RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 VAMP2P63027 116 aa9.45□□□□□ -0.9
CHMP3-208ENST00000486404 C1orf194Q5T5A4 169 aa9.45□□□□□ -0.9
CHMP3-208ENST00000486404 LINC00299Q6ZSB3 139 aa9.45□□□□□ -0.9
CHMP3-208ENST00000486404 SMIM8Q96KF7 97 aa9.45□□□□□ -0.9
CHMP3-208ENST00000486404 TMEM147Q9BVK8 224 aa9.45□□□□□ -0.9
CHMP3-208ENST00000486404 SLC25A22Q9H936 323 aa9.45□□□□□ -0.9
CHMP3-208ENST00000486404 RYR3Q15413 4870 aa9.44□□□□□ -0.9
CHMP3-208ENST00000486404 C5orf51A6NDU8 294 aa9.44□□□□□ -0.9
CHMP3-208ENST00000486404 H2AFB2P0C5Z0 115 aa9.44□□□□□ -0.9
CHMP3-208ENST00000486404 METTL15P1P0C7V9 234 aa9.44□□□□□ -0.9
CHMP3-208ENST00000486404 ORM2P19652 201 aa9.44□□□□□ -0.9
CHMP3-208ENST00000486404 GALR1P47211 349 aa9.44□□□□□ -0.9
CHMP3-208ENST00000486404 PSMB3P49720 205 aa9.44□□□□□ -0.9
CHMP3-208ENST00000486404 NUTF2P61970 127 aaKnown RBP9.44□□□□□ -0.9
CHMP3-208ENST00000486404 SAMD13Q5VXD3 122 aa9.44□□□□□ -0.9
CHMP3-208ENST00000486404 OR1B1Q8NGR6 318 aa9.44□□□□□ -0.9
CHMP3-208ENST00000486404 ENKURQ8TC29 256 aa9.44□□□□□ -0.9
CHMP3-208ENST00000486404 ZNF431Q8TF32 576 aaPredicted RBP9.44□□□□□ -0.9
CHMP3-208ENST00000486404 SEC22CQ9BRL7 303 aa9.44□□□□□ -0.9
CHMP3-208ENST00000486404 WDR12Q9GZL7 423 aaKnown RBP9.44□□□□□ -0.9
CHMP3-208ENST00000486404 C11orf68Q9H3H3 251 aaKnown RBP9.44□□□□□ -0.9
CHMP3-208ENST00000486404 SEPSECSQ9HD40 501 aaKnown RBP9.44□□□□□ -0.9
CHMP3-208ENST00000486404 SLC45A2Q9UMX9 530 aa9.44□□□□□ -0.9
CHMP3-208ENST00000486404 TSC22D2O75157 780 aa9.43□□□□□ -0.9
CHMP3-208ENST00000486404 IL5P05113 134 aa9.43□□□□□ -0.9
CHMP3-208ENST00000486404 ATF4P18848 351 aaPredicted RBP9.43□□□□□ -0.9
CHMP3-208ENST00000486404 C4BPBP20851 252 aa9.43□□□□□ -0.9
CHMP3-208ENST00000486404 MEOX2P50222 304 aa9.43□□□□□ -0.9
CHMP3-208ENST00000486404 TAS2R30P59541 319 aa9.43□□□□□ -0.9
CHMP3-208ENST00000486404 DLK1P80370 383 aa9.43□□□□□ -0.9
CHMP3-208ENST00000486404 CYP2G1PQ6ZSU1 146 aa9.43□□□□□ -0.9
CHMP3-208ENST00000486404 TMEM144Q7Z5S9 345 aa9.43□□□□□ -0.9
CHMP3-208ENST00000486404 C12orf45Q8N5I9 185 aaPredicted RBP9.43□□□□□ -0.9
CHMP3-208ENST00000486404 OR10P1Q8NGE3 313 aa9.43□□□□□ -0.9
CHMP3-208ENST00000486404 LINC00052Q96N35 136 aa9.43□□□□□ -0.9
CHMP3-208ENST00000486404 PTTG2Q9NZH5 202 aa9.43□□□□□ -0.9
CHMP3-208ENST00000486404 DOK5Q9P104 306 aa9.43□□□□□ -0.9
CHMP3-208ENST00000486404 RCL1Q9Y2P8 373 aaKnown RBP9.43□□□□□ -0.9
CHMP3-208ENST00000486404 LSM5Q9Y4Y9 91 aaKnown RBP9.43□□□□□ -0.9
CHMP3-208ENST00000486404 MBPP02686 304 aaPredicted RBP9.42□□□□□ -0.9
CHMP3-208ENST00000486404 LINC00869P0C866 280 aa9.42□□□□□ -0.9
CHMP3-208ENST00000486404 GATA2P23769 480 aaPredicted RBP9.42□□□□□ -0.9
CHMP3-208ENST00000486404 BCAP31P51572 246 aa9.42□□□□□ -0.9
CHMP3-208ENST00000486404 S100A10P60903 97 aa9.42□□□□□ -0.9
CHMP3-208ENST00000486404 RAP2BP61225 183 aa9.42□□□□□ -0.9
CHMP3-208ENST00000486404 EWSR1Q01844 656 aaKnown RBP eCLIP9.42□□□□□ -0.9
CHMP3-208ENST00000486404 ASAH1Q13510 395 aa9.42□□□□□ -0.9
CHMP3-208ENST00000486404 TMEM14EPQ6UXP3 125 aa9.42□□□□□ -0.9
CHMP3-208ENST00000486404 S100A7AQ86SG5 101 aa9.42□□□□□ -0.9
CHMP3-208ENST00000486404 C1QTNF4Q9BXJ3 329 aa9.42□□□□□ -0.9
CHMP3-208ENST00000486404 MFFQ9GZY8 342 aa9.42□□□□□ -0.9
CHMP3-208ENST00000486404 SLC25A32Q9H2D1 315 aa9.42□□□□□ -0.9
CHMP3-208ENST00000486404 KLK5Q9Y337 293 aaPredicted RBP9.42□□□□□ -0.9
CHMP3-208ENST00000486404 ISLRO14498 428 aa9.41□□□□□ -0.9
CHMP3-208ENST00000486404 CCNKO75909 580 aa9.41□□□□□ -0.9
CHMP3-208ENST00000486404 HLA-DRB4P13762 266 aa9.41□□□□□ -0.9
CHMP3-208ENST00000486404 PVALBP20472 110 aaPredicted RBP9.41□□□□□ -0.9
CHMP3-208ENST00000486404 CAV2P51636 162 aa9.41□□□□□ -0.9
CHMP3-208ENST00000486404 SELENOTP62341 195 aa9.41□□□□□ -0.9
CHMP3-208ENST00000486404 C16orf92Q96LL3 132 aa9.41□□□□□ -0.9
CHMP3-208ENST00000486404 GPR82Q96P67 336 aa9.41□□□□□ -0.9
CHMP3-208ENST00000486404 CLEC5AQ9NY25 188 aa9.41□□□□□ -0.9
CHMP3-208ENST00000486404 TBC1D24Q9ULP9 559 aa9.41□□□□□ -0.9
CHMP3-208ENST00000486404 HIGD1AQ9Y241 93 aa9.41□□□□□ -0.9
CHMP3-208ENST00000486404 HLA-DRB4X5D2U9 266 aa9.41□□□□□ -0.9
CHMP3-208ENST00000486404 DYNC2H1Q8NCM8 4307 aaKnown RBP9.41□□□□□ -0.9
CHMP3-208ENST00000486404 ZNF98A6NK75 572 aa9.4□□□□□ -0.9
CHMP3-208ENST00000486404 FNDC10F2Z333 226 aa9.4□□□□□ -0.9
CHMP3-208ENST00000486404 DEFB4AO15263 64 aa9.4□□□□□ -0.9
CHMP3-208ENST00000486404 HYPMO75409 117 aa9.4□□□□□ -0.9
CHMP3-208ENST00000486404 OR5G3P0C626 314 aa9.4□□□□□ -0.9
CHMP3-208ENST00000486404 PAX9P55771 341 aa9.4□□□□□ -0.9
CHMP3-208ENST00000486404 SLC38A11Q08AI6 406 aa9.4□□□□□ -0.9
CHMP3-208ENST00000486404 EBLN2Q6P2I7 272 aa9.4□□□□□ -0.9
CHMP3-208ENST00000486404 TEPPQ6URK8 271 aa9.4□□□□□ -0.9
CHMP3-208ENST00000486404 GSG1LQ6UXU4 331 aa9.4□□□□□ -0.9
CHMP3-208ENST00000486404 FOXI2Q6ZQN5 318 aa9.4□□□□□ -0.9
CHMP3-208ENST00000486404 ZNF546Q86UE3 836 aa9.4□□□□□ -0.9
CHMP3-208ENST00000486404 C11orf45Q8TAV5 145 aa9.4□□□□□ -0.9
CHMP3-208ENST00000486404 SCRT1Q9BWW7 348 aa9.4□□□□□ -0.9
CHMP3-208ENST00000486404 GPN1Q9HCN4 374 aaPredicted RBP9.4□□□□□ -0.9
CHMP3-208ENST00000486404 NPVFQ9HCQ7 196 aa9.4□□□□□ -0.9
CHMP3-208ENST00000486404 C7orf66A4D0T2 115 aa9.39□□□□□ -0.91
CHMP3-208ENST00000486404 PMS2P5A8MQ11 134 aa9.39□□□□□ -0.91
CHMP3-208ENST00000486404 H3BMM0 161 aa9.39□□□□□ -0.91
CHMP3-208ENST00000486404 H3BRN7 92 aa9.39□□□□□ -0.91
CHMP3-208ENST00000486404 K7EPK0 472 aa9.39□□□□□ -0.91
CHMP3-208ENST00000486404 UPK1BO75841 260 aa9.39□□□□□ -0.91
CHMP3-208ENST00000486404 IGKV3-20P01619 116 aa9.39□□□□□ -0.91
CHMP3-208ENST00000486404 MIFP14174 115 aa9.39□□□□□ -0.91
CHMP3-208ENST00000486404 CEMP1Q6PRD7 247 aaPredicted RBP9.39□□□□□ -0.91
CHMP3-208ENST00000486404 C2orf50Q96LR7 162 aa9.39□□□□□ -0.91
CHMP3-208ENST00000486404 RSG1Q9BU20 258 aa9.39□□□□□ -0.91
CHMP3-208ENST00000486404 GGACTQ9BVM4 153 aa9.39□□□□□ -0.91
CHMP3-208ENST00000486404 RPRMQ9NS64 109 aa9.39□□□□□ -0.91
CHMP3-208ENST00000486404 RNF24Q9Y225 148 aa9.39□□□□□ -0.91
CHMP3-208ENST00000486404 LYSTQ99698 3801 aa9.39□□□□□ -0.91
CHMP3-208ENST00000486404 RYR2Q92736 4967 aa9.38□□□□□ -0.91
CHMP3-208ENST00000486404 IGHV4-28A0A0C4DH34 117 aa9.38□□□□□ -0.91
CHMP3-208ENST00000486404 A6NHS1 94 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms