RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 ARL16Q0P5N6 197 aa12.56□□□□□ -0.4
HMG20B-212ENST00000487894 BPIFCQ8NFQ6 507 aa12.56□□□□□ -0.4
HMG20B-212ENST00000487894 OR10P1Q8NGE3 313 aa12.56□□□□□ -0.4
HMG20B-212ENST00000487894 MARVELD1Q9BSK0 173 aa12.56□□□□□ -0.4
HMG20B-212ENST00000487894 GPN1Q9HCN4 374 aaPredicted RBP12.56□□□□□ -0.4
HMG20B-212ENST00000487894 C3orf84H3BNL1 204 aa12.55□□□□□ -0.4
HMG20B-212ENST00000487894 L7N2F9 121 aa12.55□□□□□ -0.4
HMG20B-212ENST00000487894 UBE2CO00762 179 aa12.55□□□□□ -0.4
HMG20B-212ENST00000487894 VAMP2P63027 116 aa12.55□□□□□ -0.4
HMG20B-212ENST00000487894 RAB32Q13637 225 aa12.55□□□□□ -0.4
HMG20B-212ENST00000487894 DEFB135Q30KP9 77 aa12.55□□□□□ -0.4
HMG20B-212ENST00000487894 CYP2G1PQ6ZSU1 146 aa12.55□□□□□ -0.4
HMG20B-212ENST00000487894 Q6ZWC4 215 aa12.55□□□□□ -0.4
HMG20B-212ENST00000487894 NRN1Q9NPD7 142 aa12.55□□□□□ -0.4
HMG20B-212ENST00000487894 MGAT4CQ9UBM8 478 aa12.55□□□□□ -0.4
HMG20B-212ENST00000487894 PFDN2Q9UHV9 154 aa12.55□□□□□ -0.4
HMG20B-212ENST00000487894 S100A10P60903 97 aa12.54□□□□□ -0.4
HMG20B-212ENST00000487894 C1orf194Q5T5A4 169 aa12.54□□□□□ -0.4
HMG20B-212ENST00000487894 SLC45A2Q9UMX9 530 aa12.54□□□□□ -0.4
HMG20B-212ENST00000487894 TP53TG1Q9Y2A0 90 aa12.54□□□□□ -0.4
HMG20B-212ENST00000487894 GOSR2O14653 212 aa12.53□□□□□ -0.4
HMG20B-212ENST00000487894 PPP1R14BQ96C90 147 aa12.53□□□□□ -0.4
HMG20B-212ENST00000487894 NPVFQ9HCQ7 196 aa12.53□□□□□ -0.4
HMG20B-212ENST00000487894 FBXL17Q9UF56 701 aa12.53□□□□□ -0.4
HMG20B-212ENST00000487894 FAM24AA6NFZ4 105 aa12.52□□□□□ -0.41
HMG20B-212ENST00000487894 DEDDO75618 318 aa12.52□□□□□ -0.41
HMG20B-212ENST00000487894 SIX6O95475 246 aa12.52□□□□□ -0.41
HMG20B-212ENST00000487894 ORM2P19652 201 aa12.52□□□□□ -0.41
HMG20B-212ENST00000487894 PVALBP20472 110 aaPredicted RBP12.52□□□□□ -0.41
HMG20B-212ENST00000487894 BCAP31P51572 246 aa12.52□□□□□ -0.41
HMG20B-212ENST00000487894 CAV2P51636 162 aa12.52□□□□□ -0.41
HMG20B-212ENST00000487894 SLC38A11Q08AI6 406 aa12.52□□□□□ -0.41
HMG20B-212ENST00000487894 PSMG4Q5JS54 123 aa12.52□□□□□ -0.41
HMG20B-212ENST00000487894 TEPPQ6URK8 271 aa12.52□□□□□ -0.41
HMG20B-212ENST00000487894 RNF183Q96D59 192 aa12.52□□□□□ -0.41
HMG20B-212ENST00000487894 GGACTQ9BVM4 153 aa12.52□□□□□ -0.41
HMG20B-212ENST00000487894 CSTL1Q9H114 145 aa12.52□□□□□ -0.41
HMG20B-212ENST00000487894 SEPSECSQ9HD40 501 aaKnown RBP12.52□□□□□ -0.41
HMG20B-212ENST00000487894 LYRM2Q9NU23 88 aaPredicted RBP12.52□□□□□ -0.41
HMG20B-212ENST00000487894 DYNC2H1Q8NCM8 4307 aaKnown RBP12.52□□□□□ -0.41
HMG20B-212ENST00000487894 TENM2Q9NT68 2774 aa12.51□□□□□ -0.41
HMG20B-212ENST00000487894 ZNF98A6NK75 572 aa12.51□□□□□ -0.41
HMG20B-212ENST00000487894 KNCNA6PVL3 124 aa12.51□□□□□ -0.41
HMG20B-212ENST00000487894 SPRY2O43597 315 aa12.51□□□□□ -0.41
HMG20B-212ENST00000487894 CST7O76096 145 aa12.51□□□□□ -0.41
HMG20B-212ENST00000487894 LINC00869P0C866 280 aa12.51□□□□□ -0.41
HMG20B-212ENST00000487894 SELENOTP62341 195 aa12.51□□□□□ -0.41
HMG20B-212ENST00000487894 CASC10Q5T4H9 136 aa12.51□□□□□ -0.41
HMG20B-212ENST00000487894 TRPT1Q86TN4 253 aaKnown RBP12.51□□□□□ -0.41
HMG20B-212ENST00000487894 STHQ8IWL8 128 aa12.51□□□□□ -0.41
HMG20B-212ENST00000487894 OR1B1Q8NGR6 318 aa12.51□□□□□ -0.41
HMG20B-212ENST00000487894 LYSTQ99698 3801 aa12.51□□□□□ -0.41
HMG20B-212ENST00000487894 TMEM147Q9BVK8 224 aa12.51□□□□□ -0.41
HMG20B-212ENST00000487894 SLC25A32Q9H2D1 315 aa12.51□□□□□ -0.41
HMG20B-212ENST00000487894 DOK5Q9P104 306 aa12.51□□□□□ -0.41
HMG20B-212ENST00000487894 hCG_2014768A0A024R1R8 64 aa12.5□□□□□ -0.41
HMG20B-212ENST00000487894 IGSF23A1L1A6 192 aa12.5□□□□□ -0.41
HMG20B-212ENST00000487894 H3BRN7 92 aa12.5□□□□□ -0.41
HMG20B-212ENST00000487894 SOCS3O14543 225 aa12.5□□□□□ -0.41
HMG20B-212ENST00000487894 PLP1P60201 277 aa12.5□□□□□ -0.41
HMG20B-212ENST00000487894 SNRPD3P62318 126 aaKnown RBP12.5□□□□□ -0.41
HMG20B-212ENST00000487894 OR8I2Q8N0Y5 310 aa12.5□□□□□ -0.41
HMG20B-212ENST00000487894 NMES1Q9C002 83 aa12.5□□□□□ -0.41
HMG20B-212ENST00000487894 SLC25A22Q9H936 323 aa12.5□□□□□ -0.41
HMG20B-212ENST00000487894 CA1P00915 261 aaPredicted RBP12.49□□□□□ -0.41
HMG20B-212ENST00000487894 LYL1P12980 280 aa12.49□□□□□ -0.41
HMG20B-212ENST00000487894 SULT1A1P50225 295 aa12.49□□□□□ -0.41
HMG20B-212ENST00000487894 TMEM252Q8N6L7 170 aa12.49□□□□□ -0.41
HMG20B-212ENST00000487894 MGST2Q99735 147 aa12.49□□□□□ -0.41
HMG20B-212ENST00000487894 SCRT1Q9BWW7 348 aa12.49□□□□□ -0.41
HMG20B-212ENST00000487894 AGPAT2O15120 278 aa12.48□□□□□ -0.41
HMG20B-212ENST00000487894 H2BFSP57053 126 aa12.48□□□□□ -0.41
HMG20B-212ENST00000487894 ACTL10Q5JWF8 245 aa12.48□□□□□ -0.41
HMG20B-212ENST00000487894 ZFAND6Q6FIF0 208 aa12.48□□□□□ -0.41
HMG20B-212ENST00000487894 ZNF546Q86UE3 836 aa12.48□□□□□ -0.41
HMG20B-212ENST00000487894 TMEM217Q8N7C4 229 aa12.48□□□□□ -0.41
HMG20B-212ENST00000487894 C17orf77Q96MU5 243 aa12.48□□□□□ -0.41
HMG20B-212ENST00000487894 SLC25A39Q9BZJ4 359 aaPredicted RBP12.48□□□□□ -0.41
HMG20B-212ENST00000487894 HIGD1AQ9Y241 93 aa12.48□□□□□ -0.41
HMG20B-212ENST00000487894 HYPMO75409 117 aa12.47□□□□□ -0.41
HMG20B-212ENST00000487894 C4BPBP20851 252 aa12.47□□□□□ -0.41
HMG20B-212ENST00000487894 GALR1P47211 349 aa12.47□□□□□ -0.41
HMG20B-212ENST00000487894 PSMB3P49720 205 aa12.47□□□□□ -0.41
HMG20B-212ENST00000487894 RAP2BP61225 183 aa12.47□□□□□ -0.41
HMG20B-212ENST00000487894 VWC2Q2TAL6 325 aa12.47□□□□□ -0.41
HMG20B-212ENST00000487894 PATE2Q6UY27 113 aa12.47□□□□□ -0.41
HMG20B-212ENST00000487894 STX12Q86Y82 276 aa12.47□□□□□ -0.41
HMG20B-212ENST00000487894 GATAD1Q8WUU5 269 aa12.47□□□□□ -0.41
HMG20B-212ENST00000487894 UHRF2Q96PU4 802 aa12.47□□□□□ -0.41
HMG20B-212ENST00000487894 SHANK2-AS3Q9BTD1 123 aa12.47□□□□□ -0.41
HMG20B-212ENST00000487894 ARL6Q9H0F7 186 aa12.47□□□□□ -0.41
HMG20B-212ENST00000487894 UQCC1Q9NVA1 299 aa12.47□□□□□ -0.41
HMG20B-212ENST00000487894 A0A0J9YWU9 116 aa12.46□□□□□ -0.41
HMG20B-212ENST00000487894 H0YIZ8 118 aa12.46□□□□□ -0.41
HMG20B-212ENST00000487894 SSNA1O43805 119 aa12.46□□□□□ -0.41
HMG20B-212ENST00000487894 PTTG1O95997 202 aa12.46□□□□□ -0.41
HMG20B-212ENST00000487894 GIG44P09565 113 aaPredicted RBP12.46□□□□□ -0.41
HMG20B-212ENST00000487894 OR5G3P0C626 314 aa12.46□□□□□ -0.41
HMG20B-212ENST00000487894 SPP1P10451 314 aa12.46□□□□□ -0.41
HMG20B-212ENST00000487894 S100A7P31151 101 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms