RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 MS4A6AQ9H2W1 248 aa10.96□□□□□ -0.65
LIMS3-205ENST00000487150 C19orf73Q9NVV2 129 aa10.96□□□□□ -0.65
LIMS3-205ENST00000487150 HYPMO75409 117 aa10.95□□□□□ -0.66
LIMS3-205ENST00000487150 APOHP02749 345 aaPredicted RBP10.95□□□□□ -0.66
LIMS3-205ENST00000487150 GIPP09681 153 aaPredicted RBP10.95□□□□□ -0.66
LIMS3-205ENST00000487150 PLP1P60201 277 aa10.95□□□□□ -0.66
LIMS3-205ENST00000487150 EWSR1Q01844 656 aaKnown RBP eCLIP10.95□□□□□ -0.66
LIMS3-205ENST00000487150 ARL16Q0P5N6 197 aa10.95□□□□□ -0.66
LIMS3-205ENST00000487150 STPG3Q8N7X2 389 aa10.95□□□□□ -0.66
LIMS3-205ENST00000487150 STXBP6Q8NFX7 210 aa10.95□□□□□ -0.66
LIMS3-205ENST00000487150 OR1B1Q8NGR6 318 aa10.95□□□□□ -0.66
LIMS3-205ENST00000487150 SRD5A3Q9H8P0 318 aa10.95□□□□□ -0.66
LIMS3-205ENST00000487150 SEPSECSQ9HD40 501 aaKnown RBP10.95□□□□□ -0.66
LIMS3-205ENST00000487150 OR5AC2Q9NZP5 309 aa10.95□□□□□ -0.66
LIMS3-205ENST00000487150 HIGD1AQ9Y241 93 aa10.95□□□□□ -0.66
LIMS3-205ENST00000487150 WDR83OSQ9Y284 106 aa10.95□□□□□ -0.66
LIMS3-205ENST00000487150 IGKV3-7A0A075B6H7 116 aa10.94□□□□□ -0.66
LIMS3-205ENST00000487150 ELOA3CA0A087WX78 387 aaPredicted RBP10.94□□□□□ -0.66
LIMS3-205ENST00000487150 UBE2L5PA0A1B0GUS4 154 aa10.94□□□□□ -0.66
LIMS3-205ENST00000487150 AGPAT2O15120 278 aa10.94□□□□□ -0.66
LIMS3-205ENST00000487150 ORM2P19652 201 aa10.94□□□□□ -0.66
LIMS3-205ENST00000487150 GALR1P47211 349 aa10.94□□□□□ -0.66
LIMS3-205ENST00000487150 CAMLGP49069 296 aa10.94□□□□□ -0.66
LIMS3-205ENST00000487150 MEOX2P50222 304 aa10.94□□□□□ -0.66
LIMS3-205ENST00000487150 SNRPD3P62318 126 aaKnown RBP10.94□□□□□ -0.66
LIMS3-205ENST00000487150 Q6ZRG5 221 aa10.94□□□□□ -0.66
LIMS3-205ENST00000487150 OR8I2Q8N0Y5 310 aa10.94□□□□□ -0.66
LIMS3-205ENST00000487150 ZMAT4Q9H898 229 aa10.94□□□□□ -0.66
LIMS3-205ENST00000487150 NRN1Q9NPD7 142 aa10.94□□□□□ -0.66
LIMS3-205ENST00000487150 MBD2Q9UBB5 411 aa10.94□□□□□ -0.66
LIMS3-205ENST00000487150 SELENOKQ9Y6D0 94 aa10.94□□□□□ -0.66
LIMS3-205ENST00000487150 TFPI2P48307 235 aa10.93□□□□□ -0.66
LIMS3-205ENST00000487150 FCN2Q15485 313 aa10.93□□□□□ -0.66
LIMS3-205ENST00000487150 GBGT1Q8N5D6 347 aa10.93□□□□□ -0.66
LIMS3-205ENST00000487150 DEFB125Q8N687 156 aa10.93□□□□□ -0.66
LIMS3-205ENST00000487150 OR5C1Q8NGR4 320 aa10.93□□□□□ -0.66
LIMS3-205ENST00000487150 CHAC2Q8WUX2 184 aa10.93□□□□□ -0.66
LIMS3-205ENST00000487150 H0YIZ8 118 aa10.92□□□□□ -0.66
LIMS3-205ENST00000487150 COX7A2P2O60397 106 aa10.92□□□□□ -0.66
LIMS3-205ENST00000487150 OR5G3P0C626 314 aa10.92□□□□□ -0.66
LIMS3-205ENST00000487150 LYL1P12980 280 aa10.92□□□□□ -0.66
LIMS3-205ENST00000487150 RPL7P18124 248 aaKnown RBP10.92□□□□□ -0.66
LIMS3-205ENST00000487150 CXCL3P19876 107 aa10.92□□□□□ -0.66
LIMS3-205ENST00000487150 APOC4P55056 127 aa10.92□□□□□ -0.66
LIMS3-205ENST00000487150 ODF3L2Q3SX64 289 aa10.92□□□□□ -0.66
LIMS3-205ENST00000487150 ZNF709Q8N972 641 aa10.92□□□□□ -0.66
LIMS3-205ENST00000487150 OR11H7Q8NGC8 314 aa10.92□□□□□ -0.66
LIMS3-205ENST00000487150 OR1L4Q8NGR5 311 aa10.92□□□□□ -0.66
LIMS3-205ENST00000487150 PFDN5Q99471 154 aa10.92□□□□□ -0.66
LIMS3-205ENST00000487150 MGST2Q99735 147 aa10.92□□□□□ -0.66
LIMS3-205ENST00000487150 GGTLC1Q9BX51 225 aa10.92□□□□□ -0.66
LIMS3-205ENST00000487150 LOC102724200A0A096LPH7 203 aaPredicted RBP10.91□□□□□ -0.66
LIMS3-205ENST00000487150 ZNF98A6NK75 572 aa10.91□□□□□ -0.66
LIMS3-205ENST00000487150 H3BRN7 92 aa10.91□□□□□ -0.66
LIMS3-205ENST00000487150 K7EQG2 157 aa10.91□□□□□ -0.66
LIMS3-205ENST00000487150 FGF7P21781 194 aa10.91□□□□□ -0.66
LIMS3-205ENST00000487150 RPL12P30050 165 aaKnown RBP10.91□□□□□ -0.66
LIMS3-205ENST00000487150 ID1P41134 155 aa10.91□□□□□ -0.66
LIMS3-205ENST00000487150 RPL29P47914 159 aaKnown RBP10.91□□□□□ -0.66
LIMS3-205ENST00000487150 WFDC3Q8IUB2 231 aa10.91□□□□□ -0.66
LIMS3-205ENST00000487150 DCANP1Q8TF63 244 aa10.91□□□□□ -0.66
LIMS3-205ENST00000487150 ATP5SQ99766 215 aa10.91□□□□□ -0.66
LIMS3-205ENST00000487150 SPATA25Q9BR10 227 aa10.91□□□□□ -0.66
LIMS3-205ENST00000487150 SHANK2-AS3Q9BTD1 123 aa10.91□□□□□ -0.66
LIMS3-205ENST00000487150 RNF126Q9BV68 326 aa10.91□□□□□ -0.66
LIMS3-205ENST00000487150 SLC25A39Q9BZJ4 359 aaPredicted RBP10.91□□□□□ -0.66
LIMS3-205ENST00000487150 ARL6Q9H0F7 186 aa10.91□□□□□ -0.66
LIMS3-205ENST00000487150 MAP6D1Q9H9H5 199 aa10.91□□□□□ -0.66
LIMS3-205ENST00000487150 HSPB11Q9Y547 144 aa10.91□□□□□ -0.66
LIMS3-205ENST00000487150 KIR2DL5BA0A0G2JN68 375 aa10.9□□□□□ -0.66
LIMS3-205ENST00000487150 KIR2DL5BA0A0G2JPC4 375 aa10.9□□□□□ -0.66
LIMS3-205ENST00000487150 C17orf112F2Z3M2 114 aa10.9□□□□□ -0.66
LIMS3-205ENST00000487150 IFNA5P01569 189 aa10.9□□□□□ -0.66
LIMS3-205ENST00000487150 GATA2P23769 480 aaPredicted RBP10.9□□□□□ -0.66
LIMS3-205ENST00000487150 B2MP61769 119 aa10.9□□□□□ -0.66
LIMS3-205ENST00000487150 NHLH2Q02577 135 aa10.9□□□□□ -0.66
LIMS3-205ENST00000487150 CLINT1Q14677 625 aa10.9□□□□□ -0.66
LIMS3-205ENST00000487150 KIR2DL5AQ8N109 375 aa10.9□□□□□ -0.66
LIMS3-205ENST00000487150 KIR2DL5BQ8NHK3 375 aa10.9□□□□□ -0.66
LIMS3-205ENST00000487150 WFDC10AQ9H1F0 79 aa10.9□□□□□ -0.66
LIMS3-205ENST00000487150 ARV1Q9H2C2 271 aa10.9□□□□□ -0.66
LIMS3-205ENST00000487150 SLC25A22Q9H936 323 aa10.9□□□□□ -0.66
LIMS3-205ENST00000487150 DOK5Q9P104 306 aa10.9□□□□□ -0.66
LIMS3-205ENST00000487150 UBQLN2Q9UHD9 624 aa10.9□□□□□ -0.66
LIMS3-205ENST00000487150 UBE2CO00762 179 aa10.89□□□□□ -0.67
LIMS3-205ENST00000487150 PSMB3P49720 205 aa10.89□□□□□ -0.67
LIMS3-205ENST00000487150 PRR20EP86478 221 aa10.89□□□□□ -0.67
LIMS3-205ENST00000487150 PRR20CP86479 221 aa10.89□□□□□ -0.67
LIMS3-205ENST00000487150 PRR20DP86480 221 aa10.89□□□□□ -0.67
LIMS3-205ENST00000487150 PRR20BP86481 221 aa10.89□□□□□ -0.67
LIMS3-205ENST00000487150 PRR20AP86496 221 aa10.89□□□□□ -0.67
LIMS3-205ENST00000487150 OPCMLQ14982 345 aa10.89□□□□□ -0.67
LIMS3-205ENST00000487150 C10orf113Q5VZT2 155 aa10.89□□□□□ -0.67
LIMS3-205ENST00000487150 SBSPONQ8IVN8 264 aa10.89□□□□□ -0.67
LIMS3-205ENST00000487150 TM2D3Q9BRN9 247 aa10.89□□□□□ -0.67
LIMS3-205ENST00000487150 NPCDR1Q9BY65 106 aa10.89□□□□□ -0.67
LIMS3-205ENST00000487150 SLC39A9Q9NUM3 307 aa10.89□□□□□ -0.67
LIMS3-205ENST00000487150 ISLRO14498 428 aa10.88□□□□□ -0.67
LIMS3-205ENST00000487150 ZNF688P0C7X2 276 aa10.88□□□□□ -0.67
LIMS3-205ENST00000487150 ATF4P18848 351 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms