RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 PTPRZ1P23471 2315 aaPredicted RBP9.34□□□□□ -0.91
SEC61A1-205ENST00000483956 AHCTF1Q8WYP5 2266 aa9.34□□□□□ -0.91
SEC61A1-205ENST00000483956 K7EMI3 77 aa9.34□□□□□ -0.91
SEC61A1-205ENST00000483956 NMUP48645 174 aa9.34□□□□□ -0.91
SEC61A1-205ENST00000483956 EDDM3AQ14507 147 aa9.34□□□□□ -0.91
SEC61A1-205ENST00000483956 CDIP1Q9H305 208 aa9.34□□□□□ -0.91
SEC61A1-205ENST00000483956 URB1O60287 2271 aaKnown RBP9.34□□□□□ -0.91
SEC61A1-205ENST00000483956 FRYQ5TBA9 3013 aa9.34□□□□□ -0.91
SEC61A1-205ENST00000483956 VSTM5A8MXK1 200 aa9.34□□□□□ -0.91
SEC61A1-205ENST00000483956 TNFRSF13BO14836 293 aaPredicted RBP9.34□□□□□ -0.91
SEC61A1-205ENST00000483956 HSPE1P61604 102 aaKnown RBP9.34□□□□□ -0.91
SEC61A1-205ENST00000483956 AMTNQ6UX39 209 aa9.34□□□□□ -0.91
SEC61A1-205ENST00000483956 ZADH2Q8N4Q0 377 aa9.34□□□□□ -0.91
SEC61A1-205ENST00000483956 SYT8Q8NBV8 401 aa9.34□□□□□ -0.91
SEC61A1-205ENST00000483956 OR8A1Q8NGG7 326 aa9.34□□□□□ -0.91
SEC61A1-205ENST00000483956 LINC00312Q9Y6C7 94 aa9.34□□□□□ -0.91
SEC61A1-205ENST00000483956 RIF1Q5UIP0 2472 aaKnown RBP9.33□□□□□ -0.92
SEC61A1-205ENST00000483956 MED13Q9UHV7 2174 aa9.33□□□□□ -0.92
SEC61A1-205ENST00000483956 TEX50A0A1B0GTY4 177 aa9.33□□□□□ -0.92
SEC61A1-205ENST00000483956 KIR2DL2P43627 348 aaPredicted RBP9.33□□□□□ -0.92
SEC61A1-205ENST00000483956 ZNF134P52741 427 aa9.33□□□□□ -0.92
SEC61A1-205ENST00000483956 MZT1Q08AG7 82 aa9.33□□□□□ -0.92
SEC61A1-205ENST00000483956 GAGE5Q13069 117 aa9.33□□□□□ -0.92
SEC61A1-205ENST00000483956 GAGE6Q13070 117 aa9.33□□□□□ -0.92
SEC61A1-205ENST00000483956 BCL6BQ8N143 479 aaPredicted RBP9.33□□□□□ -0.92
SEC61A1-205ENST00000483956 TTC9CQ8N5M4 171 aa9.33□□□□□ -0.92
SEC61A1-205ENST00000483956 DPF1Q92782 380 aa9.33□□□□□ -0.92
SEC61A1-205ENST00000483956 FAM234AQ9H0X4 552 aa9.33□□□□□ -0.92
SEC61A1-205ENST00000483956 C19orf67A6NJJ6 358 aa9.33□□□□□ -0.92
SEC61A1-205ENST00000483956 SIVA1O15304 175 aa9.33□□□□□ -0.92
SEC61A1-205ENST00000483956 MBNL2Q5VZF2 373 aaKnown RBP9.33□□□□□ -0.92
SEC61A1-205ENST00000483956 SMIM20Q8N5G0 67 aa9.33□□□□□ -0.92
SEC61A1-205ENST00000483956 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.33□□□□□ -0.92
SEC61A1-205ENST00000483956 C1orf162Q8NEQ5 155 aaPredicted RBP9.33□□□□□ -0.92
SEC61A1-205ENST00000483956 PGLYRP4Q96LB8 373 aa9.33□□□□□ -0.92
SEC61A1-205ENST00000483956 SRSF8Q9BRL6 282 aaKnown RBP9.33□□□□□ -0.92
SEC61A1-205ENST00000483956 CYSLTR1Q9Y271 337 aa9.33□□□□□ -0.92
SEC61A1-205ENST00000483956 IGKV1D-17A0A075B6S4 117 aa9.32□□□□□ -0.92
SEC61A1-205ENST00000483956 SRRM5B3KS81 715 aa9.32□□□□□ -0.92
SEC61A1-205ENST00000483956 POU2AF1Q16633 256 aa9.32□□□□□ -0.92
SEC61A1-205ENST00000483956 TMEM164Q5U3C3 297 aa9.32□□□□□ -0.92
SEC61A1-205ENST00000483956 PPP1R35Q8TAP8 253 aa9.32□□□□□ -0.92
SEC61A1-205ENST00000483956 PHLDA1Q8WV24 401 aaPredicted RBP9.32□□□□□ -0.92
SEC61A1-205ENST00000483956 NABP2Q9BQ15 211 aa9.32□□□□□ -0.92
SEC61A1-205ENST00000483956 A0A1W2PNU3 283 aaPredicted RBP9.32□□□□□ -0.92
SEC61A1-205ENST00000483956 PPIFP30405 207 aaKnown RBP9.32□□□□□ -0.92
SEC61A1-205ENST00000483956 ANAPC13Q9BS18 74 aa9.32□□□□□ -0.92
SEC61A1-205ENST00000483956 ENY2Q9NPA8 101 aa9.32□□□□□ -0.92
SEC61A1-205ENST00000483956 SIGLEC8Q9NYZ4 499 aa9.32□□□□□ -0.92
SEC61A1-205ENST00000483956 CACNA1HO95180 2353 aa9.32□□□□□ -0.92
SEC61A1-205ENST00000483956 ZNF883P0CG24 379 aa9.31□□□□□ -0.92
SEC61A1-205ENST00000483956 XGP55808 180 aa9.31□□□□□ -0.92
SEC61A1-205ENST00000483956 OSR1Q8TAX0 266 aaPredicted RBP9.31□□□□□ -0.92
SEC61A1-205ENST00000483956 SGK494Q96LW2 274 aa9.31□□□□□ -0.92
SEC61A1-205ENST00000483956 HIF1ANQ9NWT6 349 aa9.31□□□□□ -0.92
SEC61A1-205ENST00000483956 NHP2Q9NX24 153 aaKnown RBP9.31□□□□□ -0.92
SEC61A1-205ENST00000483956 UFC1Q9Y3C8 167 aa9.31□□□□□ -0.92
SEC61A1-205ENST00000483956 A0A1B0GW15 77 aa9.31□□□□□ -0.92
SEC61A1-205ENST00000483956 CHEK1O14757 476 aa9.31□□□□□ -0.92
SEC61A1-205ENST00000483956 APOHP02749 345 aaPredicted RBP9.31□□□□□ -0.92
SEC61A1-205ENST00000483956 CFHR2P36980 270 aa9.31□□□□□ -0.92
SEC61A1-205ENST00000483956 FHL3Q13643 280 aa9.31□□□□□ -0.92
SEC61A1-205ENST00000483956 NDFIP1Q9BT67 221 aa9.31□□□□□ -0.92
SEC61A1-205ENST00000483956 HINT2Q9BX68 163 aa9.31□□□□□ -0.92
SEC61A1-205ENST00000483956 AP5S1Q9NUS5 200 aa9.31□□□□□ -0.92
SEC61A1-205ENST00000483956 AMMECR1Q9Y4X0 333 aaPredicted RBP9.31□□□□□ -0.92
SEC61A1-205ENST00000483956 CECR9P0C854 216 aa9.31□□□□□ -0.92
SEC61A1-205ENST00000483956 CT45A6P0DMU7 189 aa9.31□□□□□ -0.92
SEC61A1-205ENST00000483956 CT45A5P0DMU8 189 aa9.31□□□□□ -0.92
SEC61A1-205ENST00000483956 CT45A7P0DMV0 189 aa9.31□□□□□ -0.92
SEC61A1-205ENST00000483956 ATP5IP56385 69 aaPredicted RBP9.31□□□□□ -0.92
SEC61A1-205ENST00000483956 CT45A1Q5HYN5 189 aa9.31□□□□□ -0.92
SEC61A1-205ENST00000483956 C1orf229Q6ZS94 237 aaPredicted RBP9.31□□□□□ -0.92
SEC61A1-205ENST00000483956 CT45A3Q8NHU0 189 aa9.31□□□□□ -0.92
SEC61A1-205ENST00000483956 CALYQ9NYX4 217 aa9.31□□□□□ -0.92
SEC61A1-205ENST00000483956 E9PLD3 99 aa9.3□□□□□ -0.92
SEC61A1-205ENST00000483956 IGLV1-44P01699 117 aa9.3□□□□□ -0.92
SEC61A1-205ENST00000483956 CLEC3BP05452 202 aa9.3□□□□□ -0.92
SEC61A1-205ENST00000483956 CGB3P0DN86 165 aa9.3□□□□□ -0.92
SEC61A1-205ENST00000483956 CGB7P0DN87 165 aa9.3□□□□□ -0.92
SEC61A1-205ENST00000483956 CACNG7P62955 275 aa9.3□□□□□ -0.92
SEC61A1-205ENST00000483956 GAGE13Q4V321 117 aa9.3□□□□□ -0.92
SEC61A1-205ENST00000483956 TM2D2Q9BX73 214 aa9.3□□□□□ -0.92
SEC61A1-205ENST00000483956 RAB9BQ9NP90 201 aa9.3□□□□□ -0.92
SEC61A1-205ENST00000483956 CNOT1A5YKK6 2376 aaKnown RBP9.3□□□□□ -0.92
SEC61A1-205ENST00000483956 RPL32P62910 135 aaKnown RBP9.3□□□□□ -0.92
SEC61A1-205ENST00000483956 Q6ZUT4 128 aa9.3□□□□□ -0.92
SEC61A1-205ENST00000483956 C7orf69Q9H7B7 122 aa9.3□□□□□ -0.92
SEC61A1-205ENST00000483956 RALYQ9UKM9 306 aaKnown RBP9.3□□□□□ -0.92
SEC61A1-205ENST00000483956 PRNDQ9UKY0 176 aa9.3□□□□□ -0.92
SEC61A1-205ENST00000483956 FZR1Q9UM11 496 aa9.3□□□□□ -0.92
SEC61A1-205ENST00000483956 A0A1B0GWB2 263 aa9.29□□□□□ -0.92
SEC61A1-205ENST00000483956 APOMO95445 188 aa9.29□□□□□ -0.92
SEC61A1-205ENST00000483956 FAM106CPP0CH98 169 aa9.29□□□□□ -0.92
SEC61A1-205ENST00000483956 SAA2P0DJI9 122 aaPredicted RBP9.29□□□□□ -0.92
SEC61A1-205ENST00000483956 FAM106AQ4KMX7 169 aa9.29□□□□□ -0.92
SEC61A1-205ENST00000483956 TMEM178AQ8NBL3 297 aa9.29□□□□□ -0.92
SEC61A1-205ENST00000483956 TTTY13Q9BZ97 58 aa9.29□□□□□ -0.92
SEC61A1-205ENST00000483956 PRO0461Q9UI25 63 aa9.29□□□□□ -0.92
SEC61A1-205ENST00000483956 TRAV5A0A0B4J249 113 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 3961.3 ms