RNA–Protein interactions for RNA: ENST00000488277.1

EPB41-211, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 3

Gene EPB41, Length 262 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-211ENST00000488277 GRINAQ7Z429 371 aa0.81□□□□□ -2.28
EPB41-211ENST00000488277 Q8IYB0 196 aa0.81□□□□□ -2.28
EPB41-211ENST00000488277 CLECL1Q8IZS7 167 aa0.81□□□□□ -2.28
EPB41-211ENST00000488277 FAM24BQ8N5W8 94 aa0.81□□□□□ -2.28
EPB41-211ENST00000488277 C3orf56Q8N813 242 aa0.81□□□□□ -2.28
EPB41-211ENST00000488277 PPTC7Q8NI37 304 aa0.81□□□□□ -2.28
EPB41-211ENST00000488277 ZNF418Q8TF45 676 aaPredicted RBP0.81□□□□□ -2.28
EPB41-211ENST00000488277 SFT2D1Q8WV19 159 aa0.81□□□□□ -2.28
EPB41-211ENST00000488277 CANT1Q8WVQ1 401 aa0.81□□□□□ -2.28
EPB41-211ENST00000488277 DYDC1Q8WWB3 177 aa0.81□□□□□ -2.28
EPB41-211ENST00000488277 MALSU1Q96EH3 234 aa0.81□□□□□ -2.28
EPB41-211ENST00000488277 NPCDR1Q9BY65 106 aa0.81□□□□□ -2.28
EPB41-211ENST00000488277 PBOV1Q9GZY1 135 aa0.81□□□□□ -2.28
EPB41-211ENST00000488277 C14orf132Q9NPU4 83 aa0.81□□□□□ -2.28
EPB41-211ENST00000488277 HS3ST2Q9Y278 367 aa0.81□□□□□ -2.28
EPB41-211ENST00000488277 ANAPC1Q9H1A4 1944 aa0.81□□□□□ -2.28
EPB41-211ENST00000488277 CR1P17927 2039 aa0.81□□□□□ -2.28
EPB41-211ENST00000488277 ARHGEF28Q8N1W1 1705 aaKnown RBP0.81□□□□□ -2.28
EPB41-211ENST00000488277 RP1P56715 2156 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 OBSL1O75147 1896 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 SDK1Q7Z5N4 2213 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 MYH7BA7E2Y1 1941 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 PCDH15Q96QU1 1955 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 TRBV6-8A0A0A6YYG3 113 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 TRAV12-1A0A0B4J245 112 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 K7ERJ3 54 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 GPR31O00270 319 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 MRPS14O60783 128 aaKnown RBP0.8□□□□□ -2.28
EPB41-211ENST00000488277 IFNA14P01570 189 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 TRGC2P03986 189 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 RNASE3P12724 160 aaKnown RBP0.8□□□□□ -2.28
EPB41-211ENST00000488277 OGNP20774 298 aaKnown RBP0.8□□□□□ -2.28
EPB41-211ENST00000488277 TMBIM6P55061 237 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 ARPP19P56211 112 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 RAB4BP61018 213 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 PDE6HQ13956 83 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 LTC4SQ16873 150 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 EIF5AL1Q6IS14 154 aaKnown RBP0.8□□□□□ -2.28
EPB41-211ENST00000488277 CROCCP2Q86T23 111 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 C12orf29Q8N999 325 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 OR2T35Q8NGX2 323 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 OR10K1Q8NGX5 313 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 OR4C6Q8NH72 309 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 TEX47Q8TBZ9 253 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 ZNF714Q96N38 554 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 GPX7Q96SL4 187 aaPredicted RBP0.8□□□□□ -2.28
EPB41-211ENST00000488277 BOLA2Q9H3K6 86 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 MED11Q9P086 117 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 MICAL3Q7RTP6 2002 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 HEATR5BQ9P2D3 2071 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 TAF1LQ8IZX4 1826 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 SBF1O95248 1867 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 CEP164Q9UPV0 1460 aa0.8□□□□□ -2.28
EPB41-211ENST00000488277 DENND4CQ5VZ89 1909 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 PBRM1Q86U86 1689 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 IGKV2-40A0A087WW87 121 aaPredicted RBP0.79□□□□□ -2.28
EPB41-211ENST00000488277 IGKV3D-7A0A0C4DH55 119 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 IGKV3OR2-268A0A0C4DH90 116 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 A0A1B0GV72 72 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 TLCD2A6NGC4 264 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 A8MWV9 139 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 HCRTO43612 131 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 HYPMO75409 117 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 IGKV2D-40P01614 121 aaPredicted RBP0.79□□□□□ -2.28
EPB41-211ENST00000488277 LYNX1P0DP58 116 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 HLA-EP13747 358 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 ZNF93P35789 620 aaPredicted RBP0.79□□□□□ -2.28
EPB41-211ENST00000488277 MSMO1Q15800 293 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 KRTAP21-3Q3LHN1 58 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 FKBP1CQ5VVH2 108 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 DCUN1D2Q6PH85 259 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.79□□□□□ -2.28
EPB41-211ENST00000488277 SMIM15Q7Z3B0 74 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 DEFB119Q8N690 84 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 OR4K15Q8NH41 348 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 TMEM254Q8TBM7 123 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 TEX37Q96LM6 180 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 RETNLBQ9BQ08 111 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 LINC00467Q9BRT7 94 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 POPDC3Q9HBV1 291 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 MRPL40Q9NQ50 206 aaKnown RBP0.79□□□□□ -2.28
EPB41-211ENST00000488277 MED9Q9NWA0 146 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 ATPIF1Q9UII2 106 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 KLK9Q9UKQ9 250 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 DOCK4Q8N1I0 1966 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 CAMSAP2Q08AD1 1489 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 MYOFQ9NZM1 2061 aa0.79□□□□□ -2.28
EPB41-211ENST00000488277 COL4A5P29400 1685 aa0.78□□□□□ -2.28
EPB41-211ENST00000488277 SCN8AQ9UQD0 1980 aa0.78□□□□□ -2.28
EPB41-211ENST00000488277 IGKV3-7A0A075B6H7 116 aa0.78□□□□□ -2.28
EPB41-211ENST00000488277 MAP1LC3B2A6NCE7 125 aa0.78□□□□□ -2.28
EPB41-211ENST00000488277 CCDC160A6NGH7 325 aa0.78□□□□□ -2.28
EPB41-211ENST00000488277 B4DSR2 109 aa0.78□□□□□ -2.28
EPB41-211ENST00000488277 H0YJX3 145 aa0.78□□□□□ -2.28
EPB41-211ENST00000488277 CD2P06729 351 aa0.78□□□□□ -2.28
EPB41-211ENST00000488277 TEX261Q6UWH6 196 aa0.78□□□□□ -2.28
EPB41-211ENST00000488277 UNQ6190/PRO20217Q6UXQ8 127 aa0.78□□□□□ -2.28
EPB41-211ENST00000488277 OR5D14Q8NGL3 314 aa0.78□□□□□ -2.28
EPB41-211ENST00000488277 PLEKHB2Q96CS7 222 aa0.78□□□□□ -2.28
EPB41-211ENST00000488277 MAP1LC3BQ9GZQ8 125 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms