RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 THAP8Q8NA92 274 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 TMEM116Q8NCL8 245 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 OR5R1Q8NH85 324 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 OR4F4Q96R69 305 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 TRGV9Q99603 122 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 CITED1Q99966 193 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 SLC25A33Q9BSK2 321 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 TMPRSS5Q9H3S3 457 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 FNDC4Q9H6D8 234 aaPredicted RBP5.44□□□□□ -1.54
BRCA1-216ENST00000484087 DNAJC4Q9NNZ3 241 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 TMEM167BQ9NRX6 74 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 FUT9Q9Y231 359 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 PRELID1Q9Y255 219 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 IGKV1OR2-108A0A075B7D4 117 aa5.43□□□□□ -1.54
BRCA1-216ENST00000484087 NPIPB5A8MRT5 1133 aa5.43□□□□□ -1.54
BRCA1-216ENST00000484087 B4DEV8 164 aa5.43□□□□□ -1.54
BRCA1-216ENST00000484087 C11orf94C9JXX5 98 aa5.43□□□□□ -1.54
BRCA1-216ENST00000484087 H3BQ15 152 aa5.43□□□□□ -1.54
BRCA1-216ENST00000484087 DNASE2O00115 360 aaPredicted RBP5.43□□□□□ -1.54
BRCA1-216ENST00000484087 PAGE4O60829 102 aa5.43□□□□□ -1.54
BRCA1-216ENST00000484087 EIF3GO75821 320 aaKnown RBP eCLIP5.43□□□□□ -1.54
BRCA1-216ENST00000484087 HLA-DRB1P01911 266 aa5.43□□□□□ -1.54
BRCA1-216ENST00000484087 OR5G3P0C626 314 aa5.43□□□□□ -1.54
BRCA1-216ENST00000484087 ARL14EPLP0DKL9 152 aa5.43□□□□□ -1.54
BRCA1-216ENST00000484087 C8orf88P0DMB2 117 aa5.43□□□□□ -1.54
BRCA1-216ENST00000484087 HIST1H1BP16401 226 aaKnown RBP5.43□□□□□ -1.54
BRCA1-216ENST00000484087 GCHFRP30047 84 aa5.43□□□□□ -1.54
BRCA1-216ENST00000484087 CX3CL1P78423 397 aa5.43□□□□□ -1.54
BRCA1-216ENST00000484087 C10orf113Q5VZT2 155 aa5.43□□□□□ -1.54
BRCA1-216ENST00000484087 CDPF1Q6NVV7 123 aa5.43□□□□□ -1.54
BRCA1-216ENST00000484087 STXBP6Q8NFX7 210 aa5.43□□□□□ -1.54
BRCA1-216ENST00000484087 TMEM68Q96MH6 324 aa5.43□□□□□ -1.54
BRCA1-216ENST00000484087 UHRF2Q96PU4 802 aa5.43□□□□□ -1.54
BRCA1-216ENST00000484087 SEPSECSQ9HD40 501 aaKnown RBP5.43□□□□□ -1.54
BRCA1-216ENST00000484087 ARL2-SNX15V9GYD0 113 aa5.43□□□□□ -1.54
BRCA1-216ENST00000484087 TRAV30A0A087WSZ9 112 aa5.42□□□□□ -1.54
BRCA1-216ENST00000484087 C7orf77A4D0Y5 90 aa5.42□□□□□ -1.54
BRCA1-216ENST00000484087 NUPL2O15504 423 aaKnown RBP5.42□□□□□ -1.54
BRCA1-216ENST00000484087 OR7C2O60412 319 aa5.42□□□□□ -1.54
BRCA1-216ENST00000484087 IGHV3-48P01763 117 aa5.42□□□□□ -1.54
BRCA1-216ENST00000484087 AMY1AP04745 511 aa5.42□□□□□ -1.54
BRCA1-216ENST00000484087 CD28P10747 220 aa5.42□□□□□ -1.54
BRCA1-216ENST00000484087 GATA2P23769 480 aaPredicted RBP5.42□□□□□ -1.54
BRCA1-216ENST00000484087 CD81P60033 236 aa5.42□□□□□ -1.54
BRCA1-216ENST00000484087 UBE2G2P60604 165 aa5.42□□□□□ -1.54
BRCA1-216ENST00000484087 SSBP2P81877 361 aaPredicted RBP5.42□□□□□ -1.54
BRCA1-216ENST00000484087 ZNF674Q2M3X9 581 aa5.42□□□□□ -1.54
BRCA1-216ENST00000484087 C9orf152Q5JTZ5 239 aa5.42□□□□□ -1.54
BRCA1-216ENST00000484087 FAM90A2PQ658T7 463 aa5.42□□□□□ -1.54
BRCA1-216ENST00000484087 TMEM88Q6PEY1 159 aa5.42□□□□□ -1.54
BRCA1-216ENST00000484087 MIR17HGQ75NE6 70 aa5.42□□□□□ -1.54
BRCA1-216ENST00000484087 C1QL4Q86Z23 238 aa5.42□□□□□ -1.54
BRCA1-216ENST00000484087 TTC9CQ8N5M4 171 aa5.42□□□□□ -1.54
BRCA1-216ENST00000484087 Q8N9W7 124 aa5.42□□□□□ -1.54
BRCA1-216ENST00000484087 OR4X1Q8NH49 305 aa5.42□□□□□ -1.54
BRCA1-216ENST00000484087 FAM110DQ8TAY7 271 aaPredicted RBP5.42□□□□□ -1.54
BRCA1-216ENST00000484087 RBM14Q96PK6 669 aaKnown RBP5.42□□□□□ -1.54
BRCA1-216ENST00000484087 SMIM7Q9BQ49 75 aa5.42□□□□□ -1.54
BRCA1-216ENST00000484087 FAM103A1Q9BTL3 118 aaKnown RBP5.42□□□□□ -1.54
BRCA1-216ENST00000484087 C20orf24Q9BUV8 137 aa5.42□□□□□ -1.54
BRCA1-216ENST00000484087 C16orf95Q9H693 158 aa5.42□□□□□ -1.54
BRCA1-216ENST00000484087 SERTAD4Q9NUC0 356 aa5.42□□□□□ -1.54
BRCA1-216ENST00000484087 NAT8Q9UHE5 227 aa5.42□□□□□ -1.54
BRCA1-216ENST00000484087 LINC00527Q9UJ94 153 aa5.42□□□□□ -1.54
BRCA1-216ENST00000484087 MOB4Q9Y3A3 225 aa5.42□□□□□ -1.54
BRCA1-216ENST00000484087 A0A087WWC5 75 aa5.41□□□□□ -1.54
BRCA1-216ENST00000484087 A0A1W2PRX2 142 aa5.41□□□□□ -1.54
BRCA1-216ENST00000484087 FAM74A7A6NL05 159 aa5.41□□□□□ -1.54
BRCA1-216ENST00000484087 I3L2K1 104 aa5.41□□□□□ -1.54
BRCA1-216ENST00000484087 HYPMO75409 117 aa5.41□□□□□ -1.54
BRCA1-216ENST00000484087 ORM2P19652 201 aa5.41□□□□□ -1.54
BRCA1-216ENST00000484087 S100A7P31151 101 aa5.41□□□□□ -1.54
BRCA1-216ENST00000484087 MFAP2P55001 183 aa5.41□□□□□ -1.54
BRCA1-216ENST00000484087 MFAP4P55083 255 aa5.41□□□□□ -1.54
BRCA1-216ENST00000484087 ZNF90Q03938 601 aa5.41□□□□□ -1.54
BRCA1-216ENST00000484087 TMEM241Q24JQ0 296 aa5.41□□□□□ -1.54
BRCA1-216ENST00000484087 NSUN5P1Q3KNT7 163 aa5.41□□□□□ -1.54
BRCA1-216ENST00000484087 PRR31Q5SQ13 230 aa5.41□□□□□ -1.54
BRCA1-216ENST00000484087 CBLN2Q8IUK8 224 aa5.41□□□□□ -1.54
BRCA1-216ENST00000484087 C15orf54Q8N8G6 183 aa5.41□□□□□ -1.54
BRCA1-216ENST00000484087 OR1B1Q8NGR6 318 aa5.41□□□□□ -1.54
BRCA1-216ENST00000484087 RPUSD4Q96CM3 377 aaKnown RBP5.41□□□□□ -1.54
BRCA1-216ENST00000484087 KRTAP4-9Q9BYQ8 210 aa5.41□□□□□ -1.54
BRCA1-216ENST00000484087 NPFFR1Q9GZQ6 430 aa5.41□□□□□ -1.54
BRCA1-216ENST00000484087 TUBA4BQ9H853 241 aa5.41□□□□□ -1.54
BRCA1-216ENST00000484087 DOK5Q9P104 306 aa5.41□□□□□ -1.54
BRCA1-216ENST00000484087 PITPNC1Q9UKF7 332 aa5.41□□□□□ -1.54
BRCA1-216ENST00000484087 PRKDCP78527 4128 aaKnown RBP5.41□□□□□ -1.54
BRCA1-216ENST00000484087 NOTCH1P46531 2555 aa5.41□□□□□ -1.54
BRCA1-216ENST00000484087 IGKV1D-37A0A075B6S9 117 aa5.4□□□□□ -1.54
BRCA1-216ENST00000484087 IGHV3-21A0A0B4J1V1 117 aa5.4□□□□□ -1.54
BRCA1-216ENST00000484087 IGHV7-81A0A0B4J1V7 117 aa5.4□□□□□ -1.54
BRCA1-216ENST00000484087 LINC01548A6NM66 108 aa5.4□□□□□ -1.54
BRCA1-216ENST00000484087 M0QZK8 103 aa5.4□□□□□ -1.54
BRCA1-216ENST00000484087 GNG7O60262 68 aa5.4□□□□□ -1.54
BRCA1-216ENST00000484087 RD3LP0DJH9 198 aa5.4□□□□□ -1.54
BRCA1-216ENST00000484087 PLP1P60201 277 aa5.4□□□□□ -1.54
BRCA1-216ENST00000484087 RPL15P61313 204 aaKnown RBP5.4□□□□□ -1.54
BRCA1-216ENST00000484087 UBE2L3P68036 154 aaKnown RBP5.4□□□□□ -1.54
BRCA1-216ENST00000484087 SPATA31B1PQ5VZV4 182 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms