RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 NUDT15Q9NV35 164 aa12.89□□□□□ -0.35
COL6A1-204ENST00000486023 FBXL17Q9UF56 701 aa12.89□□□□□ -0.35
COL6A1-204ENST00000486023 FAM240BA0A1B0GVZ2 78 aa12.88□□□□□ -0.35
COL6A1-204ENST00000486023 C5orf51A6NDU8 294 aa12.88□□□□□ -0.35
COL6A1-204ENST00000486023 IL5P05113 134 aa12.88□□□□□ -0.35
COL6A1-204ENST00000486023 SPP1P10451 314 aa12.88□□□□□ -0.35
COL6A1-204ENST00000486023 ID1P41134 155 aa12.88□□□□□ -0.35
COL6A1-204ENST00000486023 PAX9P55771 341 aa12.88□□□□□ -0.35
COL6A1-204ENST00000486023 NANOS2P60321 138 aaKnown RBP12.88□□□□□ -0.35
COL6A1-204ENST00000486023 CCDC32Q9BV29 185 aa12.88□□□□□ -0.35
COL6A1-204ENST00000486023 TMEM147Q9BVK8 224 aa12.88□□□□□ -0.35
COL6A1-204ENST00000486023 RCL1Q9Y2P8 373 aaKnown RBP12.88□□□□□ -0.35
COL6A1-204ENST00000486023 LSM5Q9Y4Y9 91 aaKnown RBP12.88□□□□□ -0.35
COL6A1-204ENST00000486023 DNAH1Q9P2D7 4330 aa12.87□□□□□ -0.35
COL6A1-204ENST00000486023 L7N2F9 121 aa12.87□□□□□ -0.35
COL6A1-204ENST00000486023 CFDP00746 253 aaPredicted RBP12.87□□□□□ -0.35
COL6A1-204ENST00000486023 GIG44P09565 113 aaPredicted RBP12.87□□□□□ -0.35
COL6A1-204ENST00000486023 H2AFB2P0C5Z0 115 aa12.87□□□□□ -0.35
COL6A1-204ENST00000486023 FXYD7P58549 80 aa12.87□□□□□ -0.35
COL6A1-204ENST00000486023 VAMP2P63027 116 aa12.87□□□□□ -0.35
COL6A1-204ENST00000486023 C1orf194Q5T5A4 169 aa12.87□□□□□ -0.35
COL6A1-204ENST00000486023 CEMP1Q6PRD7 247 aaPredicted RBP12.87□□□□□ -0.35
COL6A1-204ENST00000486023 CYP2G1PQ6ZSU1 146 aa12.87□□□□□ -0.35
COL6A1-204ENST00000486023 OR10P1Q8NGE3 313 aa12.87□□□□□ -0.35
COL6A1-204ENST00000486023 C11orf45Q8TAV5 145 aa12.87□□□□□ -0.35
COL6A1-204ENST00000486023 RSG1Q9BU20 258 aa12.87□□□□□ -0.35
COL6A1-204ENST00000486023 XCL2Q9UBD3 114 aa12.87□□□□□ -0.35
COL6A1-204ENST00000486023 PLECQ15149 4684 aaKnown RBP12.87□□□□□ -0.35
COL6A1-204ENST00000486023 NUPR2A6NF83 97 aa12.86□□□□□ -0.35
COL6A1-204ENST00000486023 ZNF98A6NK75 572 aa12.86□□□□□ -0.35
COL6A1-204ENST00000486023 MBPP02686 304 aaPredicted RBP12.86□□□□□ -0.35
COL6A1-204ENST00000486023 BCAP31P51572 246 aa12.86□□□□□ -0.35
COL6A1-204ENST00000486023 FGL1Q08830 312 aa12.86□□□□□ -0.35
COL6A1-204ENST00000486023 GDF5OSQ5U4N7 250 aa12.86□□□□□ -0.35
COL6A1-204ENST00000486023 TMEM144Q7Z5S9 345 aa12.86□□□□□ -0.35
COL6A1-204ENST00000486023 C12orf45Q8N5I9 185 aaPredicted RBP12.86□□□□□ -0.35
COL6A1-204ENST00000486023 ZNF431Q8TF32 576 aaPredicted RBP12.86□□□□□ -0.35
COL6A1-204ENST00000486023 C16orf92Q96LL3 132 aa12.86□□□□□ -0.35
COL6A1-204ENST00000486023 SLC25A32Q9H2D1 315 aa12.86□□□□□ -0.35
COL6A1-204ENST00000486023 MGAT4CQ9UBM8 478 aa12.86□□□□□ -0.35
COL6A1-204ENST00000486023 LYSTQ99698 3801 aa12.86□□□□□ -0.35
COL6A1-204ENST00000486023 PMS2P5A8MQ11 134 aa12.85□□□□□ -0.35
COL6A1-204ENST00000486023 H3BMM0 161 aa12.85□□□□□ -0.35
COL6A1-204ENST00000486023 LY6G6CO95867 125 aa12.85□□□□□ -0.35
COL6A1-204ENST00000486023 OR5G3P0C626 314 aa12.85□□□□□ -0.35
COL6A1-204ENST00000486023 GALR1P47211 349 aa12.85□□□□□ -0.35
COL6A1-204ENST00000486023 NUTF2P61970 127 aaKnown RBP12.85□□□□□ -0.35
COL6A1-204ENST00000486023 MZT2BQ6NZ67 158 aa12.85□□□□□ -0.35
COL6A1-204ENST00000486023 TMEM14EPQ6UXP3 125 aa12.85□□□□□ -0.35
COL6A1-204ENST00000486023 OR4B1Q8NGF8 309 aa12.85□□□□□ -0.35
COL6A1-204ENST00000486023 PHLDA1Q8WV24 401 aaPredicted RBP12.85□□□□□ -0.35
COL6A1-204ENST00000486023 S100ZQ8WXG8 99 aa12.85□□□□□ -0.35
COL6A1-204ENST00000486023 KLK5Q9Y337 293 aaPredicted RBP12.85□□□□□ -0.35
COL6A1-204ENST00000486023 IGHV4-28A0A0C4DH34 117 aa12.84□□□□□ -0.35
COL6A1-204ENST00000486023 C7orf66A4D0T2 115 aa12.84□□□□□ -0.35
COL6A1-204ENST00000486023 RAP2BP61225 183 aa12.84□□□□□ -0.35
COL6A1-204ENST00000486023 TMEM41BQ5BJD5 291 aa12.84□□□□□ -0.35
COL6A1-204ENST00000486023 SEPSECSQ9HD40 501 aaKnown RBP12.84□□□□□ -0.35
COL6A1-204ENST00000486023 TBC1D24Q9ULP9 559 aa12.84□□□□□ -0.35
COL6A1-204ENST00000486023 F6UB75 175 aa12.83□□□□□ -0.36
COL6A1-204ENST00000486023 TSC22D2O75157 780 aa12.83□□□□□ -0.36
COL6A1-204ENST00000486023 HYPMO75409 117 aa12.83□□□□□ -0.36
COL6A1-204ENST00000486023 LINC00869P0C866 280 aa12.83□□□□□ -0.36
COL6A1-204ENST00000486023 PSMB3P49720 205 aa12.83□□□□□ -0.36
COL6A1-204ENST00000486023 S100A10P60903 97 aa12.83□□□□□ -0.36
COL6A1-204ENST00000486023 DLK1P80370 383 aa12.83□□□□□ -0.36
COL6A1-204ENST00000486023 SLC38A11Q08AI6 406 aa12.83□□□□□ -0.36
COL6A1-204ENST00000486023 ARL16Q0P5N6 197 aa12.83□□□□□ -0.36
COL6A1-204ENST00000486023 IGFL4Q6B9Z1 124 aa12.83□□□□□ -0.36
COL6A1-204ENST00000486023 SCRT1Q9BWW7 348 aa12.83□□□□□ -0.36
COL6A1-204ENST00000486023 NPVFQ9HCQ7 196 aa12.83□□□□□ -0.36
COL6A1-204ENST00000486023 HIGD1AQ9Y241 93 aa12.83□□□□□ -0.36
COL6A1-204ENST00000486023 AGRNO00468 2067 aa12.83□□□□□ -0.36
COL6A1-204ENST00000486023 IGHV3OR16-12A0A075B7B8 117 aa12.82□□□□□ -0.36
COL6A1-204ENST00000486023 RBMY1A1P0DJD3 496 aaKnown RBP12.82□□□□□ -0.36
COL6A1-204ENST00000486023 RBMY1CP0DJD4 496 aa12.82□□□□□ -0.36
COL6A1-204ENST00000486023 HLA-DRB4P13762 266 aa12.82□□□□□ -0.36
COL6A1-204ENST00000486023 ATF4P18848 351 aaPredicted RBP12.82□□□□□ -0.36
COL6A1-204ENST00000486023 S100A7P31151 101 aa12.82□□□□□ -0.36
COL6A1-204ENST00000486023 CAV2P51636 162 aa12.82□□□□□ -0.36
COL6A1-204ENST00000486023 TAS2R30P59541 319 aa12.82□□□□□ -0.36
COL6A1-204ENST00000486023 RBMY1FQ15415 496 aaKnown RBP12.82□□□□□ -0.36
COL6A1-204ENST00000486023 EBLN2Q6P2I7 272 aa12.82□□□□□ -0.36
COL6A1-204ENST00000486023 SLC25A39Q9BZJ4 359 aaPredicted RBP12.82□□□□□ -0.36
COL6A1-204ENST00000486023 MFFQ9GZY8 342 aa12.82□□□□□ -0.36
COL6A1-204ENST00000486023 ARL6Q9H0F7 186 aa12.82□□□□□ -0.36
COL6A1-204ENST00000486023 C11orf68Q9H3H3 251 aaKnown RBP12.82□□□□□ -0.36
COL6A1-204ENST00000486023 SAV1Q9H4B6 383 aaPredicted RBP12.82□□□□□ -0.36
COL6A1-204ENST00000486023 HLA-DRB4X5D2U9 266 aa12.82□□□□□ -0.36
COL6A1-204ENST00000486023 A6NHS1 94 aa12.81□□□□□ -0.36
COL6A1-204ENST00000486023 K7EPK0 472 aa12.81□□□□□ -0.36
COL6A1-204ENST00000486023 SOCS3O14543 225 aa12.81□□□□□ -0.36
COL6A1-204ENST00000486023 CST7O76096 145 aa12.81□□□□□ -0.36
COL6A1-204ENST00000486023 TEPPQ6URK8 271 aa12.81□□□□□ -0.36
COL6A1-204ENST00000486023 Q8NAQ8 132 aa12.81□□□□□ -0.36
COL6A1-204ENST00000486023 ENKURQ8TC29 256 aa12.81□□□□□ -0.36
COL6A1-204ENST00000486023 C20orf173Q96LM9 149 aa12.81□□□□□ -0.36
COL6A1-204ENST00000486023 C2orf50Q96LR7 162 aa12.81□□□□□ -0.36
COL6A1-204ENST00000486023 UHRF2Q96PU4 802 aa12.81□□□□□ -0.36
COL6A1-204ENST00000486023 C1QTNF4Q9BXJ3 329 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms