RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 NKX2-1P43699 371 aaPredicted RBP5.13□□□□□ -1.59
VPS50-218ENST00000485994 TFPI2P48307 235 aa5.13□□□□□ -1.59
VPS50-218ENST00000485994 RPL11P62913 178 aaKnown RBP5.13□□□□□ -1.59
VPS50-218ENST00000485994 C4orf46Q504U0 113 aa5.13□□□□□ -1.59
VPS50-218ENST00000485994 MORN3Q6PF18 240 aaPredicted RBP5.13□□□□□ -1.59
VPS50-218ENST00000485994 TMEM144Q7Z5S9 345 aa5.13□□□□□ -1.59
VPS50-218ENST00000485994 TMEM217Q8N7C4 229 aa5.13□□□□□ -1.59
VPS50-218ENST00000485994 RNF125Q96EQ8 232 aa5.13□□□□□ -1.59
VPS50-218ENST00000485994 ACY3Q96HD9 319 aa5.13□□□□□ -1.59
VPS50-218ENST00000485994 CLUHP3Q96NS8 147 aa5.13□□□□□ -1.59
VPS50-218ENST00000485994 RARRES2Q99969 163 aa5.13□□□□□ -1.59
VPS50-218ENST00000485994 WDR12Q9GZL7 423 aaKnown RBP5.13□□□□□ -1.59
VPS50-218ENST00000485994 NRN1Q9NPD7 142 aa5.13□□□□□ -1.59
VPS50-218ENST00000485994 FLVCR2Q9UPI3 526 aa5.13□□□□□ -1.59
VPS50-218ENST00000485994 STRAPQ9Y3F4 350 aaKnown RBP5.13□□□□□ -1.59
VPS50-218ENST00000485994 IGHV3-66A0A0C4DH42 116 aa5.12□□□□□ -1.59
VPS50-218ENST00000485994 LYRM1O43325 122 aa5.12□□□□□ -1.59
VPS50-218ENST00000485994 ADAP1O75689 374 aa5.12□□□□□ -1.59
VPS50-218ENST00000485994 GIG44P09565 113 aaPredicted RBP5.12□□□□□ -1.59
VPS50-218ENST00000485994 IAPPP10997 89 aa5.12□□□□□ -1.59
VPS50-218ENST00000485994 RPL35AP18077 110 aaKnown RBP5.12□□□□□ -1.59
VPS50-218ENST00000485994 PAX9P55771 341 aa5.12□□□□□ -1.59
VPS50-218ENST00000485994 PLP1P60201 277 aa5.12□□□□□ -1.59
VPS50-218ENST00000485994 SNRPD3P62318 126 aaKnown RBP5.12□□□□□ -1.59
VPS50-218ENST00000485994 ZNF90Q03938 601 aa5.12□□□□□ -1.59
VPS50-218ENST00000485994 ASAH1Q13510 395 aa5.12□□□□□ -1.59
VPS50-218ENST00000485994 DEFB135Q30KP9 77 aa5.12□□□□□ -1.59
VPS50-218ENST00000485994 SAMD13Q5VXD3 122 aa5.12□□□□□ -1.59
VPS50-218ENST00000485994 SPATA31B1PQ5VZV4 182 aa5.12□□□□□ -1.59
VPS50-218ENST00000485994 ZFAND6Q6FIF0 208 aa5.12□□□□□ -1.59
VPS50-218ENST00000485994 TMEM14EPQ6UXP3 125 aa5.12□□□□□ -1.59
VPS50-218ENST00000485994 SIGLEC15Q6ZMC9 328 aa5.12□□□□□ -1.59
VPS50-218ENST00000485994 TRPT1Q86TN4 253 aaKnown RBP5.12□□□□□ -1.59
VPS50-218ENST00000485994 STHQ8IWL8 128 aa5.12□□□□□ -1.59
VPS50-218ENST00000485994 FAM24BQ8N5W8 94 aa5.12□□□□□ -1.59
VPS50-218ENST00000485994 STXBP6Q8NFX7 210 aa5.12□□□□□ -1.59
VPS50-218ENST00000485994 GPR82Q96P67 336 aa5.12□□□□□ -1.59
VPS50-218ENST00000485994 RAB40CQ96S21 281 aa5.12□□□□□ -1.59
VPS50-218ENST00000485994 C11orf68Q9H3H3 251 aaKnown RBP5.12□□□□□ -1.59
VPS50-218ENST00000485994 NPVFQ9HCQ7 196 aa5.12□□□□□ -1.59
VPS50-218ENST00000485994 A0A0J9YWU9 116 aa5.11□□□□□ -1.59
VPS50-218ENST00000485994 ZNF705EA8MWA4 302 aaPredicted RBP5.11□□□□□ -1.59
VPS50-218ENST00000485994 K7EPK0 472 aa5.11□□□□□ -1.59
VPS50-218ENST00000485994 TSC22D2O75157 780 aa5.11□□□□□ -1.59
VPS50-218ENST00000485994 ANXA7P20073 488 aaKnown RBP5.11□□□□□ -1.59
VPS50-218ENST00000485994 MEOX2P50222 304 aa5.11□□□□□ -1.59
VPS50-218ENST00000485994 NUTF2P61970 127 aaKnown RBP5.11□□□□□ -1.59
VPS50-218ENST00000485994 SELENOTP62341 195 aa5.11□□□□□ -1.59
VPS50-218ENST00000485994 POLR2GP62487 172 aaKnown RBP eCLIP5.11□□□□□ -1.59
VPS50-218ENST00000485994 DLK1P80370 383 aa5.11□□□□□ -1.59
VPS50-218ENST00000485994 IL15RAQ13261 267 aa5.11□□□□□ -1.59
VPS50-218ENST00000485994 SPANXN5Q5MJ07 72 aa5.11□□□□□ -1.59
VPS50-218ENST00000485994 ZBTB8BQ8NAP8 495 aaPredicted RBP5.11□□□□□ -1.59
VPS50-218ENST00000485994 CSNK1G2-AS1Q8NCQ2 148 aa5.11□□□□□ -1.59
VPS50-218ENST00000485994 GGACTQ9BVM4 153 aa5.11□□□□□ -1.59
VPS50-218ENST00000485994 MAGT1Q9H0U3 335 aa5.11□□□□□ -1.59
VPS50-218ENST00000485994 PSENENQ9NZ42 101 aa5.11□□□□□ -1.59
VPS50-218ENST00000485994 HYDINQ4G0P3 5121 aa5.11□□□□□ -1.59
VPS50-218ENST00000485994 NUPR2A6NF83 97 aa5.1□□□□□ -1.59
VPS50-218ENST00000485994 H3BMM0 161 aa5.1□□□□□ -1.59
VPS50-218ENST00000485994 ISLRO14498 428 aa5.1□□□□□ -1.59
VPS50-218ENST00000485994 SOCS3O14543 225 aa5.1□□□□□ -1.59
VPS50-218ENST00000485994 DEDDO75618 318 aa5.1□□□□□ -1.59
VPS50-218ENST00000485994 CA1P00915 261 aaPredicted RBP5.1□□□□□ -1.59
VPS50-218ENST00000485994 IL5P05113 134 aa5.1□□□□□ -1.59
VPS50-218ENST00000485994 ZNF688P0C7X2 276 aa5.1□□□□□ -1.59
VPS50-218ENST00000485994 MIFP14174 115 aa5.1□□□□□ -1.59
VPS50-218ENST00000485994 ID1P41134 155 aa5.1□□□□□ -1.59
VPS50-218ENST00000485994 IAH1Q2TAA2 248 aaPredicted RBP5.1□□□□□ -1.59
VPS50-218ENST00000485994 PXDC1Q5TGL8 231 aa5.1□□□□□ -1.59
VPS50-218ENST00000485994 LEMD1Q68G75 181 aa5.1□□□□□ -1.59
VPS50-218ENST00000485994 KRTAP5-3Q6L8H2 238 aa5.1□□□□□ -1.59
VPS50-218ENST00000485994 CEMP1Q6PRD7 247 aaPredicted RBP5.1□□□□□ -1.59
VPS50-218ENST00000485994 S100A7AQ86SG5 101 aa5.1□□□□□ -1.59
VPS50-218ENST00000485994 BPIFCQ8NFQ6 507 aa5.1□□□□□ -1.59
VPS50-218ENST00000485994 OR10P1Q8NGE3 313 aa5.1□□□□□ -1.59
VPS50-218ENST00000485994 OR11H2Q8NH07 326 aa5.1□□□□□ -1.59
VPS50-218ENST00000485994 ZNF431Q8TF32 576 aaPredicted RBP5.1□□□□□ -1.59
VPS50-218ENST00000485994 NEU1Q99519 415 aa5.1□□□□□ -1.59
VPS50-218ENST00000485994 PBDC1Q9BVG4 233 aa5.1□□□□□ -1.59
VPS50-218ENST00000485994 C1QTNF4Q9BXJ3 329 aa5.1□□□□□ -1.59
VPS50-218ENST00000485994 MFFQ9GZY8 342 aa5.1□□□□□ -1.59
VPS50-218ENST00000485994 C20orf85Q9H1P6 137 aa5.1□□□□□ -1.59
VPS50-218ENST00000485994 HRH4Q9H3N8 390 aa5.1□□□□□ -1.59
VPS50-218ENST00000485994 RNF24Q9Y225 148 aa5.1□□□□□ -1.59
VPS50-218ENST00000485994 KMT2AQ03164 3969 aa5.1□□□□□ -1.59
VPS50-218ENST00000485994 C7orf66A4D0T2 115 aa5.09□□□□□ -1.59
VPS50-218ENST00000485994 ZNF98A6NK75 572 aa5.09□□□□□ -1.59
VPS50-218ENST00000485994 A8MTW9 85 aa5.09□□□□□ -1.59
VPS50-218ENST00000485994 JTBO76095 146 aa5.09□□□□□ -1.59
VPS50-218ENST00000485994 MBPP02686 304 aaPredicted RBP5.09□□□□□ -1.59
VPS50-218ENST00000485994 HLA-DRB4P13762 266 aa5.09□□□□□ -1.59
VPS50-218ENST00000485994 PSMB3P49720 205 aa5.09□□□□□ -1.59
VPS50-218ENST00000485994 TCTAP57738 103 aa5.09□□□□□ -1.59
VPS50-218ENST00000485994 LYZP61626 148 aa5.09□□□□□ -1.59
VPS50-218ENST00000485994 EWSR1Q01844 656 aaKnown RBP eCLIP5.09□□□□□ -1.59
VPS50-218ENST00000485994 PSMG4Q5JS54 123 aa5.09□□□□□ -1.59
VPS50-218ENST00000485994 TMEM182Q6ZP80 229 aaPredicted RBP5.09□□□□□ -1.59
VPS50-218ENST00000485994 CYP2G1PQ6ZSU1 146 aa5.09□□□□□ -1.59
VPS50-218ENST00000485994 ACOT7LQ6ZUV0 252 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms