RNA–Protein interactions for RNA: ENST00000486260.5

THBS3-207, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 1,763 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-207ENST00000486260 DNAJC4Q9NNZ3 241 aa12.61□□□□□ -0.39
THBS3-207ENST00000486260 MRPL27Q9P0M9 148 aaKnown RBP12.61□□□□□ -0.39
THBS3-207ENST00000486260 RABAC1Q9UI14 185 aa12.61□□□□□ -0.39
THBS3-207ENST00000486260 WNK1Q9H4A3 2382 aa12.6□□□□□ -0.39
THBS3-207ENST00000486260 EDN2P20800 178 aa12.6□□□□□ -0.39
THBS3-207ENST00000486260 RAB2AP61019 212 aa12.6□□□□□ -0.39
THBS3-207ENST00000486260 ACOT6Q3I5F7 207 aaPredicted RBP12.6□□□□□ -0.39
THBS3-207ENST00000486260 PXDC1Q5TGL8 231 aa12.6□□□□□ -0.39
THBS3-207ENST00000486260 UHRF2Q96PU4 802 aa12.6□□□□□ -0.39
THBS3-207ENST00000486260 UFC1Q9Y3C8 167 aa12.6□□□□□ -0.39
THBS3-207ENST00000486260 IGHV3-49A0A0A0MS15 119 aa12.59□□□□□ -0.39
THBS3-207ENST00000486260 C10orf113Q5VZT2 155 aa12.59□□□□□ -0.39
THBS3-207ENST00000486260 EIF5AL1Q6IS14 154 aaKnown RBP12.59□□□□□ -0.39
THBS3-207ENST00000486260 ALKAL2Q6UX46 152 aa12.59□□□□□ -0.39
THBS3-207ENST00000486260 OR1L4Q8NGR5 311 aa12.59□□□□□ -0.39
THBS3-207ENST00000486260 METTL26Q96S19 204 aa12.59□□□□□ -0.39
THBS3-207ENST00000486260 PFDN5Q99471 154 aa12.59□□□□□ -0.39
THBS3-207ENST00000486260 DAZ1Q9NQZ3 744 aaKnown RBP12.59□□□□□ -0.39
THBS3-207ENST00000486260 HIGD1AQ9Y241 93 aa12.59□□□□□ -0.39
THBS3-207ENST00000486260 ANK2Q01484 3957 aa12.59□□□□□ -0.39
THBS3-207ENST00000486260 ELOA3CA0A087WX78 387 aaPredicted RBP12.58□□□□□ -0.39
THBS3-207ENST00000486260 TMEM213A2RRL7 107 aa12.58□□□□□ -0.39
THBS3-207ENST00000486260 A8MWP6 167 aa12.58□□□□□ -0.39
THBS3-207ENST00000486260 K7EMT4 169 aa12.58□□□□□ -0.39
THBS3-207ENST00000486260 OVOL1O14753 267 aa12.58□□□□□ -0.39
THBS3-207ENST00000486260 APOHP02749 345 aaPredicted RBP12.58□□□□□ -0.39
THBS3-207ENST00000486260 NPPCP23582 126 aa12.58□□□□□ -0.39
THBS3-207ENST00000486260 AKR1C8PQ5T2L2 129 aa12.58□□□□□ -0.39
THBS3-207ENST00000486260 OR10G4Q8NGN3 311 aa12.58□□□□□ -0.39
THBS3-207ENST00000486260 OR10G9Q8NGN4 311 aa12.58□□□□□ -0.39
THBS3-207ENST00000486260 OR10G7Q8NGN6 311 aa12.58□□□□□ -0.39
THBS3-207ENST00000486260 OR9G4Q8NGQ1 327 aa12.58□□□□□ -0.39
THBS3-207ENST00000486260 RPRMQ9NS64 109 aa12.58□□□□□ -0.39
THBS3-207ENST00000486260 IGHV3OR16-13A0A075B7E8 117 aa12.58□□□□□ -0.4
THBS3-207ENST00000486260 IGHV3-74A0A0B4J1X5 117 aa12.58□□□□□ -0.4
THBS3-207ENST00000486260 M0QZ24 198 aa12.58□□□□□ -0.4
THBS3-207ENST00000486260 MBP02144 154 aa12.58□□□□□ -0.4
THBS3-207ENST00000486260 CRYBB3P26998 211 aa12.58□□□□□ -0.4
THBS3-207ENST00000486260 TMEM41BQ5BJD5 291 aa12.58□□□□□ -0.4
THBS3-207ENST00000486260 LINC00305Q7Z4B0 112 aa12.58□□□□□ -0.4
THBS3-207ENST00000486260 LINC00482Q8N8I6 264 aa12.58□□□□□ -0.4
THBS3-207ENST00000486260 GATAD1Q8WUU5 269 aa12.58□□□□□ -0.4
THBS3-207ENST00000486260 SLC25A39Q9BZJ4 359 aaPredicted RBP12.58□□□□□ -0.4
THBS3-207ENST00000486260 TRRAPQ9Y4A5 3859 aa12.57□□□□□ -0.4
THBS3-207ENST00000486260 IGHV3-66A0A0C4DH42 116 aa12.57□□□□□ -0.4
THBS3-207ENST00000486260 FAM74A1Q5RGS3 127 aa12.57□□□□□ -0.4
THBS3-207ENST00000486260 FAM78BQ5VT40 261 aa12.57□□□□□ -0.4
THBS3-207ENST00000486260 MORN5Q5VZ52 161 aa12.57□□□□□ -0.4
THBS3-207ENST00000486260 SPATA31B1PQ5VZV4 182 aa12.57□□□□□ -0.4
THBS3-207ENST00000486260 FAM122CQ6P4D5 195 aa12.57□□□□□ -0.4
THBS3-207ENST00000486260 RPP25LQ8N5L8 163 aaKnown RBP12.57□□□□□ -0.4
THBS3-207ENST00000486260 PHYHIPLQ96FC7 376 aa12.57□□□□□ -0.4
THBS3-207ENST00000486260 SEPSECSQ9HD40 501 aaKnown RBP12.57□□□□□ -0.4
THBS3-207ENST00000486260 PEMTQ9UBM1 199 aa12.57□□□□□ -0.4
THBS3-207ENST00000486260 C2orf70A6NJV1 201 aa12.56□□□□□ -0.4
THBS3-207ENST00000486260 EIF3GO75821 320 aaKnown RBP eCLIP12.56□□□□□ -0.4
THBS3-207ENST00000486260 LEMD1Q68G75 181 aa12.56□□□□□ -0.4
THBS3-207ENST00000486260 TEX261Q6UWH6 196 aa12.56□□□□□ -0.4
THBS3-207ENST00000486260 IL34Q6ZMJ4 242 aa12.56□□□□□ -0.4
THBS3-207ENST00000486260 SPATA3Q8NHX4 192 aa12.56□□□□□ -0.4
THBS3-207ENST00000486260 SUN5Q8TC36 379 aa12.56□□□□□ -0.4
THBS3-207ENST00000486260 SCRT1Q9BWW7 348 aa12.56□□□□□ -0.4
THBS3-207ENST00000486260 U3KQE9 123 aa12.56□□□□□ -0.4
THBS3-207ENST00000486260 IGHV7-4-1A0A0J9YVY3 117 aa12.56□□□□□ -0.4
THBS3-207ENST00000486260 UMAD1C9J7I0 102 aa12.56□□□□□ -0.4
THBS3-207ENST00000486260 H3BRN7 92 aa12.56□□□□□ -0.4
THBS3-207ENST00000486260 CBLN1P23435 193 aa12.56□□□□□ -0.4
THBS3-207ENST00000486260 FHITP49789 147 aa12.56□□□□□ -0.4
THBS3-207ENST00000486260 MIR17HGQ75NE6 70 aa12.56□□□□□ -0.4
THBS3-207ENST00000486260 SHANK2-AS3Q9BTD1 123 aa12.56□□□□□ -0.4
THBS3-207ENST00000486260 SMPXQ9UHP9 88 aa12.56□□□□□ -0.4
THBS3-207ENST00000486260 TRAV5A0A0B4J249 113 aa12.55□□□□□ -0.4
THBS3-207ENST00000486260 ZNF98A6NK75 572 aa12.55□□□□□ -0.4
THBS3-207ENST00000486260 CSN3P07498 182 aa12.55□□□□□ -0.4
THBS3-207ENST00000486260 FOLR2P14207 255 aa12.55□□□□□ -0.4
THBS3-207ENST00000486260 SULT1A2P50226 295 aa12.55□□□□□ -0.4
THBS3-207ENST00000486260 RHOBP62745 196 aa12.55□□□□□ -0.4
THBS3-207ENST00000486260 ADAMTSL5Q6ZMM2 481 aa12.55□□□□□ -0.4
THBS3-207ENST00000486260 CCDC28AQ8IWP9 274 aa12.55□□□□□ -0.4
THBS3-207ENST00000486260 RHPN1-AS1Q9BWJ2 59 aa12.55□□□□□ -0.4
THBS3-207ENST00000486260 SLC25A22Q9H936 323 aa12.55□□□□□ -0.4
THBS3-207ENST00000486260 FUT9Q9Y231 359 aa12.55□□□□□ -0.4
THBS3-207ENST00000486260 SELENOKQ9Y6D0 94 aa12.55□□□□□ -0.4
THBS3-207ENST00000486260 A0A1W2PPV4 95 aa12.54□□□□□ -0.4
THBS3-207ENST00000486260 CHEK1O14757 476 aa12.54□□□□□ -0.4
THBS3-207ENST00000486260 BUB3O43684 328 aa12.54□□□□□ -0.4
THBS3-207ENST00000486260 KRTAP21-3Q3LHN1 58 aa12.54□□□□□ -0.4
THBS3-207ENST00000486260 ZNF680Q8NEM1 530 aa12.54□□□□□ -0.4
THBS3-207ENST00000486260 NARS2Q96I59 477 aaKnown RBP12.54□□□□□ -0.4
THBS3-207ENST00000486260 ELOVL1Q9BW60 279 aa12.54□□□□□ -0.4
THBS3-207ENST00000486260 HMGB3O15347 200 aaKnown RBP12.53□□□□□ -0.4
THBS3-207ENST00000486260 C8orf88P0DMB2 117 aa12.53□□□□□ -0.4
THBS3-207ENST00000486260 CDC34P49427 236 aaPredicted RBP12.53□□□□□ -0.4
THBS3-207ENST00000486260 ZNF726P1Q15940 193 aa12.53□□□□□ -0.4
THBS3-207ENST00000486260 SSX7Q7RTT5 188 aa12.53□□□□□ -0.4
THBS3-207ENST00000486260 S100A7AQ86SG5 101 aa12.53□□□□□ -0.4
THBS3-207ENST00000486260 FAM213BQ8TBF2 198 aa12.53□□□□□ -0.4
THBS3-207ENST00000486260 RNF2Q99496 336 aa12.53□□□□□ -0.4
THBS3-207ENST00000486260 MRPL32Q9BYC8 188 aaKnown RBP12.53□□□□□ -0.4
THBS3-207ENST00000486260 ACTR3CQ9C0K3 210 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms