RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 DEFB1P60022 68 aa16.28■□□□□ 0.2
PTPN4-211ENST00000488279 UBE2MP61081 183 aaKnown RBP16.28■□□□□ 0.2
PTPN4-211ENST00000488279 PRR20EP86478 221 aa16.28■□□□□ 0.2
PTPN4-211ENST00000488279 PRR20CP86479 221 aa16.28■□□□□ 0.2
PTPN4-211ENST00000488279 PRR20DP86480 221 aa16.28■□□□□ 0.2
PTPN4-211ENST00000488279 PRR20BP86481 221 aa16.28■□□□□ 0.2
PTPN4-211ENST00000488279 PRR20AP86496 221 aa16.28■□□□□ 0.2
PTPN4-211ENST00000488279 SPANXN5Q5MJ07 72 aa16.28■□□□□ 0.2
PTPN4-211ENST00000488279 ISLRO14498 428 aa16.27■□□□□ 0.2
PTPN4-211ENST00000488279 SOCS3O14543 225 aa16.27■□□□□ 0.2
PTPN4-211ENST00000488279 INPP1P49441 399 aa16.27■□□□□ 0.2
PTPN4-211ENST00000488279 C12orf74Q32Q52 190 aa16.27■□□□□ 0.2
PTPN4-211ENST00000488279 SAMD13Q5VXD3 122 aa16.27■□□□□ 0.2
PTPN4-211ENST00000488279 SPATA31B1PQ5VZV4 182 aa16.27■□□□□ 0.2
PTPN4-211ENST00000488279 ZNF705AQ6ZN79 300 aaPredicted RBP16.27■□□□□ 0.2
PTPN4-211ENST00000488279 CLUHP3Q96NS8 147 aa16.27■□□□□ 0.2
PTPN4-211ENST00000488279 CELA1Q9UNI1 258 aa16.27■□□□□ 0.2
PTPN4-211ENST00000488279 IGHV4-4A0A075B6R2 117 aa16.26■□□□□ 0.19
PTPN4-211ENST00000488279 PRSS46E5RG02 174 aa16.26■□□□□ 0.19
PTPN4-211ENST00000488279 OR4B1Q8NGF8 309 aa16.26■□□□□ 0.19
PTPN4-211ENST00000488279 NEU1Q99519 415 aa16.26■□□□□ 0.19
PTPN4-211ENST00000488279 SLC45A2Q9UMX9 530 aa16.26■□□□□ 0.19
PTPN4-211ENST00000488279 STRAPQ9Y3F4 350 aaKnown RBP16.26■□□□□ 0.19
PTPN4-211ENST00000488279 DNAH10Q8IVF4 4471 aa16.25■□□□□ 0.19
PTPN4-211ENST00000488279 DEFB131BA0A096LNP1 70 aa16.25■□□□□ 0.19
PTPN4-211ENST00000488279 C9orf170A2RU37 121 aa16.25■□□□□ 0.19
PTPN4-211ENST00000488279 SMIM9A6NGZ8 99 aa16.25■□□□□ 0.19
PTPN4-211ENST00000488279 S100A7P31151 101 aa16.25■□□□□ 0.19
PTPN4-211ENST00000488279 GALR1P47211 349 aa16.25■□□□□ 0.19
PTPN4-211ENST00000488279 MEOX2P50222 304 aa16.25■□□□□ 0.19
PTPN4-211ENST00000488279 FXYD7P58549 80 aa16.25■□□□□ 0.19
PTPN4-211ENST00000488279 EBLN2Q6P2I7 272 aa16.25■□□□□ 0.19
PTPN4-211ENST00000488279 ZNF767PQ75MW2 155 aa16.25■□□□□ 0.19
PTPN4-211ENST00000488279 BPIFCQ8NFQ6 507 aa16.25■□□□□ 0.19
PTPN4-211ENST00000488279 RNF126Q9BV68 326 aa16.25■□□□□ 0.19
PTPN4-211ENST00000488279 SRRQ9GZT4 340 aa16.25■□□□□ 0.19
PTPN4-211ENST00000488279 NAP1L6A6NFF2 107 aa16.24■□□□□ 0.19
PTPN4-211ENST00000488279 ZNF98A6NK75 572 aa16.24■□□□□ 0.19
PTPN4-211ENST00000488279 ZNF705FA8MVS1 300 aaPredicted RBP16.24■□□□□ 0.19
PTPN4-211ENST00000488279 ZNF701M0R085 212 aaPredicted RBP16.24■□□□□ 0.19
PTPN4-211ENST00000488279 ZNF705DP0CH99 300 aaPredicted RBP16.24■□□□□ 0.19
PTPN4-211ENST00000488279 ZNF705BP0CI00 300 aaPredicted RBP16.24■□□□□ 0.19
PTPN4-211ENST00000488279 ORM2P19652 201 aa16.24■□□□□ 0.19
PTPN4-211ENST00000488279 AKR1C1Q04828 323 aa16.24■□□□□ 0.19
PTPN4-211ENST00000488279 C16orf92Q96LL3 132 aa16.24■□□□□ 0.19
PTPN4-211ENST00000488279 RBM38Q9H0Z9 239 aaKnown RBP16.24■□□□□ 0.19
PTPN4-211ENST00000488279 SLC25A22Q9H936 323 aa16.24■□□□□ 0.19
PTPN4-211ENST00000488279 IGHV3OR16-12A0A075B7B8 117 aa16.23■□□□□ 0.19
PTPN4-211ENST00000488279 TMEM189A5PLL7 270 aa16.23■□□□□ 0.19
PTPN4-211ENST00000488279 H3BP45 60 aa16.23■□□□□ 0.19
PTPN4-211ENST00000488279 PSG9Q00887 426 aa16.23■□□□□ 0.19
PTPN4-211ENST00000488279 ID3Q02535 119 aa16.23■□□□□ 0.19
PTPN4-211ENST00000488279 TRIQKQ629K1 86 aa16.23■□□□□ 0.19
PTPN4-211ENST00000488279 GSG1LQ6UXU4 331 aa16.23■□□□□ 0.19
PTPN4-211ENST00000488279 ZNF709Q8N972 641 aa16.23■□□□□ 0.19
PTPN4-211ENST00000488279 RSG1Q9BU20 258 aa16.23■□□□□ 0.19
PTPN4-211ENST00000488279 RPRMQ9NS64 109 aa16.23■□□□□ 0.19
PTPN4-211ENST00000488279 ADAP1O75689 374 aa16.22■□□□□ 0.19
PTPN4-211ENST00000488279 NDUFB6O95139 128 aa16.22■□□□□ 0.19
PTPN4-211ENST00000488279 IFNA21P01568 189 aa16.22■□□□□ 0.19
PTPN4-211ENST00000488279 SPART-AS1P0CW21 52 aa16.22■□□□□ 0.19
PTPN4-211ENST00000488279 GATA2P23769 480 aaPredicted RBP16.22■□□□□ 0.19
PTPN4-211ENST00000488279 PAX9P55771 341 aa16.22■□□□□ 0.19
PTPN4-211ENST00000488279 POLR2GP62487 172 aaKnown RBP eCLIP16.22■□□□□ 0.19
PTPN4-211ENST00000488279 BAK1Q16611 211 aa16.22■□□□□ 0.19
PTPN4-211ENST00000488279 FAM78BQ5VT40 261 aa16.22■□□□□ 0.19
PTPN4-211ENST00000488279 TMEM182Q6ZP80 229 aaPredicted RBP16.22■□□□□ 0.19
PTPN4-211ENST00000488279 OR4D5Q8NGN0 318 aa16.22■□□□□ 0.19
PTPN4-211ENST00000488279 TMEM147Q9BVK8 224 aa16.22■□□□□ 0.19
PTPN4-211ENST00000488279 SLC25A32Q9H2D1 315 aa16.22■□□□□ 0.19
PTPN4-211ENST00000488279 F6UB75 175 aa16.21■□□□□ 0.19
PTPN4-211ENST00000488279 EMP1P54849 157 aa16.21■□□□□ 0.19
PTPN4-211ENST00000488279 ACOT7LQ6ZUV0 252 aa16.21■□□□□ 0.19
PTPN4-211ENST00000488279 TMEM144Q7Z5S9 345 aa16.21■□□□□ 0.19
PTPN4-211ENST00000488279 OR1B1Q8NGR6 318 aa16.21■□□□□ 0.19
PTPN4-211ENST00000488279 GPR82Q96P67 336 aa16.21■□□□□ 0.19
PTPN4-211ENST00000488279 SLC35B3Q9H1N7 401 aa16.21■□□□□ 0.19
PTPN4-211ENST00000488279 PSENENQ9NZ42 101 aa16.21■□□□□ 0.19
PTPN4-211ENST00000488279 FLVCR2Q9UPI3 526 aa16.21■□□□□ 0.19
PTPN4-211ENST00000488279 RFNGQ9Y644 331 aa16.21■□□□□ 0.19
PTPN4-211ENST00000488279 A0A0J9YX75 114 aa16.2■□□□□ 0.18
PTPN4-211ENST00000488279 C20orf173Q96LM9 149 aa16.2■□□□□ 0.18
PTPN4-211ENST00000488279 GOLT1BQ9Y3E0 138 aa16.2■□□□□ 0.18
PTPN4-211ENST00000488279 LINC00854A0A1B0GVQ3 168 aa16.19■□□□□ 0.18
PTPN4-211ENST00000488279 SMCO3A2RU48 225 aa16.19■□□□□ 0.18
PTPN4-211ENST00000488279 CENPXA8MT69 81 aa16.19■□□□□ 0.18
PTPN4-211ENST00000488279 AMBPP02760 352 aa16.19■□□□□ 0.18
PTPN4-211ENST00000488279 OR4E1P0C645 316 aa16.19■□□□□ 0.18
PTPN4-211ENST00000488279 NDUFAF3Q9BU61 184 aa16.19■□□□□ 0.18
PTPN4-211ENST00000488279 SSSCA1O60232 199 aa16.18■□□□□ 0.18
PTPN4-211ENST00000488279 IL5P05113 134 aa16.18■□□□□ 0.18
PTPN4-211ENST00000488279 C4orf46Q504U0 113 aa16.18■□□□□ 0.18
PTPN4-211ENST00000488279 CYP2G1PQ6ZSU1 146 aa16.18■□□□□ 0.18
PTPN4-211ENST00000488279 SMIM8Q96KF7 97 aa16.18■□□□□ 0.18
PTPN4-211ENST00000488279 C17orf77Q96MU5 243 aa16.18■□□□□ 0.18
PTPN4-211ENST00000488279 C7orf50Q9BRJ6 194 aaKnown RBP16.18■□□□□ 0.18
PTPN4-211ENST00000488279 DOK5Q9P104 306 aa16.18■□□□□ 0.18
PTPN4-211ENST00000488279 DNAH6Q9C0G6 4158 aa16.17■□□□□ 0.18
PTPN4-211ENST00000488279 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.17■□□□□ 0.18
PTPN4-211ENST00000488279 TEX48A0A1B0GUV7 120 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms