RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 IAPPP10997 89 aa8.74□□□□□ -1.01
VPS16-208ENST00000487461 ANXA3P12429 323 aa8.74□□□□□ -1.01
VPS16-208ENST00000487461 NUP62P37198 522 aaPredicted RBP8.74□□□□□ -1.01
VPS16-208ENST00000487461 LYZP61626 148 aa8.74□□□□□ -1.01
VPS16-208ENST00000487461 SRPXP78539 464 aa8.74□□□□□ -1.01
VPS16-208ENST00000487461 OR2F1Q13607 317 aa8.74□□□□□ -1.01
VPS16-208ENST00000487461 C1orf194Q5T5A4 169 aa8.74□□□□□ -1.01
VPS16-208ENST00000487461 NEU1Q99519 415 aa8.74□□□□□ -1.01
VPS16-208ENST00000487461 PFDN2Q9UHV9 154 aa8.74□□□□□ -1.01
VPS16-208ENST00000487461 IGKV1OR2-108A0A075B7D4 117 aa8.73□□□□□ -1.01
VPS16-208ENST00000487461 ZNF705FA8MVS1 300 aaPredicted RBP8.73□□□□□ -1.01
VPS16-208ENST00000487461 SNRPGP15A8MWD9 76 aa8.73□□□□□ -1.01
VPS16-208ENST00000487461 AMBPP02760 352 aa8.73□□□□□ -1.01
VPS16-208ENST00000487461 ZNF705DP0CH99 300 aaPredicted RBP8.73□□□□□ -1.01
VPS16-208ENST00000487461 ZNF705BP0CI00 300 aaPredicted RBP8.73□□□□□ -1.01
VPS16-208ENST00000487461 ID1P41134 155 aa8.73□□□□□ -1.01
VPS16-208ENST00000487461 EMP1P54849 157 aa8.73□□□□□ -1.01
VPS16-208ENST00000487461 FOXI2Q6ZQN5 318 aa8.73□□□□□ -1.01
VPS16-208ENST00000487461 TMED4Q7Z7H5 227 aa8.73□□□□□ -1.01
VPS16-208ENST00000487461 ZNF709Q8N972 641 aa8.73□□□□□ -1.01
VPS16-208ENST00000487461 CLUHP3Q96NS8 147 aa8.73□□□□□ -1.01
VPS16-208ENST00000487461 TRGV9Q99603 122 aa8.73□□□□□ -1.01
VPS16-208ENST00000487461 HECTD4Q9Y4D8 3996 aa8.72□□□□□ -1.01
VPS16-208ENST00000487461 IGHV3OR16-12A0A075B7B8 117 aa8.72□□□□□ -1.01
VPS16-208ENST00000487461 DUXBA0A1W2PPF3 345 aa8.72□□□□□ -1.01
VPS16-208ENST00000487461 SMIM9A6NGZ8 99 aa8.72□□□□□ -1.01
VPS16-208ENST00000487461 PSMB3P49720 205 aa8.72□□□□□ -1.01
VPS16-208ENST00000487461 RAB11AP62491 216 aa8.72□□□□□ -1.01
VPS16-208ENST00000487461 TMEM128Q5BJH2 165 aa8.72□□□□□ -1.01
VPS16-208ENST00000487461 POM121L12Q8N7R1 296 aa8.72□□□□□ -1.01
VPS16-208ENST00000487461 LRTM2Q8N967 370 aa8.72□□□□□ -1.01
VPS16-208ENST00000487461 THAP8Q8NA92 274 aa8.72□□□□□ -1.01
VPS16-208ENST00000487461 OR4B1Q8NGF8 309 aa8.72□□□□□ -1.01
VPS16-208ENST00000487461 C17orf77Q96MU5 243 aa8.72□□□□□ -1.01
VPS16-208ENST00000487461 PLA2G2EQ9NZK7 142 aa8.72□□□□□ -1.01
VPS16-208ENST00000487461 PAIP2BQ9ULR5 123 aaKnown RBP8.72□□□□□ -1.01
VPS16-208ENST00000487461 F6UB75 175 aa8.71□□□□□ -1.02
VPS16-208ENST00000487461 FABP1P07148 127 aa8.71□□□□□ -1.02
VPS16-208ENST00000487461 SPART-AS1P0CW21 52 aa8.71□□□□□ -1.02
VPS16-208ENST00000487461 SLC25A6P12236 298 aa8.71□□□□□ -1.02
VPS16-208ENST00000487461 PSG9Q00887 426 aa8.71□□□□□ -1.02
VPS16-208ENST00000487461 ZNF79Q15937 498 aa8.71□□□□□ -1.02
VPS16-208ENST00000487461 PYDC2Q56P42 97 aa8.71□□□□□ -1.02
VPS16-208ENST00000487461 FAM78BQ5VT40 261 aa8.71□□□□□ -1.02
VPS16-208ENST00000487461 OR8I2Q8N0Y5 310 aa8.71□□□□□ -1.02
VPS16-208ENST00000487461 COQ8AQ8NI60 647 aa8.71□□□□□ -1.02
VPS16-208ENST00000487461 TRIM63Q969Q1 353 aa8.71□□□□□ -1.02
VPS16-208ENST00000487461 C20orf173Q96LM9 149 aa8.71□□□□□ -1.02
VPS16-208ENST00000487461 SDHCQ99643 169 aaPredicted RBP8.71□□□□□ -1.02
VPS16-208ENST00000487461 NDUFAF3Q9BU61 184 aa8.71□□□□□ -1.02
VPS16-208ENST00000487461 SLC35B3Q9H1N7 401 aa8.71□□□□□ -1.02
VPS16-208ENST00000487461 RFNGQ9Y644 331 aa8.71□□□□□ -1.02
VPS16-208ENST00000487461 PIGBOS1A0A0B4J2F0 54 aa8.7□□□□□ -1.02
VPS16-208ENST00000487461 TMEM189A5PLL7 270 aa8.7□□□□□ -1.02
VPS16-208ENST00000487461 PRSS46E5RG02 174 aa8.7□□□□□ -1.02
VPS16-208ENST00000487461 ISLRO14498 428 aa8.7□□□□□ -1.02
VPS16-208ENST00000487461 MED6O75586 246 aa8.7□□□□□ -1.02
VPS16-208ENST00000487461 SFT2D2O95562 160 aa8.7□□□□□ -1.02
VPS16-208ENST00000487461 P0DMU3 169 aa8.7□□□□□ -1.02
VPS16-208ENST00000487461 FAM231AP0DMU4 169 aa8.7□□□□□ -1.02
VPS16-208ENST00000487461 FAM231CP0DMU5 169 aa8.7□□□□□ -1.02
VPS16-208ENST00000487461 VAMP1P23763 118 aa8.7□□□□□ -1.02
VPS16-208ENST00000487461 FAUP35544 74 aaKnown RBP8.7□□□□□ -1.02
VPS16-208ENST00000487461 PAX9P55771 341 aa8.7□□□□□ -1.02
VPS16-208ENST00000487461 SPATA31B1PQ5VZV4 182 aa8.7□□□□□ -1.02
VPS16-208ENST00000487461 EBLN2Q6P2I7 272 aa8.7□□□□□ -1.02
VPS16-208ENST00000487461 TMEM182Q6ZP80 229 aaPredicted RBP8.7□□□□□ -1.02
VPS16-208ENST00000487461 C1orf158Q8N1D5 194 aa8.7□□□□□ -1.02
VPS16-208ENST00000487461 TOMM5Q8N4H5 51 aa8.7□□□□□ -1.02
VPS16-208ENST00000487461 RSG1Q9BU20 258 aa8.7□□□□□ -1.02
VPS16-208ENST00000487461 MAGT1Q9H0U3 335 aa8.7□□□□□ -1.02
VPS16-208ENST00000487461 DKK2Q9UBU2 259 aa8.7□□□□□ -1.02
VPS16-208ENST00000487461 V9GYH0 126 aa8.7□□□□□ -1.02
VPS16-208ENST00000487461 A0A0J9YX75 114 aa8.69□□□□□ -1.02
VPS16-208ENST00000487461 BOLA2-SMG1P6H3BVE0 249 aa8.69□□□□□ -1.02
VPS16-208ENST00000487461 M0R2N4 97 aa8.69□□□□□ -1.02
VPS16-208ENST00000487461 WRBO00258 174 aa8.69□□□□□ -1.02
VPS16-208ENST00000487461 SYNGR2O43760 224 aa8.69□□□□□ -1.02
VPS16-208ENST00000487461 GATA2P23769 480 aaPredicted RBP8.69□□□□□ -1.02
VPS16-208ENST00000487461 AP3S2P59780 193 aa8.69□□□□□ -1.02
VPS16-208ENST00000487461 PPP1R1AQ13522 171 aa8.69□□□□□ -1.02
VPS16-208ENST00000487461 FAM222AQ5U5X8 452 aa8.69□□□□□ -1.02
VPS16-208ENST00000487461 GGNBP1Q5YKI7 109 aa8.69□□□□□ -1.02
VPS16-208ENST00000487461 LINC00336Q6ZUF6 198 aa8.69□□□□□ -1.02
VPS16-208ENST00000487461 C16orf92Q96LL3 132 aa8.69□□□□□ -1.02
VPS16-208ENST00000487461 SLC25A21Q9BQT8 299 aaPredicted RBP8.69□□□□□ -1.02
VPS16-208ENST00000487461 SRRQ9GZT4 340 aa8.69□□□□□ -1.02
VPS16-208ENST00000487461 SLC25A32Q9H2D1 315 aa8.69□□□□□ -1.02
VPS16-208ENST00000487461 TMED3Q9Y3Q3 217 aa8.69□□□□□ -1.02
VPS16-208ENST00000487461 A0A1B0GVY2 172 aa8.68□□□□□ -1.02
VPS16-208ENST00000487461 ZNF98A6NK75 572 aa8.68□□□□□ -1.02
VPS16-208ENST00000487461 CFDP00746 253 aaPredicted RBP8.68□□□□□ -1.02
VPS16-208ENST00000487461 HOXB5P09067 269 aa8.68□□□□□ -1.02
VPS16-208ENST00000487461 ORM2P19652 201 aa8.68□□□□□ -1.02
VPS16-208ENST00000487461 RPP30P78346 268 aaKnown RBP8.68□□□□□ -1.02
VPS16-208ENST00000487461 ASAH1Q13510 395 aa8.68□□□□□ -1.02
VPS16-208ENST00000487461 SPANXN5Q5MJ07 72 aa8.68□□□□□ -1.02
VPS16-208ENST00000487461 CIB3Q96Q77 187 aaPredicted RBP8.68□□□□□ -1.02
VPS16-208ENST00000487461 NIPSNAP3BQ9BS92 247 aa8.68□□□□□ -1.02
VPS16-208ENST00000487461 SLC25A22Q9H936 323 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms