RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 TOR2AQ5JU69 321 aa9.35□□□□□ -0.91
HLA-DOB-209ENST00000488325 FAM209BQ5JX69 171 aa9.35□□□□□ -0.91
HLA-DOB-209ENST00000488325 DMRTA1Q5VZB9 504 aa9.35□□□□□ -0.91
HLA-DOB-209ENST00000488325 C10orf113Q5VZT2 155 aa9.35□□□□□ -0.91
HLA-DOB-209ENST00000488325 Q6ZS46 218 aa9.35□□□□□ -0.91
HLA-DOB-209ENST00000488325 SSX7Q7RTT5 188 aa9.35□□□□□ -0.91
HLA-DOB-209ENST00000488325 Q8WTZ3 238 aa9.35□□□□□ -0.91
HLA-DOB-209ENST00000488325 NOL4LQ96MY1 436 aaPredicted RBP9.35□□□□□ -0.91
HLA-DOB-209ENST00000488325 EIF5A2Q9GZV4 153 aaKnown RBP9.35□□□□□ -0.91
HLA-DOB-209ENST00000488325 MANBALQ9NQG1 85 aa9.35□□□□□ -0.91
HLA-DOB-209ENST00000488325 TECRQ9NZ01 308 aaKnown RBP9.35□□□□□ -0.91
HLA-DOB-209ENST00000488325 TENM2Q9NT68 2774 aa9.34□□□□□ -0.91
HLA-DOB-209ENST00000488325 RBFOX3A6NFN3 312 aa9.34□□□□□ -0.91
HLA-DOB-209ENST00000488325 KRBOX1C9JBD0 128 aa9.34□□□□□ -0.91
HLA-DOB-209ENST00000488325 IGLV1-40P01703 118 aa9.34□□□□□ -0.91
HLA-DOB-209ENST00000488325 C8orf88P0DMB2 117 aa9.34□□□□□ -0.91
HLA-DOB-209ENST00000488325 PSG1P11464 419 aa9.34□□□□□ -0.91
HLA-DOB-209ENST00000488325 ORM2P19652 201 aa9.34□□□□□ -0.91
HLA-DOB-209ENST00000488325 LYZP61626 148 aa9.34□□□□□ -0.91
HLA-DOB-209ENST00000488325 PQLC2Q6ZP29 291 aa9.34□□□□□ -0.91
HLA-DOB-209ENST00000488325 IQCF2Q8IXL9 164 aa9.34□□□□□ -0.91
HLA-DOB-209ENST00000488325 Q8N2B8 174 aa9.34□□□□□ -0.91
HLA-DOB-209ENST00000488325 OR1B1Q8NGR6 318 aa9.34□□□□□ -0.91
HLA-DOB-209ENST00000488325 DOK5Q9P104 306 aa9.34□□□□□ -0.91
HLA-DOB-209ENST00000488325 GNG13Q9P2W3 67 aa9.34□□□□□ -0.91
HLA-DOB-209ENST00000488325 HIGD1AQ9Y241 93 aa9.34□□□□□ -0.91
HLA-DOB-209ENST00000488325 S4R3C0 116 aa9.34□□□□□ -0.91
HLA-DOB-209ENST00000488325 NOTCH3Q9UM47 2321 aa9.33□□□□□ -0.92
HLA-DOB-209ENST00000488325 PSMB11A5LHX3 300 aa9.33□□□□□ -0.92
HLA-DOB-209ENST00000488325 ANKRD34BA5PLL1 514 aa9.33□□□□□ -0.92
HLA-DOB-209ENST00000488325 OR2T8A6NH00 312 aa9.33□□□□□ -0.92
HLA-DOB-209ENST00000488325 F8W735 103 aaPredicted RBP9.33□□□□□ -0.92
HLA-DOB-209ENST00000488325 HMGB3O15347 200 aaKnown RBP9.33□□□□□ -0.92
HLA-DOB-209ENST00000488325 NDUFA7O95182 113 aa9.33□□□□□ -0.92
HLA-DOB-209ENST00000488325 IGHG4P01861 327 aa9.33□□□□□ -0.92
HLA-DOB-209ENST00000488325 CRYBA1P05813 215 aa9.33□□□□□ -0.92
HLA-DOB-209ENST00000488325 ELANEP08246 267 aa9.33□□□□□ -0.92
HLA-DOB-209ENST00000488325 GPR183P32249 361 aa9.33□□□□□ -0.92
HLA-DOB-209ENST00000488325 CCL20P78556 96 aa9.33□□□□□ -0.92
HLA-DOB-209ENST00000488325 ZNF506Q5JVG8 444 aa9.33□□□□□ -0.92
HLA-DOB-209ENST00000488325 ZNF600Q6ZNG1 722 aa9.33□□□□□ -0.92
HLA-DOB-209ENST00000488325 MIR17HGQ75NE6 70 aa9.33□□□□□ -0.92
HLA-DOB-209ENST00000488325 STXBP6Q8NFX7 210 aa9.33□□□□□ -0.92
HLA-DOB-209ENST00000488325 TMEM37Q8WXS4 190 aa9.33□□□□□ -0.92
HLA-DOB-209ENST00000488325 NARS2Q96I59 477 aaKnown RBP9.33□□□□□ -0.92
HLA-DOB-209ENST00000488325 AURKAIP1Q9NWT8 199 aaPredicted RBP9.33□□□□□ -0.92
HLA-DOB-209ENST00000488325 RNF24Q9Y225 148 aa9.33□□□□□ -0.92
HLA-DOB-209ENST00000488325 DYNC2H1Q8NCM8 4307 aaKnown RBP9.33□□□□□ -0.92
HLA-DOB-209ENST00000488325 LOC102723971A0A1B0GUV8 181 aa9.32□□□□□ -0.92
HLA-DOB-209ENST00000488325 TGOLN2O43493 480 aa9.32□□□□□ -0.92
HLA-DOB-209ENST00000488325 NDUFS6O75380 124 aaKnown RBP9.32□□□□□ -0.92
HLA-DOB-209ENST00000488325 OR2C1O95371 312 aa9.32□□□□□ -0.92
HLA-DOB-209ENST00000488325 IGHV3-23P01764 117 aa9.32□□□□□ -0.92
HLA-DOB-209ENST00000488325 CLEC3BP05452 202 aa9.32□□□□□ -0.92
HLA-DOB-209ENST00000488325 CD5P06127 495 aa9.32□□□□□ -0.92
HLA-DOB-209ENST00000488325 ARL14EPLP0DKL9 152 aa9.32□□□□□ -0.92
HLA-DOB-209ENST00000488325 BCL2P10415 239 aa9.32□□□□□ -0.92
HLA-DOB-209ENST00000488325 ZP3P21754 424 aa9.32□□□□□ -0.92
HLA-DOB-209ENST00000488325 GCHFRP30047 84 aa9.32□□□□□ -0.92
HLA-DOB-209ENST00000488325 RAB9AP51151 201 aa9.32□□□□□ -0.92
HLA-DOB-209ENST00000488325 DEFA5Q01523 94 aa9.32□□□□□ -0.92
HLA-DOB-209ENST00000488325 RELQ04864 619 aaPredicted RBP9.32□□□□□ -0.92
HLA-DOB-209ENST00000488325 FOXE3Q13461 319 aa9.32□□□□□ -0.92
HLA-DOB-209ENST00000488325 HAGHQ16775 308 aa9.32□□□□□ -0.92
HLA-DOB-209ENST00000488325 TMEM95Q3KNT9 176 aa9.32□□□□□ -0.92
HLA-DOB-209ENST00000488325 SPATA31B1PQ5VZV4 182 aa9.32□□□□□ -0.92
HLA-DOB-209ENST00000488325 TEX38Q6PEX7 206 aa9.32□□□□□ -0.92
HLA-DOB-209ENST00000488325 CLEC19AQ6UXS0 136 aa9.32□□□□□ -0.92
HLA-DOB-209ENST00000488325 RNF125Q96EQ8 232 aa9.32□□□□□ -0.92
HLA-DOB-209ENST00000488325 CCDC140Q96MF4 163 aa9.32□□□□□ -0.92
HLA-DOB-209ENST00000488325 GNB4Q9HAV0 340 aa9.32□□□□□ -0.92
HLA-DOB-209ENST00000488325 SEPSECSQ9HD40 501 aaKnown RBP9.32□□□□□ -0.92
HLA-DOB-209ENST00000488325 TMEM167BQ9NRX6 74 aa9.32□□□□□ -0.92
HLA-DOB-209ENST00000488325 RNF114Q9Y508 228 aa9.32□□□□□ -0.92
HLA-DOB-209ENST00000488325 WI2-2373I1.2A0A1W2PRP0 233 aa9.31□□□□□ -0.92
HLA-DOB-209ENST00000488325 OR7C2O60412 319 aa9.31□□□□□ -0.92
HLA-DOB-209ENST00000488325 EIF3GO75821 320 aaKnown RBP eCLIP9.31□□□□□ -0.92
HLA-DOB-209ENST00000488325 HSPB1P04792 205 aaKnown RBP9.31□□□□□ -0.92
HLA-DOB-209ENST00000488325 IL4P05112 153 aa9.31□□□□□ -0.92
HLA-DOB-209ENST00000488325 CTSGP08311 255 aa9.31□□□□□ -0.92
HLA-DOB-209ENST00000488325 PATE2Q6UY27 113 aa9.31□□□□□ -0.92
HLA-DOB-209ENST00000488325 LINC00305Q7Z4B0 112 aa9.31□□□□□ -0.92
HLA-DOB-209ENST00000488325 TXNDC17Q9BRA2 123 aa9.31□□□□□ -0.92
HLA-DOB-209ENST00000488325 TMEM231Q9H6L2 316 aa9.31□□□□□ -0.92
HLA-DOB-209ENST00000488325 VAX2Q9UIW0 290 aa9.31□□□□□ -0.92
HLA-DOB-209ENST00000488325 ARL2-SNX15V9GYD0 113 aa9.31□□□□□ -0.92
HLA-DOB-209ENST00000488325 SACSQ9NZJ4 4579 aa9.31□□□□□ -0.92
HLA-DOB-209ENST00000488325 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.3□□□□□ -0.92
HLA-DOB-209ENST00000488325 TMEM218A2RU14 115 aa9.3□□□□□ -0.92
HLA-DOB-209ENST00000488325 BMPR1BO00238 502 aa9.3□□□□□ -0.92
HLA-DOB-209ENST00000488325 PSMB8P28062 276 aa9.3□□□□□ -0.92
HLA-DOB-209ENST00000488325 PROK1P58294 105 aa9.3□□□□□ -0.92
HLA-DOB-209ENST00000488325 ICAM4Q14773 271 aa9.3□□□□□ -0.92
HLA-DOB-209ENST00000488325 ZNF329Q86UD4 541 aa9.3□□□□□ -0.92
HLA-DOB-209ENST00000488325 ZNF491Q8N8L2 437 aa9.3□□□□□ -0.92
HLA-DOB-209ENST00000488325 OR5AU1Q8NGC0 362 aa9.3□□□□□ -0.92
HLA-DOB-209ENST00000488325 RXFP4Q8TDU9 374 aa9.3□□□□□ -0.92
HLA-DOB-209ENST00000488325 CHRDL1Q9BU40 450 aa9.3□□□□□ -0.92
HLA-DOB-209ENST00000488325 SCRT1Q9BWW7 348 aa9.3□□□□□ -0.92
HLA-DOB-209ENST00000488325 TMPRSS5Q9H3S3 457 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms