RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 ZNF503Q96F45 646 aa20.53■□□□□ 0.88
SHOX2-204ENST00000483851 ATP6V0BQ99437 205 aa20.53■□□□□ 0.88
SHOX2-204ENST00000483851 SLC25A2Q9BXI2 301 aa20.53■□□□□ 0.88
SHOX2-204ENST00000483851 G3V318 75 aa20.52■□□□□ 0.88
SHOX2-204ENST00000483851 NDUFB4O95168 129 aa20.52■□□□□ 0.88
SHOX2-204ENST00000483851 C12orf57Q99622 126 aa20.52■□□□□ 0.88
SHOX2-204ENST00000483851 CSPG4Q6UVK1 2322 aa20.52■□□□□ 0.88
SHOX2-204ENST00000483851 F8W735 103 aaPredicted RBP20.52■□□□□ 0.87
SHOX2-204ENST00000483851 S100A8P05109 93 aa20.52■□□□□ 0.87
SHOX2-204ENST00000483851 Q56UQ5 140 aa20.52■□□□□ 0.87
SHOX2-204ENST00000483851 S100A7AQ86SG5 101 aa20.52■□□□□ 0.87
SHOX2-204ENST00000483851 LINC01551Q86U37 167 aa20.52■□□□□ 0.87
SHOX2-204ENST00000483851 DERL1Q9BUN8 251 aa20.52■□□□□ 0.87
SHOX2-204ENST00000483851 MDFIC2A0A1B0GVS7 189 aa20.51■□□□□ 0.87
SHOX2-204ENST00000483851 H3BUA1 57 aa20.51■□□□□ 0.87
SHOX2-204ENST00000483851 H7BYZ3 331 aa20.51■□□□□ 0.87
SHOX2-204ENST00000483851 TRGC2P03986 189 aa20.51■□□□□ 0.87
SHOX2-204ENST00000483851 Q6YL49 198 aa20.51■□□□□ 0.87
SHOX2-204ENST00000483851 OR5AU1Q8NGC0 362 aa20.51■□□□□ 0.87
SHOX2-204ENST00000483851 HIGD1AQ9Y241 93 aa20.51■□□□□ 0.87
SHOX2-204ENST00000483851 HIST1H2BKO60814 126 aa20.5■□□□□ 0.87
SHOX2-204ENST00000483851 HIST1H2BJP06899 126 aa20.5■□□□□ 0.87
SHOX2-204ENST00000483851 HOXA5P20719 270 aa20.5■□□□□ 0.87
SHOX2-204ENST00000483851 HIST1H2BOP23527 126 aa20.5■□□□□ 0.87
SHOX2-204ENST00000483851 HIST1H2BBP33778 126 aa20.5■□□□□ 0.87
SHOX2-204ENST00000483851 HIST1H2BDP58876 126 aa20.5■□□□□ 0.87
SHOX2-204ENST00000483851 HIST1H2BCP62807 126 aa20.5■□□□□ 0.87
SHOX2-204ENST00000483851 RHOGP84095 191 aa20.5■□□□□ 0.87
SHOX2-204ENST00000483851 HIST2H2BEQ16778 126 aa20.5■□□□□ 0.87
SHOX2-204ENST00000483851 HIST2H2BFQ5QNW6 126 aaPredicted RBP20.5■□□□□ 0.87
SHOX2-204ENST00000483851 HIST1H2BHQ93079 126 aa20.5■□□□□ 0.87
SHOX2-204ENST00000483851 HIST1H2BNQ99877 126 aa20.5■□□□□ 0.87
SHOX2-204ENST00000483851 HIST1H2BMQ99879 126 aa20.5■□□□□ 0.87
SHOX2-204ENST00000483851 MRPL27Q9P0M9 148 aaKnown RBP20.5■□□□□ 0.87
SHOX2-204ENST00000483851 IGHV4-59P01825 116 aa20.5■□□□□ 0.87
SHOX2-204ENST00000483851 C15orf32Q32M92 178 aa20.5■□□□□ 0.87
SHOX2-204ENST00000483851 C9orf152Q5JTZ5 239 aa20.5■□□□□ 0.87
SHOX2-204ENST00000483851 ZNF502Q8TBZ5 544 aa20.5■□□□□ 0.87
SHOX2-204ENST00000483851 C11orf52Q96A22 123 aa20.5■□□□□ 0.87
SHOX2-204ENST00000483851 UHRF2Q96PU4 802 aa20.5■□□□□ 0.87
SHOX2-204ENST00000483851 A0A1W2PRE2 83 aa20.49■□□□□ 0.87
SHOX2-204ENST00000483851 FAM223BA6NKX1 122 aa20.49■□□□□ 0.87
SHOX2-204ENST00000483851 CD99P14209 185 aa20.49■□□□□ 0.87
SHOX2-204ENST00000483851 MORN5Q5VZ52 161 aa20.49■□□□□ 0.87
SHOX2-204ENST00000483851 FAM223AQ8IWN6 122 aa20.49■□□□□ 0.87
SHOX2-204ENST00000483851 OR51M1Q9H341 326 aa20.49■□□□□ 0.87
SHOX2-204ENST00000483851 WI2-2373I1.2A0A1W2PRP0 233 aa20.48■□□□□ 0.87
SHOX2-204ENST00000483851 LYZP61626 148 aa20.48■□□□□ 0.87
SHOX2-204ENST00000483851 ZNF491Q8N8L2 437 aa20.48■□□□□ 0.87
SHOX2-204ENST00000483851 PAXXQ9BUH6 204 aa20.48■□□□□ 0.87
SHOX2-204ENST00000483851 TRBV20OR9-2A0A075B6H5 130 aa20.47■□□□□ 0.87
SHOX2-204ENST00000483851 TRBV7-1A0A0A6YYK4 115 aa20.47■□□□□ 0.87
SHOX2-204ENST00000483851 TRAV5A0A0B4J249 113 aa20.47■□□□□ 0.87
SHOX2-204ENST00000483851 GALR1P47211 349 aa20.47■□□□□ 0.87
SHOX2-204ENST00000483851 SCO2A0A1W2PP80 73 aa20.47■□□□□ 0.87
SHOX2-204ENST00000483851 UBE2L3P68036 154 aaKnown RBP20.47■□□□□ 0.87
SHOX2-204ENST00000483851 CIARTQ8N365 385 aaPredicted RBP20.47■□□□□ 0.87
SHOX2-204ENST00000483851 EEF1AKMT3Q96AZ1 226 aa20.47■□□□□ 0.87
SHOX2-204ENST00000483851 RNF125Q96EQ8 232 aa20.47■□□□□ 0.87
SHOX2-204ENST00000483851 SRD5A3Q9H8P0 318 aa20.47■□□□□ 0.87
SHOX2-204ENST00000483851 VPREB3Q9UKI3 123 aa20.47■□□□□ 0.87
SHOX2-204ENST00000483851 CTSGP08311 255 aa20.46■□□□□ 0.87
SHOX2-204ENST00000483851 BLCAPP62952 87 aa20.46■□□□□ 0.87
SHOX2-204ENST00000483851 FRZBQ92765 325 aa20.46■□□□□ 0.87
SHOX2-204ENST00000483851 ELOVL1Q9BW60 279 aa20.46■□□□□ 0.87
SHOX2-204ENST00000483851 SMIM6P0DI80 62 aa20.45■□□□□ 0.86
SHOX2-204ENST00000483851 PPIFP30405 207 aaKnown RBP20.45■□□□□ 0.86
SHOX2-204ENST00000483851 S4R3C0 116 aa20.45■□□□□ 0.86
SHOX2-204ENST00000483851 GGCTO75223 188 aaKnown RBP20.45■□□□□ 0.86
SHOX2-204ENST00000483851 SRP14P37108 136 aaKnown RBP20.45■□□□□ 0.86
SHOX2-204ENST00000483851 OR5B12Q96R08 314 aa20.45■□□□□ 0.86
SHOX2-204ENST00000483851 TCEAL7Q9BRU2 100 aa20.45■□□□□ 0.86
SHOX2-204ENST00000483851 SLC25A39Q9BZJ4 359 aaPredicted RBP20.45■□□□□ 0.86
SHOX2-204ENST00000483851 RNF24Q9Y225 148 aa20.45■□□□□ 0.86
SHOX2-204ENST00000483851 S100PP25815 95 aa20.44■□□□□ 0.86
SHOX2-204ENST00000483851 TMEM14CQ9P0S9 112 aa20.44■□□□□ 0.86
SHOX2-204ENST00000483851 SVEP1Q4LDE5 3571 aa20.44■□□□□ 0.86
SHOX2-204ENST00000483851 IL4P05112 153 aa20.43■□□□□ 0.86
SHOX2-204ENST00000483851 OR10J4P0C629 311 aa20.43■□□□□ 0.86
SHOX2-204ENST00000483851 TRGC1P0CF51 173 aa20.43■□□□□ 0.86
SHOX2-204ENST00000483851 S100A7P31151 101 aa20.43■□□□□ 0.86
SHOX2-204ENST00000483851 CDX1P47902 265 aaPredicted RBP20.43■□□□□ 0.86
SHOX2-204ENST00000483851 ATP5G2Q06055 141 aa20.43■□□□□ 0.86
SHOX2-204ENST00000483851 FXYD5Q96DB9 178 aa20.43■□□□□ 0.86
SHOX2-204ENST00000483851 OR2T8A6NH00 312 aa20.43■□□□□ 0.86
SHOX2-204ENST00000483851 IFITM10A6NMD0 228 aa20.43■□□□□ 0.86
SHOX2-204ENST00000483851 NDUFA6P56556 154 aa20.43■□□□□ 0.86
SHOX2-204ENST00000483851 SHANK2-AS3Q9BTD1 123 aa20.43■□□□□ 0.86
SHOX2-204ENST00000483851 PDZD2O15018 2839 aa20.42■□□□□ 0.86
SHOX2-204ENST00000483851 UNC79Q9P2D8 2635 aa20.42■□□□□ 0.86
SHOX2-204ENST00000483851 H3BRN7 92 aa20.41■□□□□ 0.86
SHOX2-204ENST00000483851 SMAD7O15105 426 aaKnown RBP20.41■□□□□ 0.86
SHOX2-204ENST00000483851 TYMSP04818 313 aa20.41■□□□□ 0.86
SHOX2-204ENST00000483851 ZNF600Q6ZNG1 722 aa20.41■□□□□ 0.86
SHOX2-204ENST00000483851 TMEM190Q8WZ59 177 aa20.41■□□□□ 0.86
SHOX2-204ENST00000483851 USMG5Q96IX5 58 aa20.41■□□□□ 0.86
SHOX2-204ENST00000483851 IMMP2LQ96T52 175 aa20.41■□□□□ 0.86
SHOX2-204ENST00000483851 GCN1Q92616 2671 aaKnown RBP20.41■□□□□ 0.86
SHOX2-204ENST00000483851 PGPEP1LA6NFU8 196 aa20.41■□□□□ 0.86
SHOX2-204ENST00000483851 C9JCJ5 164 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms