RNA–Protein interactions for RNA: ENST00000487428.1

PTPRE-209, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-209ENST00000487428 PFDN5Q99471 154 aa4.99□□□□□ -1.61
PTPRE-209ENST00000487428 MGST2Q99735 147 aa4.99□□□□□ -1.61
PTPRE-209ENST00000487428 ATP5SQ99766 215 aa4.99□□□□□ -1.61
PTPRE-209ENST00000487428 C20orf24Q9BUV8 137 aa4.99□□□□□ -1.61
PTPRE-209ENST00000487428 GGTLC1Q9BX51 225 aa4.99□□□□□ -1.61
PTPRE-209ENST00000487428 C19orf73Q9NVV2 129 aa4.99□□□□□ -1.61
PTPRE-209ENST00000487428 PAIP2BQ9ULR5 123 aaKnown RBP4.99□□□□□ -1.61
PTPRE-209ENST00000487428 TNFSF18Q9UNG2 199 aa4.99□□□□□ -1.61
PTPRE-209ENST00000487428 TIMM9Q9Y5J7 89 aa4.99□□□□□ -1.61
PTPRE-209ENST00000487428 A0A087X0K7 114 aa4.98□□□□□ -1.61
PTPRE-209ENST00000487428 RNF222A6NCQ9 220 aa4.98□□□□□ -1.61
PTPRE-209ENST00000487428 IZUMO1RA6ND01 250 aa4.98□□□□□ -1.61
PTPRE-209ENST00000487428 H3BRN7 92 aa4.98□□□□□ -1.61
PTPRE-209ENST00000487428 K7EQG2 157 aa4.98□□□□□ -1.61
PTPRE-209ENST00000487428 TAAR5O14804 337 aa4.98□□□□□ -1.61
PTPRE-209ENST00000487428 LINC00869P0C866 280 aa4.98□□□□□ -1.61
PTPRE-209ENST00000487428 CAMLGP49069 296 aa4.98□□□□□ -1.61
PTPRE-209ENST00000487428 PAFAH1B2P68402 229 aa4.98□□□□□ -1.61
PTPRE-209ENST00000487428 DEFA6Q01524 100 aa4.98□□□□□ -1.61
PTPRE-209ENST00000487428 ZNF266Q14584 549 aa4.98□□□□□ -1.61
PTPRE-209ENST00000487428 LRRC37A5PQ49AS3 106 aa4.98□□□□□ -1.61
PTPRE-209ENST00000487428 Q6ZRG5 221 aa4.98□□□□□ -1.61
PTPRE-209ENST00000487428 TCTE3Q8IZS6 198 aa4.98□□□□□ -1.61
PTPRE-209ENST00000487428 TMEM217Q8N7C4 229 aa4.98□□□□□ -1.61
PTPRE-209ENST00000487428 STPG3Q8N7X2 389 aa4.98□□□□□ -1.61
PTPRE-209ENST00000487428 OR2T35Q8NGX2 323 aa4.98□□□□□ -1.61
PTPRE-209ENST00000487428 ST8SIA2Q92186 375 aa4.98□□□□□ -1.61
PTPRE-209ENST00000487428 CLUHP3Q96NS8 147 aa4.98□□□□□ -1.61
PTPRE-209ENST00000487428 RNF2Q99496 336 aa4.98□□□□□ -1.61
PTPRE-209ENST00000487428 SHANK2-AS3Q9BTD1 123 aa4.98□□□□□ -1.61
PTPRE-209ENST00000487428 NPCDR1Q9BY65 106 aa4.98□□□□□ -1.61
PTPRE-209ENST00000487428 WDR61Q9GZS3 305 aaKnown RBP4.98□□□□□ -1.61
PTPRE-209ENST00000487428 SMAD5-AS1Q9Y6J3 95 aa4.98□□□□□ -1.61
PTPRE-209ENST00000487428 STAB2Q8WWQ8 2551 aa4.97□□□□□ -1.61
PTPRE-209ENST00000487428 ZNF98A6NK75 572 aa4.97□□□□□ -1.61
PTPRE-209ENST00000487428 C17orf112F2Z3M2 114 aa4.97□□□□□ -1.61
PTPRE-209ENST00000487428 ZNF253O75346 499 aa4.97□□□□□ -1.61
PTPRE-209ENST00000487428 HYPMO75409 117 aa4.97□□□□□ -1.61
PTPRE-209ENST00000487428 APOHP02749 345 aaPredicted RBP4.97□□□□□ -1.61
PTPRE-209ENST00000487428 RPL7P18124 248 aaKnown RBP4.97□□□□□ -1.61
PTPRE-209ENST00000487428 CXCL2P19875 107 aa4.97□□□□□ -1.61
PTPRE-209ENST00000487428 EDN2P20800 178 aa4.97□□□□□ -1.61
PTPRE-209ENST00000487428 SERF2P84101 59 aa4.97□□□□□ -1.61
PTPRE-209ENST00000487428 OR2F1Q13607 317 aa4.97□□□□□ -1.61
PTPRE-209ENST00000487428 PATE2Q6UY27 113 aa4.97□□□□□ -1.61
PTPRE-209ENST00000487428 SIGLEC15Q6ZMC9 328 aa4.97□□□□□ -1.61
PTPRE-209ENST00000487428 TMEM182Q6ZP80 229 aaPredicted RBP4.97□□□□□ -1.61
PTPRE-209ENST00000487428 TCF24Q7RTU0 167 aa4.97□□□□□ -1.61
PTPRE-209ENST00000487428 INO80EQ8NBZ0 244 aaPredicted RBP4.97□□□□□ -1.61
PTPRE-209ENST00000487428 OR1L4Q8NGR5 311 aa4.97□□□□□ -1.61
PTPRE-209ENST00000487428 OR1B1Q8NGR6 318 aa4.97□□□□□ -1.61
PTPRE-209ENST00000487428 OR2G3Q8NGZ4 309 aa4.97□□□□□ -1.61
PTPRE-209ENST00000487428 B9D2Q9BPU9 175 aa4.97□□□□□ -1.61
PTPRE-209ENST00000487428 PSMG3Q9BT73 122 aaPredicted RBP4.97□□□□□ -1.61
PTPRE-209ENST00000487428 SLC25A39Q9BZJ4 359 aaPredicted RBP4.97□□□□□ -1.61
PTPRE-209ENST00000487428 DNAJC4Q9NNZ3 241 aa4.97□□□□□ -1.61
PTPRE-209ENST00000487428 NRN1Q9NPD7 142 aa4.97□□□□□ -1.61
PTPRE-209ENST00000487428 SLC39A9Q9NUM3 307 aa4.97□□□□□ -1.61
PTPRE-209ENST00000487428 CLEC5AQ9NY25 188 aa4.97□□□□□ -1.61
PTPRE-209ENST00000487428 HIGD1AQ9Y241 93 aa4.97□□□□□ -1.61
PTPRE-209ENST00000487428 KIR2DL5BA0A0G2JN68 375 aa4.96□□□□□ -1.62
PTPRE-209ENST00000487428 KIR2DL5BA0A0G2JPC4 375 aa4.96□□□□□ -1.62
PTPRE-209ENST00000487428 UBE2L5PA0A1B0GUS4 154 aa4.96□□□□□ -1.62
PTPRE-209ENST00000487428 SMCO3A2RU48 225 aa4.96□□□□□ -1.62
PTPRE-209ENST00000487428 ISLRO14498 428 aa4.96□□□□□ -1.62
PTPRE-209ENST00000487428 SOCS3O14543 225 aa4.96□□□□□ -1.62
PTPRE-209ENST00000487428 MRPS12O15235 138 aaKnown RBP4.96□□□□□ -1.62
PTPRE-209ENST00000487428 JTBO76095 146 aa4.96□□□□□ -1.62
PTPRE-209ENST00000487428 IFNA5P01569 189 aa4.96□□□□□ -1.62
PTPRE-209ENST00000487428 OR5G3P0C626 314 aa4.96□□□□□ -1.62
PTPRE-209ENST00000487428 NHLRC4P0CG21 123 aaPredicted RBP4.96□□□□□ -1.62
PTPRE-209ENST00000487428 GALR1P47211 349 aa4.96□□□□□ -1.62
PTPRE-209ENST00000487428 LYZP61626 148 aa4.96□□□□□ -1.62
PTPRE-209ENST00000487428 B2MP61769 119 aa4.96□□□□□ -1.62
PTPRE-209ENST00000487428 ODF3L2Q3SX64 289 aa4.96□□□□□ -1.62
PTPRE-209ENST00000487428 Q5BKY6 102 aa4.96□□□□□ -1.62
PTPRE-209ENST00000487428 SPATA31B1PQ5VZV4 182 aa4.96□□□□□ -1.62
PTPRE-209ENST00000487428 KIR2DL5AQ8N109 375 aa4.96□□□□□ -1.62
PTPRE-209ENST00000487428 KIR2DL5BQ8NHK3 375 aa4.96□□□□□ -1.62
PTPRE-209ENST00000487428 TMEM37Q8WXS4 190 aa4.96□□□□□ -1.62
PTPRE-209ENST00000487428 ST6GAL2Q96JF0 529 aa4.96□□□□□ -1.62
PTPRE-209ENST00000487428 MRPL32Q9BYC8 188 aaKnown RBP4.96□□□□□ -1.62
PTPRE-209ENST00000487428 ARV1Q9H2C2 271 aa4.96□□□□□ -1.62
PTPRE-209ENST00000487428 MS4A6AQ9H2W1 248 aa4.96□□□□□ -1.62
PTPRE-209ENST00000487428 TMEM14CQ9P0S9 112 aa4.96□□□□□ -1.62
PTPRE-209ENST00000487428 PXMP4Q9Y6I8 212 aa4.96□□□□□ -1.62
PTPRE-209ENST00000487428 TGP01266 2768 aa4.96□□□□□ -1.62
PTPRE-209ENST00000487428 COL7A1Q02388 2944 aa4.96□□□□□ -1.62
PTPRE-209ENST00000487428 IGHV3OR16-8A0A075B7F1 116 aa4.95□□□□□ -1.62
PTPRE-209ENST00000487428 A0A0D9SG52 128 aa4.95□□□□□ -1.62
PTPRE-209ENST00000487428 A8MTW9 85 aa4.95□□□□□ -1.62
PTPRE-209ENST00000487428 UBE2CO00762 179 aa4.95□□□□□ -1.62
PTPRE-209ENST00000487428 ZNF207O43670 478 aaKnown RBP4.95□□□□□ -1.62
PTPRE-209ENST00000487428 IGHV4-30-4P0DP06 118 aa4.95□□□□□ -1.62
PTPRE-209ENST00000487428 FGF7P21781 194 aa4.95□□□□□ -1.62
PTPRE-209ENST00000487428 GATA2P23769 480 aaPredicted RBP4.95□□□□□ -1.62
PTPRE-209ENST00000487428 PSMB3P49720 205 aa4.95□□□□□ -1.62
PTPRE-209ENST00000487428 CD81P60033 236 aa4.95□□□□□ -1.62
PTPRE-209ENST00000487428 PDE6HQ13956 83 aa4.95□□□□□ -1.62
PTPRE-209ENST00000487428 GUK1Q16774 197 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms