q9UM22 224 aa10.08□□□□□ -0.8
CLIC4-202ENST00000488683 PPIAL4CA0A0B4J2A2 164 aa10.08□□□□□ -0.8
CLIC4-202ENST00000488683 IZUMO1RA6ND01 250 aa10.08□□□□□ -0.8
CLIC4-202ENST00000488683 TEX22C9J3V5 150 aa10.08□□□□□ -0.8
CLIC4-202ENST00000488683 BUB1B-PAK6H3BSN5 160 aa10.08□□□□□ -0.8
CLIC4-202ENST00000488683 PPIAL4GP0DN37 164 aa10.08□□□□□ -0.8
CLIC4-202ENST00000488683 BRS3P32247 399 aa10.08□□□□□ -0.8
CLIC4-202ENST00000488683 WDR73Q6P4I2 378 aa10.08□□□□□ -0.8
CLIC4-202ENST00000488683 PPP1R27Q86WC6 154 aa10.08□□□□□ -0.8
CLIC4-202ENST00000488683 NIT1Q86X76 327 aa10.08□□□□□ -0.8
CLIC4-202ENST00000488683 MUC15Q8N387 334 aa10.08□□□□□ -0.8
CLIC4-202ENST00000488683 TEX45Q8NA69 505 aa10.08□□□□□ -0.8
CLIC4-202ENST00000488683 TIMM23O14925 209 aa10.07□□□□□ -0.8
CLIC4-202ENST00000488683 MT-ND6P03923 174 aa10.07□□□□□ -0.8
CLIC4-202ENST00000488683 CD3EP07766 207 aa10.07□□□□□ -0.8
CLIC4-202ENST00000488683 C3orf79P0CE67 100 aa10.07□□□□□ -0.8
CLIC4-202ENST00000488683 RNASEKQ6P5S7 137 aaKnown RBP10.07□□□□□ -0.8
CLIC4-202ENST00000488683 C18orf32Q8TCD1 76 aa10.07□□□□□ -0.8
CLIC4-202ENST00000488683 VAMP8Q9BV40 100 aa10.07□□□□□ -0.8
CLIC4-202ENST00000488683 Q9H3A6 140 aa10.07□□□□□ -0.8
CLIC4-202ENST00000488683 NGBQ9NPG2 151 aa10.07□□□□□ -0.8
CLIC4-202ENST00000488683 CLEC5AQ9NY25 188 aa10.07□□□□□ -0.8
CLIC4-202ENST00000488683 MUC21A0A0G2JKD1 596 aa10.07□□□□□ -0.8
CLIC4-202ENST00000488683 MUC21A0A140T8X8 626 aa10.07□□□□□ -0.8
CLIC4-202ENST00000488683 CNIH1O95406 144 aa10.07□□□□□ -0.8
CLIC4-202ENST00000488683 ZNF124Q15973 351 aa10.07□□□□□ -0.8
CLIC4-202ENST00000488683 MUC21Q5SSG8 566 aa10.07□□□□□ -0.8
CLIC4-202ENST00000488683 SPATA12Q7Z6I5 190 aa10.07□□□□□ -0.8
CLIC4-202ENST00000488683 TMEM116Q8NCL8 245 aa10.07□□□□□ -0.8
CLIC4-202ENST00000488683 GTSF1Q8WW33 167 aa10.07□□□□□ -0.8
CLIC4-202ENST00000488683 SRSF12Q8WXF0 261 aaKnown RBP10.07□□□□□ -0.8
CLIC4-202ENST00000488683 RPEQ96AT9 228 aa10.07□□□□□ -0.8
CLIC4-202ENST00000488683 B9A039 149 aa10.06□□□□□ -0.8
CLIC4-202ENST00000488683 GP9P14770 177 aa10.06□□□□□ -0.8
CLIC4-202ENST00000488683 TEX43Q6ZNM6 134 aa10.06□□□□□ -0.8
CLIC4-202ENST00000488683 LINC00173Q6ZV60 143 aa10.06□□□□□ -0.8
CLIC4-202ENST00000488683 Q6ZVH6 145 aa10.06□□□□□ -0.8
CLIC4-202ENST00000488683 PRNTQ86SH4 94 aa10.06□□□□□ -0.8
CLIC4-202ENST00000488683 PERPQ96FX8 193 aa10.06□□□□□ -0.8
CLIC4-202ENST00000488683 KCNS1Q96KK3 526 aa10.06□□□□□ -0.8
CLIC4-202ENST00000488683 TRGV9Q99603 122 aa10.06□□□□□ -0.8
CLIC4-202ENST00000488683 HIVEP3Q5T1R4 2406 aa10.06□□□□□ -0.8
CLIC4-202ENST00000488683 CCL21O00585 134 aa10.06□□□□□ -0.8
CLIC4-202ENST00000488683 NUTF2P61970 127 aaKnown RBP10.06□□□□□ -0.8
CLIC4-202ENST00000488683 MMDQ15546 238 aa10.06□□□□□ -0.8
CLIC4-202ENST00000488683 GOLT1AQ6ZVE7 132 aa10.06□□□□□ -0.8
CLIC4-202ENST00000488683 FAM231DQ6ZW35 169 aa10.06□□□□□ -0.8
CLIC4-202ENST00000488683 CLEC7AQ9BXN2 247 aa10.06□□□□□ -0.8
CLIC4-202ENST00000488683 ZNF586Q9NXT0 402 aa10.06□□□□□ -0.8
CLIC4-202ENST00000488683 H0Y8G0 127 aa10.06□□□□□ -0.8
CLIC4-202ENST00000488683 NDUFS7O75251 213 aa10.06□□□□□ -0.8
CLIC4-202ENST00000488683 HYPMO75409 117 aa10.06□□□□□ -0.8
CLIC4-202ENST00000488683 HLA-DQA1P01909 254 aa10.06□□□□□ -0.8
CLIC4-202ENST00000488683 HES1Q14469 280 aa10.06□□□□□ -0.8
CLIC4-202ENST00000488683 TMEM183BQ1AE95 376 aa10.06□□□□□ -0.8
CLIC4-202ENST00000488683 ZNF672Q499Z4 452 aaPredicted RBP10.06□□□□□ -0.8
CLIC4-202ENST00000488683 OR10J3Q5JRS4 329 aa10.06□□□□□ -0.8
CLIC4-202ENST00000488683 IGFL4Q6B9Z1 124 aa10.06□□□□□ -0.8
CLIC4-202ENST00000488683 TPPP3Q9BW30 176 aa10.06□□□□□ -0.8
CLIC4-202ENST00000488683 K7ENP7 123 aa10.05□□□□□ -0.8
CLIC4-202ENST00000488683 ZNF324O75467 553 aaPredicted RBP10.05□□□□□ -0.8
CLIC4-202ENST00000488683 ETFRF1Q6IPR1 90 aa10.05□□□□□ -0.8
CLIC4-202ENST00000488683 SSX8Q7RTT4 187 aa10.05□□□□□ -0.8
CLIC4-202ENST00000488683 VKORC1Q9BQB6 163 aa10.05□□□□□ -0.8
CLIC4-202ENST00000488683 F11RQ9Y624 299 aaKnown RBP10.05□□□□□ -0.8
CLIC4-202ENST00000488683 M0R3E3 92 aa10.05□□□□□ -0.8
CLIC4-202ENST00000488683 PRRX1P54821 245 aa10.05□□□□□ -0.8
CLIC4-202ENST00000488683 SPATA45Q537H7 98 aa10.05□□□□□ -0.8
CLIC4-202ENST00000488683 Q56UQ5 140 aa10.05□□□□□ -0.8
CLIC4-202ENST00000488683 GRAMD2BQ96HH9 432 aa10.05□□□□□ -0.8
CLIC4-202ENST00000488683 M0R143 59 aa10.04□□□□□ -0.8
CLIC4-202ENST00000488683 ZNF25P17030 456 aaPredicted RBP10.04□□□□□ -0.8
CLIC4-202ENST00000488683 TNFRSF14Q92956 283 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms