RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 CXCL2P19875 107 aa2.42□□□□□ -2.02
PRPF38A-203ENST00000487160 CXCL3P19876 107 aa2.42□□□□□ -2.02
PRPF38A-203ENST00000487160 FKBP2P26885 142 aaKnown RBP2.42□□□□□ -2.02
PRPF38A-203ENST00000487160 RCVRNP35243 200 aa2.42□□□□□ -2.02
PRPF38A-203ENST00000487160 POLR2HP52434 150 aaKnown RBP2.42□□□□□ -2.02
PRPF38A-203ENST00000487160 MAPK14Q16539 360 aa2.42□□□□□ -2.02
PRPF38A-203ENST00000487160 TMEM155Q4W5P6 130 aa2.42□□□□□ -2.02
PRPF38A-203ENST00000487160 LRRC28Q86X40 367 aaPredicted RBP2.42□□□□□ -2.02
PRPF38A-203ENST00000487160 C10orf67Q8IYJ2 551 aa2.42□□□□□ -2.02
PRPF38A-203ENST00000487160 SLC30A7Q8NEW0 376 aa2.42□□□□□ -2.02
PRPF38A-203ENST00000487160 GPR32P1Q8NGA4 272 aa2.42□□□□□ -2.02
PRPF38A-203ENST00000487160 OR5D18Q8NGL1 313 aa2.42□□□□□ -2.02
PRPF38A-203ENST00000487160 OR9I1Q8NGQ6 314 aa2.42□□□□□ -2.02
PRPF38A-203ENST00000487160 TNFAIP8L1Q8WVP5 186 aa2.42□□□□□ -2.02
PRPF38A-203ENST00000487160 C11orf40Q8WZ69 217 aa2.42□□□□□ -2.02
PRPF38A-203ENST00000487160 SDF2Q99470 211 aa2.42□□□□□ -2.02
PRPF38A-203ENST00000487160 CENPHQ9H3R5 247 aa2.42□□□□□ -2.02
PRPF38A-203ENST00000487160 MAP1LC3AQ9H492 121 aa2.42□□□□□ -2.02
PRPF38A-203ENST00000487160 HRASLSQ9HDD0 168 aa2.42□□□□□ -2.02
PRPF38A-203ENST00000487160 RPUSD1Q9UJJ7 312 aaKnown RBP2.42□□□□□ -2.02
PRPF38A-203ENST00000487160 VPREB3Q9UKI3 123 aa2.42□□□□□ -2.02
PRPF38A-203ENST00000487160 SLC35A3Q9Y2D2 325 aa2.42□□□□□ -2.02
PRPF38A-203ENST00000487160 STARD9Q9P2P6 4700 aa2.42□□□□□ -2.02
PRPF38A-203ENST00000487160 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 UBL3O95164 117 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 LTAP01374 205 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 IGHV1-69P01742 117 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 OPN1SWP03999 348 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 ATP5G1P05496 136 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 RBP1P09455 135 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 OR12D1P0DN82 309 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 CDKN2CP42773 168 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 INPP1P49441 399 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 DR1Q01658 176 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 FADDQ13158 208 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 DHRS2Q13268 280 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 C1DQ13901 141 aaKnown RBP2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 MMDQ15546 238 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 UAP1Q16222 522 aaPredicted RBP2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 MOGQ16653 247 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 ARHGAP11BQ3KRB8 267 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 C1orf140Q5VVS0 124 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 CD200R1LQ6Q8B3 271 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 C3orf62Q6ZUJ4 267 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 PDZD9Q8IXQ8 264 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 HS3ST5Q8IZT8 346 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 ZNF283Q8N7M2 679 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 TMEM75Q8N9X5 138 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 CMTM2Q8TAZ6 248 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 DTD1Q8TEA8 209 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 CMBLQ96DG6 245 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 SLC25A44Q96H78 314 aaPredicted RBP2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 MROQ9BYG7 248 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 BCL2L14Q9BZR8 327 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 ALX4Q9H161 411 aaPredicted RBP2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 TMEM106BQ9NUM4 274 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 ALG5Q9Y673 324 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 HERC2O95714 4834 aa2.41□□□□□ -2.02
PRPF38A-203ENST00000487160 IGKV1D-37A0A075B6S9 117 aa2.4□□□□□ -2.03
PRPF38A-203ENST00000487160 SYNGR2O43760 224 aa2.4□□□□□ -2.03
PRPF38A-203ENST00000487160 ARL6IP5O75915 188 aa2.4□□□□□ -2.03
PRPF38A-203ENST00000487160 TFPTP0C1Z6 253 aa2.4□□□□□ -2.03
PRPF38A-203ENST00000487160 RPL38P63173 70 aaKnown RBP2.4□□□□□ -2.03
PRPF38A-203ENST00000487160 SLC35A2P78381 396 aa2.4□□□□□ -2.03
PRPF38A-203ENST00000487160 MRPS15P82914 257 aaKnown RBP2.4□□□□□ -2.03
PRPF38A-203ENST00000487160 TNFAIP6P98066 277 aaPredicted RBP2.4□□□□□ -2.03
PRPF38A-203ENST00000487160 EMX1Q04741 257 aaPredicted RBP2.4□□□□□ -2.03
PRPF38A-203ENST00000487160 TCF23Q7RTU1 214 aa2.4□□□□□ -2.03
PRPF38A-203ENST00000487160 LYZL2Q7Z4W2 148 aa2.4□□□□□ -2.03
PRPF38A-203ENST00000487160 NDUFA11Q86Y39 141 aa2.4□□□□□ -2.03
PRPF38A-203ENST00000487160 C20orf196Q8IYI0 205 aa2.4□□□□□ -2.03
PRPF38A-203ENST00000487160 SLC22A24Q8N4F4 322 aa2.4□□□□□ -2.03
PRPF38A-203ENST00000487160 KRTCAP2Q8N6L1 136 aa2.4□□□□□ -2.03
PRPF38A-203ENST00000487160 WFDC9Q8NEX5 89 aa2.4□□□□□ -2.03
PRPF38A-203ENST00000487160 OR8B3Q8NGG8 313 aa2.4□□□□□ -2.03
PRPF38A-203ENST00000487160 SLC25A40Q8TBP6 338 aa2.4□□□□□ -2.03
PRPF38A-203ENST00000487160 SLC35G5Q96KT7 338 aa2.4□□□□□ -2.03
PRPF38A-203ENST00000487160 OR8B2Q96RD0 313 aa2.4□□□□□ -2.03
PRPF38A-203ENST00000487160 MRPL57Q9BQC6 102 aaKnown RBP2.4□□□□□ -2.03
PRPF38A-203ENST00000487160 OR2J1Q9GZK6 312 aa2.4□□□□□ -2.03
PRPF38A-203ENST00000487160 KCNIP2Q9NS61 270 aa2.4□□□□□ -2.03
PRPF38A-203ENST00000487160 FGFR1OP2Q9NVK5 253 aa2.4□□□□□ -2.03
PRPF38A-203ENST00000487160 RYR1P21817 5038 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 TRBV24-1A0A075B6N3 115 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 IGKV1-12A0A0C4DH73 117 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 H3BUX3 64 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 FAAHO00519 579 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 SSNA1O43805 119 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 IGKV1D-12P01611 117 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 ISG15P05161 165 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 GUSBP08236 651 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 FBP1P09467 338 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 CTXN2P0C2S0 81 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 NQO1P15559 274 aaKnown RBP2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 RPL12P30050 165 aaKnown RBP2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 MAGEA12P43365 314 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 H2BFSP57053 126 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 LINC00313P59037 77 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 CXCR4P61073 352 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 HBA1P69905 142 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms