RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 EDDM3BP56851 147 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 RPS25P62851 125 aaKnown RBP5.26□□□□□ -1.57
HDAC3-209ENST00000486618 MEF2CQ06413 473 aaPredicted RBP5.26□□□□□ -1.57
HDAC3-209ENST00000486618 GAGE4Q13068 117 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 ZNF684Q5T5D7 378 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 FAAP20Q6NZ36 180 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 PRSS54Q6PEW0 395 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 C10orf99Q6UWK7 81 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 KLHL30-AS1Q8NEE0 82 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 OR1N2Q8NGR9 330 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 OR2G2Q8NGZ5 317 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 ZNRF4Q8WWF5 429 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 SLC35E1Q96K37 410 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 LINC00477Q96M19 166 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 LINC00052Q96N35 136 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 ZNF714Q96N38 554 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 MGLLQ99685 303 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 CLEC7AQ9BXN2 247 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 FGF23Q9GZV9 251 aaPredicted RBP5.26□□□□□ -1.57
HDAC3-209ENST00000486618 DPM3Q9P2X0 92 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 SMAD5-AS1Q9Y6J3 95 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 IGHV2-26A0A0B4J1V2 119 aa5.25□□□□□ -1.57
HDAC3-209ENST00000486618 TMEM269A0A1B0GVZ9 245 aa5.25□□□□□ -1.57
HDAC3-209ENST00000486618 hADV38S2A0JD32 116 aa5.25□□□□□ -1.57
HDAC3-209ENST00000486618 SMKR1H3BMG3 65 aa5.25□□□□□ -1.57
HDAC3-209ENST00000486618 AIPO00170 330 aa5.25□□□□□ -1.57
HDAC3-209ENST00000486618 ALPLP05186 524 aa5.25□□□□□ -1.57
HDAC3-209ENST00000486618 BCL3P20749 454 aa5.25□□□□□ -1.57
HDAC3-209ENST00000486618 MOB1BQ7L9L4 216 aa5.25□□□□□ -1.57
HDAC3-209ENST00000486618 TRAPPC6BQ86SZ2 158 aa5.25□□□□□ -1.57
HDAC3-209ENST00000486618 ZNF329Q86UD4 541 aa5.25□□□□□ -1.57
HDAC3-209ENST00000486618 ZNF695Q8IW36 515 aa5.25□□□□□ -1.57
HDAC3-209ENST00000486618 OR1S1Q8NH92 325 aa5.25□□□□□ -1.57
HDAC3-209ENST00000486618 LYZL4Q96KX0 146 aa5.25□□□□□ -1.57
HDAC3-209ENST00000486618 ANAPC13Q9BS18 74 aa5.25□□□□□ -1.57
HDAC3-209ENST00000486618 TMEM133Q9H2Q1 129 aa5.25□□□□□ -1.57
HDAC3-209ENST00000486618 ZNF256Q9Y2P7 627 aaPredicted RBP5.25□□□□□ -1.57
HDAC3-209ENST00000486618 TMEM14AQ9Y6G1 99 aa5.25□□□□□ -1.57
HDAC3-209ENST00000486618 J3QT63 122 aa5.24□□□□□ -1.57
HDAC3-209ENST00000486618 RHODO00212 210 aa5.24□□□□□ -1.57
HDAC3-209ENST00000486618 OR2H2O95918 312 aa5.24□□□□□ -1.57
HDAC3-209ENST00000486618 CD24P25063 80 aa5.24□□□□□ -1.57
HDAC3-209ENST00000486618 ATP6V0CP27449 155 aa5.24□□□□□ -1.57
HDAC3-209ENST00000486618 BLVRBP30043 206 aaPredicted RBP5.24□□□□□ -1.57
HDAC3-209ENST00000486618 DEFA1P59665 94 aa5.24□□□□□ -1.57
HDAC3-209ENST00000486618 DEFA3P59666 94 aa5.24□□□□□ -1.57
HDAC3-209ENST00000486618 EIF5AP63241 154 aaKnown RBP5.24□□□□□ -1.57
HDAC3-209ENST00000486618 BATFQ16520 125 aa5.24□□□□□ -1.57
HDAC3-209ENST00000486618 LINC01590Q5TEZ4 76 aa5.24□□□□□ -1.57
HDAC3-209ENST00000486618 RPL22L1Q6P5R6 122 aaKnown RBP5.24□□□□□ -1.57
HDAC3-209ENST00000486618 IL34Q6ZMJ4 242 aa5.24□□□□□ -1.57
HDAC3-209ENST00000486618 PPP1R27Q86WC6 154 aa5.24□□□□□ -1.57
HDAC3-209ENST00000486618 DEFB107AQ8IZN7 70 aa5.24□□□□□ -1.57
HDAC3-209ENST00000486618 SVBPQ8N300 66 aa5.24□□□□□ -1.57
HDAC3-209ENST00000486618 SAMD12Q8N8I0 201 aa5.24□□□□□ -1.57
HDAC3-209ENST00000486618 OR10G2Q8NGC3 310 aa5.24□□□□□ -1.57
HDAC3-209ENST00000486618 OR8B12Q8NGG6 310 aa5.24□□□□□ -1.57
HDAC3-209ENST00000486618 OR1L1Q8NH94 360 aa5.24□□□□□ -1.57
HDAC3-209ENST00000486618 UBE2E2Q96LR5 201 aa5.24□□□□□ -1.57
HDAC3-209ENST00000486618 KIR2DL4Q99706 377 aa5.24□□□□□ -1.57
HDAC3-209ENST00000486618 C1QTNF4Q9BXJ3 329 aa5.24□□□□□ -1.57
HDAC3-209ENST00000486618 SAMD10Q9BYL1 202 aa5.24□□□□□ -1.57
HDAC3-209ENST00000486618 ISG20L2Q9H9L3 353 aaKnown RBP5.24□□□□□ -1.57
HDAC3-209ENST00000486618 CMC2Q9NRP2 79 aa5.24□□□□□ -1.57
HDAC3-209ENST00000486618 C11orf21Q9P2W6 132 aa5.24□□□□□ -1.57
HDAC3-209ENST00000486618 PKIGQ9Y2B9 76 aa5.24□□□□□ -1.57
HDAC3-209ENST00000486618 LINC00312Q9Y6C7 94 aa5.24□□□□□ -1.57
HDAC3-209ENST00000486618 DYNC2H1Q8NCM8 4307 aaKnown RBP5.23□□□□□ -1.57
HDAC3-209ENST00000486618 TRBV5-7A0A0A0MS05 114 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 A0A1W2PP11 408 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 FAM183AA6NL82 134 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 OOSP1A8MZH6 123 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 FCN1O00602 326 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 NDUFC2O95298 119 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 FGF2P09038 288 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 FAM106CPP0CH98 169 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 HOXB6P17509 224 aaKnown RBP5.23□□□□□ -1.57
HDAC3-209ENST00000486618 RPL7P18124 248 aaKnown RBP5.23□□□□□ -1.57
HDAC3-209ENST00000486618 RCC1P18754 421 aaPredicted RBP5.23□□□□□ -1.57
HDAC3-209ENST00000486618 CNTFRP26992 372 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 INSL3P51460 131 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 PSG9Q00887 426 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 TIMM50Q3ZCQ8 353 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 TIGITQ495A1 244 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 FAM106AQ4KMX7 169 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 BCL2L15Q5TBC7 163 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 OR2T5Q6IEZ7 315 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 EIF5AL1Q6IS14 154 aaKnown RBP5.23□□□□□ -1.57
HDAC3-209ENST00000486618 C18orf65Q6ZTR6 163 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 SBSPONQ8IVN8 264 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 SLC35G3Q8N808 338 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 OR2T29Q8NH02 315 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 OTOSQ8NHW6 89 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 THAP6Q8TBB0 222 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 GPR146Q96CH1 333 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 PLEKHB2Q96CS7 222 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 GALNT14Q96FL9 552 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 ST6GAL2Q96JF0 529 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 HYLS1Q96M11 299 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 AMELYQ99218 206 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms