RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 PAX9P55771 341 aa12.93□□□□□ -0.34
ITGB1-215ENST00000488494 TMEM41BQ5BJD5 291 aa12.93□□□□□ -0.34
ITGB1-215ENST00000488494 OR8I2Q8N0Y5 310 aa12.93□□□□□ -0.34
ITGB1-215ENST00000488494 SMIM8Q96KF7 97 aa12.93□□□□□ -0.34
ITGB1-215ENST00000488494 SEC22CQ9BRL7 303 aa12.93□□□□□ -0.34
ITGB1-215ENST00000488494 CLEC5AQ9NY25 188 aa12.93□□□□□ -0.34
ITGB1-215ENST00000488494 SOCS3O14543 225 aa12.92□□□□□ -0.34
ITGB1-215ENST00000488494 METTL15P1P0C7V9 234 aa12.92□□□□□ -0.34
ITGB1-215ENST00000488494 ORM2P19652 201 aa12.92□□□□□ -0.34
ITGB1-215ENST00000488494 PSMB3P49720 205 aa12.92□□□□□ -0.34
ITGB1-215ENST00000488494 RRAS2P62070 204 aaPredicted RBP12.92□□□□□ -0.34
ITGB1-215ENST00000488494 CEMP1Q6PRD7 247 aaPredicted RBP12.92□□□□□ -0.34
ITGB1-215ENST00000488494 GSG1LQ6UXU4 331 aa12.92□□□□□ -0.34
ITGB1-215ENST00000488494 TMEM182Q6ZP80 229 aaPredicted RBP12.92□□□□□ -0.34
ITGB1-215ENST00000488494 TMEM144Q7Z5S9 345 aa12.92□□□□□ -0.34
ITGB1-215ENST00000488494 SLC25A32Q9H2D1 315 aa12.92□□□□□ -0.34
ITGB1-215ENST00000488494 SLC25A22Q9H936 323 aa12.92□□□□□ -0.34
ITGB1-215ENST00000488494 PMS2P5A8MQ11 134 aa12.91□□□□□ -0.34
ITGB1-215ENST00000488494 FAM25EA8MYX2 175 aa12.91□□□□□ -0.34
ITGB1-215ENST00000488494 H3BMM0 161 aa12.91□□□□□ -0.34
ITGB1-215ENST00000488494 MBPP02686 304 aaPredicted RBP12.91□□□□□ -0.34
ITGB1-215ENST00000488494 HLA-DRB4P13762 266 aa12.91□□□□□ -0.34
ITGB1-215ENST00000488494 DEFB1P60022 68 aa12.91□□□□□ -0.34
ITGB1-215ENST00000488494 ZNF846Q147U1 533 aa12.91□□□□□ -0.34
ITGB1-215ENST00000488494 TMEM14EPQ6UXP3 125 aa12.91□□□□□ -0.34
ITGB1-215ENST00000488494 Q8NAQ8 132 aa12.91□□□□□ -0.34
ITGB1-215ENST00000488494 OR1B1Q8NGR6 318 aa12.91□□□□□ -0.34
ITGB1-215ENST00000488494 ZNF431Q8TF32 576 aaPredicted RBP12.91□□□□□ -0.34
ITGB1-215ENST00000488494 LINC00052Q96N35 136 aa12.91□□□□□ -0.34
ITGB1-215ENST00000488494 TMEM147Q9BVK8 224 aa12.91□□□□□ -0.34
ITGB1-215ENST00000488494 DOK5Q9P104 306 aa12.91□□□□□ -0.34
ITGB1-215ENST00000488494 SLC45A2Q9UMX9 530 aa12.91□□□□□ -0.34
ITGB1-215ENST00000488494 HLA-DRB4X5D2U9 266 aa12.91□□□□□ -0.34
ITGB1-215ENST00000488494 AGRNO00468 2067 aa12.91□□□□□ -0.34
ITGB1-215ENST00000488494 TSC22D2O75157 780 aa12.9□□□□□ -0.34
ITGB1-215ENST00000488494 ID1P41134 155 aa12.9□□□□□ -0.34
ITGB1-215ENST00000488494 TAS2R30P59541 319 aa12.9□□□□□ -0.34
ITGB1-215ENST00000488494 NANOS2P60321 138 aaKnown RBP12.9□□□□□ -0.34
ITGB1-215ENST00000488494 DLK1P80370 383 aa12.9□□□□□ -0.34
ITGB1-215ENST00000488494 LINC00299Q6ZSB3 139 aa12.9□□□□□ -0.34
ITGB1-215ENST00000488494 CYP2G1PQ6ZSU1 146 aa12.9□□□□□ -0.34
ITGB1-215ENST00000488494 C11orf45Q8TAV5 145 aa12.9□□□□□ -0.34
ITGB1-215ENST00000488494 PHLDA1Q8WV24 401 aaPredicted RBP12.9□□□□□ -0.34
ITGB1-215ENST00000488494 S100ZQ8WXG8 99 aa12.9□□□□□ -0.34
ITGB1-215ENST00000488494 TBC1D24Q9ULP9 559 aa12.9□□□□□ -0.34
ITGB1-215ENST00000488494 IGHV4-28A0A0C4DH34 117 aa12.89□□□□□ -0.35
ITGB1-215ENST00000488494 ZNF98A6NK75 572 aa12.89□□□□□ -0.35
ITGB1-215ENST00000488494 IL5P05113 134 aa12.89□□□□□ -0.35
ITGB1-215ENST00000488494 H2AFB2P0C5Z0 115 aa12.89□□□□□ -0.35
ITGB1-215ENST00000488494 GALR1P47211 349 aa12.89□□□□□ -0.35
ITGB1-215ENST00000488494 NUTF2P61970 127 aaKnown RBP12.89□□□□□ -0.35
ITGB1-215ENST00000488494 GDF5OSQ5U4N7 250 aa12.89□□□□□ -0.35
ITGB1-215ENST00000488494 OR10P1Q8NGE3 313 aa12.89□□□□□ -0.35
ITGB1-215ENST00000488494 LINC00476Q8WZB0 136 aa12.89□□□□□ -0.35
ITGB1-215ENST00000488494 SCRT1Q9BWW7 348 aa12.89□□□□□ -0.35
ITGB1-215ENST00000488494 MFFQ9GZY8 342 aa12.89□□□□□ -0.35
ITGB1-215ENST00000488494 MGAT4CQ9UBM8 478 aa12.89□□□□□ -0.35
ITGB1-215ENST00000488494 KLK5Q9Y337 293 aaPredicted RBP12.89□□□□□ -0.35
ITGB1-215ENST00000488494 FAM240BA0A1B0GVZ2 78 aa12.88□□□□□ -0.35
ITGB1-215ENST00000488494 C7orf66A4D0T2 115 aa12.88□□□□□ -0.35
ITGB1-215ENST00000488494 ZNF705EA8MWA4 302 aaPredicted RBP12.88□□□□□ -0.35
ITGB1-215ENST00000488494 ISLRO14498 428 aa12.88□□□□□ -0.35
ITGB1-215ENST00000488494 IGKV3-20P01619 116 aa12.88□□□□□ -0.35
ITGB1-215ENST00000488494 LINC00869P0C866 280 aa12.88□□□□□ -0.35
ITGB1-215ENST00000488494 MZT2BQ6NZ67 158 aa12.88□□□□□ -0.35
ITGB1-215ENST00000488494 FOXI2Q6ZQN5 318 aa12.88□□□□□ -0.35
ITGB1-215ENST00000488494 CSNK1G2-AS1Q8NCQ2 148 aa12.88□□□□□ -0.35
ITGB1-215ENST00000488494 XCL2Q9UBD3 114 aa12.88□□□□□ -0.35
ITGB1-215ENST00000488494 LSM5Q9Y4Y9 91 aaKnown RBP12.88□□□□□ -0.35
ITGB1-215ENST00000488494 X6R8D5 127 aa12.88□□□□□ -0.35
ITGB1-215ENST00000488494 C5orf51A6NDU8 294 aa12.87□□□□□ -0.35
ITGB1-215ENST00000488494 H3BRN7 92 aa12.87□□□□□ -0.35
ITGB1-215ENST00000488494 L7N2F9 121 aa12.87□□□□□ -0.35
ITGB1-215ENST00000488494 RBMY1A1P0DJD3 496 aaKnown RBP12.87□□□□□ -0.35
ITGB1-215ENST00000488494 RBMY1CP0DJD4 496 aa12.87□□□□□ -0.35
ITGB1-215ENST00000488494 MIFP14174 115 aa12.87□□□□□ -0.35
ITGB1-215ENST00000488494 S100A7P31151 101 aa12.87□□□□□ -0.35
ITGB1-215ENST00000488494 MEOX2P50222 304 aa12.87□□□□□ -0.35
ITGB1-215ENST00000488494 VAMP2P63027 116 aa12.87□□□□□ -0.35
ITGB1-215ENST00000488494 SLC38A11Q08AI6 406 aa12.87□□□□□ -0.35
ITGB1-215ENST00000488494 ASAH1Q13510 395 aa12.87□□□□□ -0.35
ITGB1-215ENST00000488494 RBMY1FQ15415 496 aaKnown RBP12.87□□□□□ -0.35
ITGB1-215ENST00000488494 SAMD13Q5VXD3 122 aa12.87□□□□□ -0.35
ITGB1-215ENST00000488494 C12orf45Q8N5I9 185 aaPredicted RBP12.87□□□□□ -0.35
ITGB1-215ENST00000488494 C1QTNF4Q9BXJ3 329 aa12.87□□□□□ -0.35
ITGB1-215ENST00000488494 SAV1Q9H4B6 383 aaPredicted RBP12.87□□□□□ -0.35
ITGB1-215ENST00000488494 HIGD1AQ9Y241 93 aa12.87□□□□□ -0.35
ITGB1-215ENST00000488494 FNDC10F2Z333 226 aa12.86□□□□□ -0.35
ITGB1-215ENST00000488494 K7EPK0 472 aa12.86□□□□□ -0.35
ITGB1-215ENST00000488494 RAP2BP61225 183 aa12.86□□□□□ -0.35
ITGB1-215ENST00000488494 SELENOTP62341 195 aa12.86□□□□□ -0.35
ITGB1-215ENST00000488494 ARL16Q0P5N6 197 aa12.86□□□□□ -0.35
ITGB1-215ENST00000488494 C16orf92Q96LL3 132 aa12.86□□□□□ -0.35
ITGB1-215ENST00000488494 C20orf173Q96LM9 149 aa12.86□□□□□ -0.35
ITGB1-215ENST00000488494 C17orf77Q96MU5 243 aa12.86□□□□□ -0.35
ITGB1-215ENST00000488494 GPR82Q96P67 336 aa12.86□□□□□ -0.35
ITGB1-215ENST00000488494 SHANK2-AS3Q9BTD1 123 aa12.86□□□□□ -0.35
ITGB1-215ENST00000488494 RSG1Q9BU20 258 aa12.86□□□□□ -0.35
ITGB1-215ENST00000488494 SLC25A39Q9BZJ4 359 aaPredicted RBP12.86□□□□□ -0.35
ITGB1-215ENST00000488494 EPPK1P58107 5090 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms