RNA–Protein interactions for RNA: ENST00000488321.1

TRIM54-204, Transcript of tripartite motif containing 54, humanhuman

TSL 2

Gene TRIM54, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-204ENST00000488321 TP53TG1Q9Y2A0 90 aa11.04□□□□□ -0.64
TRIM54-204ENST00000488321 KNCNA6PVL3 124 aa11.03□□□□□ -0.64
TRIM54-204ENST00000488321 K7EPK0 472 aa11.03□□□□□ -0.64
TRIM54-204ENST00000488321 CA1P00915 261 aaPredicted RBP11.03□□□□□ -0.64
TRIM54-204ENST00000488321 CAV2P51636 162 aa11.03□□□□□ -0.64
TRIM54-204ENST00000488321 DEFA1P59665 94 aa11.03□□□□□ -0.64
TRIM54-204ENST00000488321 DEFA3P59666 94 aa11.03□□□□□ -0.64
TRIM54-204ENST00000488321 SNRPD3P62318 126 aaKnown RBP11.03□□□□□ -0.64
TRIM54-204ENST00000488321 DLK1P80370 383 aa11.03□□□□□ -0.64
TRIM54-204ENST00000488321 ACTL10Q5JWF8 245 aa11.03□□□□□ -0.64
TRIM54-204ENST00000488321 TMEM182Q6ZP80 229 aaPredicted RBP11.03□□□□□ -0.64
TRIM54-204ENST00000488321 OR8I2Q8N0Y5 310 aa11.03□□□□□ -0.64
TRIM54-204ENST00000488321 OR1B1Q8NGR6 318 aa11.03□□□□□ -0.64
TRIM54-204ENST00000488321 RNF183Q96D59 192 aa11.03□□□□□ -0.64
TRIM54-204ENST00000488321 FBXL17Q9UF56 701 aa11.03□□□□□ -0.64
TRIM54-204ENST00000488321 INMT-MINDY4F8WBC2 141 aa11.02□□□□□ -0.65
TRIM54-204ENST00000488321 PVALBP20472 110 aaPredicted RBP11.02□□□□□ -0.65
TRIM54-204ENST00000488321 C1orf194Q5T5A4 169 aa11.02□□□□□ -0.65
TRIM54-204ENST00000488321 CYP2G1PQ6ZSU1 146 aa11.02□□□□□ -0.65
TRIM54-204ENST00000488321 TMEM147Q9BVK8 224 aa11.02□□□□□ -0.65
TRIM54-204ENST00000488321 SLC25A22Q9H936 323 aa11.02□□□□□ -0.65
TRIM54-204ENST00000488321 NPVFQ9HCQ7 196 aa11.02□□□□□ -0.65
TRIM54-204ENST00000488321 DOK5Q9P104 306 aa11.02□□□□□ -0.65
TRIM54-204ENST00000488321 KMT2CQ8NEZ4 4911 aaKnown RBP11.01□□□□□ -0.65
TRIM54-204ENST00000488321 ARL16Q0P5N6 197 aa11.01□□□□□ -0.65
TRIM54-204ENST00000488321 IL17DQ8TAD2 202 aa11.01□□□□□ -0.65
TRIM54-204ENST00000488321 FNDC10F2Z333 226 aa11□□□□□ -0.65
TRIM54-204ENST00000488321 GOSR2O14653 212 aa11□□□□□ -0.65
TRIM54-204ENST00000488321 PRAF2O60831 178 aa11□□□□□ -0.65
TRIM54-204ENST00000488321 LINC00869P0C866 280 aa11□□□□□ -0.65
TRIM54-204ENST00000488321 S100A7P31151 101 aa11□□□□□ -0.65
TRIM54-204ENST00000488321 RAP2BP61225 183 aa11□□□□□ -0.65
TRIM54-204ENST00000488321 SLC38A11Q08AI6 406 aa11□□□□□ -0.65
TRIM54-204ENST00000488321 RAB32Q13637 225 aa11□□□□□ -0.65
TRIM54-204ENST00000488321 TEPPQ6URK8 271 aa11□□□□□ -0.65
TRIM54-204ENST00000488321 TRPT1Q86TN4 253 aaKnown RBP11□□□□□ -0.65
TRIM54-204ENST00000488321 LINC00052Q96N35 136 aa11□□□□□ -0.65
TRIM54-204ENST00000488321 SLC45A2Q9UMX9 530 aa11□□□□□ -0.65
TRIM54-204ENST00000488321 A0A0J9YWU9 116 aa10.99□□□□□ -0.65
TRIM54-204ENST00000488321 FAM24AA6NFZ4 105 aa10.99□□□□□ -0.65
TRIM54-204ENST00000488321 ZNF98A6NK75 572 aa10.99□□□□□ -0.65
TRIM54-204ENST00000488321 DEDDO75618 318 aa10.99□□□□□ -0.65
TRIM54-204ENST00000488321 CST7O76096 145 aa10.99□□□□□ -0.65
TRIM54-204ENST00000488321 SIX6O95475 246 aa10.99□□□□□ -0.65
TRIM54-204ENST00000488321 OR5G3P0C626 314 aa10.99□□□□□ -0.65
TRIM54-204ENST00000488321 ID1P41134 155 aa10.99□□□□□ -0.65
TRIM54-204ENST00000488321 GALR1P47211 349 aa10.99□□□□□ -0.65
TRIM54-204ENST00000488321 SELENOTP62341 195 aa10.99□□□□□ -0.65
TRIM54-204ENST00000488321 TMEM217Q8N7C4 229 aa10.99□□□□□ -0.65
TRIM54-204ENST00000488321 GGACTQ9BVM4 153 aa10.99□□□□□ -0.65
TRIM54-204ENST00000488321 SLC25A32Q9H2D1 315 aa10.99□□□□□ -0.65
TRIM54-204ENST00000488321 SEPSECSQ9HD40 501 aaKnown RBP10.99□□□□□ -0.65
TRIM54-204ENST00000488321 HIGD1AQ9Y241 93 aa10.99□□□□□ -0.65
TRIM54-204ENST00000488321 HYPMO75409 117 aa10.98□□□□□ -0.65
TRIM54-204ENST00000488321 MORN3Q6PF18 240 aaPredicted RBP10.98□□□□□ -0.65
TRIM54-204ENST00000488321 GATAD1Q8WUU5 269 aa10.98□□□□□ -0.65
TRIM54-204ENST00000488321 RARRES2Q99969 163 aa10.98□□□□□ -0.65
TRIM54-204ENST00000488321 SCRT1Q9BWW7 348 aa10.98□□□□□ -0.65
TRIM54-204ENST00000488321 AGPAT2O15120 278 aa10.97□□□□□ -0.65
TRIM54-204ENST00000488321 SSNA1O43805 119 aa10.97□□□□□ -0.65
TRIM54-204ENST00000488321 SPP1P10451 314 aa10.97□□□□□ -0.65
TRIM54-204ENST00000488321 IL15RAQ13261 267 aa10.97□□□□□ -0.65
TRIM54-204ENST00000488321 ZNF546Q86UE3 836 aa10.97□□□□□ -0.65
TRIM54-204ENST00000488321 STX12Q86Y82 276 aa10.97□□□□□ -0.65
TRIM54-204ENST00000488321 OR11H2Q8NH07 326 aa10.97□□□□□ -0.65
TRIM54-204ENST00000488321 MARVELD1Q9BSK0 173 aa10.97□□□□□ -0.65
TRIM54-204ENST00000488321 RSG1Q9BU20 258 aa10.97□□□□□ -0.65
TRIM54-204ENST00000488321 SLC25A39Q9BZJ4 359 aaPredicted RBP10.97□□□□□ -0.65
TRIM54-204ENST00000488321 ARL6Q9H0F7 186 aa10.97□□□□□ -0.65
TRIM54-204ENST00000488321 C11orf1Q9H5F2 150 aa10.97□□□□□ -0.65
TRIM54-204ENST00000488321 LYRM2Q9NU23 88 aaPredicted RBP10.97□□□□□ -0.65
TRIM54-204ENST00000488321 DNAH7Q8WXX0 4024 aa10.97□□□□□ -0.65
TRIM54-204ENST00000488321 H3BRN7 92 aa10.96□□□□□ -0.65
TRIM54-204ENST00000488321 PSMB3P49720 205 aa10.96□□□□□ -0.65
TRIM54-204ENST00000488321 MEOX2P50222 304 aa10.96□□□□□ -0.65
TRIM54-204ENST00000488321 SULT1A1P50225 295 aa10.96□□□□□ -0.65
TRIM54-204ENST00000488321 FGL1Q08830 312 aa10.96□□□□□ -0.65
TRIM54-204ENST00000488321 LRRC37A5PQ49AS3 106 aa10.96□□□□□ -0.65
TRIM54-204ENST00000488321 S100A7AQ86SG5 101 aa10.96□□□□□ -0.65
TRIM54-204ENST00000488321 TMEM252Q8N6L7 170 aa10.96□□□□□ -0.65
TRIM54-204ENST00000488321 C16orf92Q96LL3 132 aa10.96□□□□□ -0.65
TRIM54-204ENST00000488321 GPR82Q96P67 336 aa10.96□□□□□ -0.65
TRIM54-204ENST00000488321 UHRF2Q96PU4 802 aa10.96□□□□□ -0.65
TRIM54-204ENST00000488321 SHANK2-AS3Q9BTD1 123 aa10.96□□□□□ -0.65
TRIM54-204ENST00000488321 UQCC1Q9NVA1 299 aa10.96□□□□□ -0.65
TRIM54-204ENST00000488321 IGSF23A1L1A6 192 aa10.95□□□□□ -0.66
TRIM54-204ENST00000488321 ISLRO14498 428 aa10.95□□□□□ -0.66
TRIM54-204ENST00000488321 SOCS3O14543 225 aa10.95□□□□□ -0.66
TRIM54-204ENST00000488321 IGKV3-20P01619 116 aa10.95□□□□□ -0.66
TRIM54-204ENST00000488321 RLN2P04090 185 aa10.95□□□□□ -0.66
TRIM54-204ENST00000488321 C4BPBP20851 252 aa10.95□□□□□ -0.66
TRIM54-204ENST00000488321 DEFB1P60022 68 aa10.95□□□□□ -0.66
TRIM54-204ENST00000488321 PLP1P60201 277 aa10.95□□□□□ -0.66
TRIM54-204ENST00000488321 HBG1P69891 147 aa10.95□□□□□ -0.66
TRIM54-204ENST00000488321 HBG2P69892 147 aa10.95□□□□□ -0.66
TRIM54-204ENST00000488321 RAB31Q13636 194 aa10.95□□□□□ -0.66
TRIM54-204ENST00000488321 PMS2P11Q13670 270 aa10.95□□□□□ -0.66
TRIM54-204ENST00000488321 SAMD13Q5VXD3 122 aa10.95□□□□□ -0.66
TRIM54-204ENST00000488321 MGST2Q99735 147 aa10.95□□□□□ -0.66
TRIM54-204ENST00000488321 ARV1Q9H2C2 271 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms