RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 C9JQL5 133 aa11.13□□□□□ -0.63
COL9A1-207ENST00000486080 C8orf88P0DMB2 117 aa11.13□□□□□ -0.63
COL9A1-207ENST00000486080 RPL15P61313 204 aaKnown RBP11.13□□□□□ -0.63
COL9A1-207ENST00000486080 TOMM20LQ6UXN7 152 aa11.13□□□□□ -0.63
COL9A1-207ENST00000486080 ZNF600Q6ZNG1 722 aa11.13□□□□□ -0.63
COL9A1-207ENST00000486080 JMJD8Q96S16 334 aa11.13□□□□□ -0.63
COL9A1-207ENST00000486080 ATP6V0BQ99437 205 aa11.13□□□□□ -0.63
COL9A1-207ENST00000486080 RNF2Q99496 336 aa11.13□□□□□ -0.63
COL9A1-207ENST00000486080 EIF5A2Q9GZV4 153 aaKnown RBP11.13□□□□□ -0.63
COL9A1-207ENST00000486080 TECRQ9NZ01 308 aaKnown RBP11.13□□□□□ -0.63
COL9A1-207ENST00000486080 RBFOX3A6NFN3 312 aa11.12□□□□□ -0.63
COL9A1-207ENST00000486080 CXorf1O96002 111 aa11.12□□□□□ -0.63
COL9A1-207ENST00000486080 HIST2H2BDQ6DRA6 164 aa11.12□□□□□ -0.63
COL9A1-207ENST00000486080 RNF152Q8N8N0 203 aa11.12□□□□□ -0.63
COL9A1-207ENST00000486080 MYOZ3Q8TDC0 251 aa11.12□□□□□ -0.63
COL9A1-207ENST00000486080 OR7C2O60412 319 aa11.12□□□□□ -0.63
COL9A1-207ENST00000486080 CD5P06127 495 aa11.12□□□□□ -0.63
COL9A1-207ENST00000486080 GCHFRP30047 84 aa11.12□□□□□ -0.63
COL9A1-207ENST00000486080 TCTEX1D4Q5JR98 221 aa11.12□□□□□ -0.63
COL9A1-207ENST00000486080 OR5AU1Q8NGC0 362 aa11.12□□□□□ -0.63
COL9A1-207ENST00000486080 LINC01006Q8NI28 216 aa11.12□□□□□ -0.63
COL9A1-207ENST00000486080 SLC25A39Q9BZJ4 359 aaPredicted RBP11.12□□□□□ -0.63
COL9A1-207ENST00000486080 ZFAND3Q9H8U3 227 aa11.12□□□□□ -0.63
COL9A1-207ENST00000486080 TREM1Q9NP99 234 aa11.12□□□□□ -0.63
COL9A1-207ENST00000486080 NIPBLQ6KC79 2804 aaeCLIP11.11□□□□□ -0.63
COL9A1-207ENST00000486080 I3L521 148 aa11.11□□□□□ -0.63
COL9A1-207ENST00000486080 BMPR1BO00238 502 aa11.11□□□□□ -0.63
COL9A1-207ENST00000486080 TCF21O43680 179 aa11.11□□□□□ -0.63
COL9A1-207ENST00000486080 OR10J4P0C629 311 aa11.11□□□□□ -0.63
COL9A1-207ENST00000486080 ICAM4Q14773 271 aa11.11□□□□□ -0.63
COL9A1-207ENST00000486080 KHDC3LQ587J8 217 aa11.11□□□□□ -0.63
COL9A1-207ENST00000486080 UQCC3Q6UW78 93 aa11.11□□□□□ -0.63
COL9A1-207ENST00000486080 C16orf95Q9H693 158 aa11.11□□□□□ -0.63
COL9A1-207ENST00000486080 LOC102723971A0A1B0GUV8 181 aa11.1□□□□□ -0.63
COL9A1-207ENST00000486080 PYYP10082 97 aa11.1□□□□□ -0.63
COL9A1-207ENST00000486080 BCL2P10415 239 aa11.1□□□□□ -0.63
COL9A1-207ENST00000486080 TAS2R45P59539 299 aa11.1□□□□□ -0.63
COL9A1-207ENST00000486080 RXFP4Q8TDU9 374 aa11.1□□□□□ -0.63
COL9A1-207ENST00000486080 NARS2Q96I59 477 aaKnown RBP11.1□□□□□ -0.63
COL9A1-207ENST00000486080 SHANK2-AS3Q9BTD1 123 aa11.1□□□□□ -0.63
COL9A1-207ENST00000486080 PEF1Q9UBV8 284 aaKnown RBP11.1□□□□□ -0.63
COL9A1-207ENST00000486080 PAGE4O60829 102 aa11.09□□□□□ -0.63
COL9A1-207ENST00000486080 SNRPCP09234 159 aaKnown RBP11.09□□□□□ -0.63
COL9A1-207ENST00000486080 PSMB3P49720 205 aa11.09□□□□□ -0.63
COL9A1-207ENST00000486080 UBE2G2P60604 165 aa11.09□□□□□ -0.63
COL9A1-207ENST00000486080 RELQ04864 619 aaPredicted RBP11.09□□□□□ -0.63
COL9A1-207ENST00000486080 PMS2P11Q13670 270 aa11.09□□□□□ -0.63
COL9A1-207ENST00000486080 ZNF506Q5JVG8 444 aa11.09□□□□□ -0.63
COL9A1-207ENST00000486080 C18orf65Q6ZTR6 163 aa11.09□□□□□ -0.63
COL9A1-207ENST00000486080 WIPF2Q8TF74 440 aaPredicted RBP11.09□□□□□ -0.63
COL9A1-207ENST00000486080 CLPSL1A2RUU4 121 aa11.09□□□□□ -0.63
COL9A1-207ENST00000486080 H3BRN7 92 aa11.09□□□□□ -0.63
COL9A1-207ENST00000486080 ZNF207O43670 478 aaKnown RBP11.09□□□□□ -0.63
COL9A1-207ENST00000486080 PEA15Q15121 130 aa11.09□□□□□ -0.63
COL9A1-207ENST00000486080 PQLC2Q6ZP29 291 aa11.09□□□□□ -0.63
COL9A1-207ENST00000486080 UBE2E2Q96LR5 201 aa11.09□□□□□ -0.63
COL9A1-207ENST00000486080 LINC00052Q96N35 136 aa11.09□□□□□ -0.63
COL9A1-207ENST00000486080 PAXXQ9BUH6 204 aa11.09□□□□□ -0.63
COL9A1-207ENST00000486080 NDUFA7O95182 113 aa11.08□□□□□ -0.64
COL9A1-207ENST00000486080 IFNA1P01562 189 aa11.08□□□□□ -0.64
COL9A1-207ENST00000486080 HSPB1P04792 205 aaKnown RBP11.08□□□□□ -0.64
COL9A1-207ENST00000486080 UNQ9165/PRO28630Q6UXU0 137 aa11.08□□□□□ -0.64
COL9A1-207ENST00000486080 C20orf24Q9BUV8 137 aa11.08□□□□□ -0.64
COL9A1-207ENST00000486080 OR51M1Q9H341 326 aa11.08□□□□□ -0.64
COL9A1-207ENST00000486080 RABAC1Q9UI14 185 aa11.08□□□□□ -0.64
COL9A1-207ENST00000486080 C2CD3Q4AC94 2353 aa11.08□□□□□ -0.64
COL9A1-207ENST00000486080 ZNF98A6NK75 572 aa11.07□□□□□ -0.64
COL9A1-207ENST00000486080 GGCTO75223 188 aaKnown RBP11.07□□□□□ -0.64
COL9A1-207ENST00000486080 LGALS1P09382 135 aaKnown RBP11.07□□□□□ -0.64
COL9A1-207ENST00000486080 UBE2L3P68036 154 aaKnown RBP11.07□□□□□ -0.64
COL9A1-207ENST00000486080 C11orf44Q8N8P7 122 aa11.07□□□□□ -0.64
COL9A1-207ENST00000486080 FXYD5Q96DB9 178 aa11.07□□□□□ -0.64
COL9A1-207ENST00000486080 MANBALQ9NQG1 85 aa11.07□□□□□ -0.64
COL9A1-207ENST00000486080 VAX2Q9UIW0 290 aa11.07□□□□□ -0.64
COL9A1-207ENST00000486080 YTHDF2Q9Y5A9 579 aaKnown RBP11.07□□□□□ -0.64
COL9A1-207ENST00000486080 TMEM218A2RU14 115 aa11.07□□□□□ -0.64
COL9A1-207ENST00000486080 HAX1O00165 279 aa11.07□□□□□ -0.64
COL9A1-207ENST00000486080 NDUFA4O00483 81 aa11.07□□□□□ -0.64
COL9A1-207ENST00000486080 GP9P14770 177 aa11.07□□□□□ -0.64
COL9A1-207ENST00000486080 PPT1P50897 306 aa11.07□□□□□ -0.64
COL9A1-207ENST00000486080 FAM209BQ5JX69 171 aa11.07□□□□□ -0.64
COL9A1-207ENST00000486080 IGHV3-49A0A0A0MS15 119 aa11.06□□□□□ -0.64
COL9A1-207ENST00000486080 APOHP02749 345 aaPredicted RBP11.06□□□□□ -0.64
COL9A1-207ENST00000486080 SFTA3P0C7M3 94 aa11.06□□□□□ -0.64
COL9A1-207ENST00000486080 CD28P10747 220 aa11.06□□□□□ -0.64
COL9A1-207ENST00000486080 S100A1P23297 94 aa11.06□□□□□ -0.64
COL9A1-207ENST00000486080 ATP5G3P48201 142 aa11.06□□□□□ -0.64
COL9A1-207ENST00000486080 CD81P60033 236 aa11.06□□□□□ -0.64
COL9A1-207ENST00000486080 KHDC1LQ5JSQ8 128 aa11.06□□□□□ -0.64
COL9A1-207ENST00000486080 CST9LP1Q5W188 147 aa11.06□□□□□ -0.64
COL9A1-207ENST00000486080 SUN5Q8TC36 379 aa11.06□□□□□ -0.64
COL9A1-207ENST00000486080 TMEM167BQ9NRX6 74 aa11.06□□□□□ -0.64
COL9A1-207ENST00000486080 JMJD1CQ15652 2540 aa11.05□□□□□ -0.64
COL9A1-207ENST00000486080 IGHV3OR16-13A0A075B7E8 117 aa11.05□□□□□ -0.64
COL9A1-207ENST00000486080 IGHV3-74A0A0B4J1X5 117 aa11.05□□□□□ -0.64
COL9A1-207ENST00000486080 IGHV3-66A0A0C4DH42 116 aa11.05□□□□□ -0.64
COL9A1-207ENST00000486080 FAM74A7A6NL05 159 aa11.05□□□□□ -0.64
COL9A1-207ENST00000486080 H3BTX0 84 aa11.05□□□□□ -0.64
COL9A1-207ENST00000486080 SRP19P09132 144 aaKnown RBP11.05□□□□□ -0.64
COL9A1-207ENST00000486080 ADCYAP1P18509 176 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms