RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 HIST1H2BMQ99879 126 aa13.52□□□□□ -0.25
MRPL28-210ENST00000483764 FAM103A1Q9BTL3 118 aaKnown RBP13.52□□□□□ -0.25
MRPL28-210ENST00000483764 GSX1Q9H4S2 264 aaPredicted RBP13.52□□□□□ -0.25
MRPL28-210ENST00000483764 SEPSECSQ9HD40 501 aaKnown RBP13.52□□□□□ -0.25
MRPL28-210ENST00000483764 GAR1Q9NY12 217 aaKnown RBP13.52□□□□□ -0.25
MRPL28-210ENST00000483764 HIVEP1P15822 2718 aa13.52□□□□□ -0.25
MRPL28-210ENST00000483764 APELAP0DMC3 54 aa13.51□□□□□ -0.25
MRPL28-210ENST00000483764 SRD5A1P18405 259 aa13.51□□□□□ -0.25
MRPL28-210ENST00000483764 NDUFA6P56556 154 aa13.51□□□□□ -0.25
MRPL28-210ENST00000483764 Q71RC1 249 aaPredicted RBP13.51□□□□□ -0.25
MRPL28-210ENST00000483764 TMEM86BQ8N661 226 aa13.51□□□□□ -0.25
MRPL28-210ENST00000483764 DNAJC4Q9NNZ3 241 aa13.51□□□□□ -0.25
MRPL28-210ENST00000483764 TCRBV4S1A1TA0A5B7 111 aa13.5□□□□□ -0.25
MRPL28-210ENST00000483764 REG1AP05451 166 aa13.5□□□□□ -0.25
MRPL28-210ENST00000483764 EGR2P11161 476 aaPredicted RBP13.5□□□□□ -0.25
MRPL28-210ENST00000483764 BLCAPP62952 87 aa13.5□□□□□ -0.25
MRPL28-210ENST00000483764 OR1L6Q8NGR2 347 aa13.5□□□□□ -0.25
MRPL28-210ENST00000483764 SFRP2Q96HF1 295 aa13.5□□□□□ -0.25
MRPL28-210ENST00000483764 ANK3Q12955 4377 aaKnown RBP13.5□□□□□ -0.25
MRPL28-210ENST00000483764 PLXNB1O43157 2135 aa13.5□□□□□ -0.25
MRPL28-210ENST00000483764 HIVEP2P31629 2446 aa13.5□□□□□ -0.25
MRPL28-210ENST00000483764 LINC01548A6NM66 108 aa13.49□□□□□ -0.25
MRPL28-210ENST00000483764 COA6Q5JTJ3 125 aaKnown RBP13.49□□□□□ -0.25
MRPL28-210ENST00000483764 C9orf152Q5JTZ5 239 aa13.49□□□□□ -0.25
MRPL28-210ENST00000483764 OR1P1Q8NH06 330 aa13.49□□□□□ -0.25
MRPL28-210ENST00000483764 PHOX2AO14813 284 aa13.49□□□□□ -0.25
MRPL28-210ENST00000483764 CRYGCP07315 174 aa13.49□□□□□ -0.25
MRPL28-210ENST00000483764 TRGC1P0CF51 173 aa13.49□□□□□ -0.25
MRPL28-210ENST00000483764 COX19Q49B96 90 aa13.49□□□□□ -0.25
MRPL28-210ENST00000483764 MIR17HGQ75NE6 70 aa13.49□□□□□ -0.25
MRPL28-210ENST00000483764 SGMS2Q8NHU3 365 aa13.49□□□□□ -0.25
MRPL28-210ENST00000483764 TRGV9Q99603 122 aa13.49□□□□□ -0.25
MRPL28-210ENST00000483764 YTHDF2Q9Y5A9 579 aaKnown RBP13.49□□□□□ -0.25
MRPL28-210ENST00000483764 ZFHX3Q15911 3703 aa13.48□□□□□ -0.25
MRPL28-210ENST00000483764 INAFM1C9JVW0 142 aa13.48□□□□□ -0.25
MRPL28-210ENST00000483764 ATP6V0E1O15342 81 aa13.48□□□□□ -0.25
MRPL28-210ENST00000483764 IGHG2P01859 326 aa13.48□□□□□ -0.25
MRPL28-210ENST00000483764 OR10J4P0C629 311 aa13.48□□□□□ -0.25
MRPL28-210ENST00000483764 DEFA4P12838 97 aa13.48□□□□□ -0.25
MRPL28-210ENST00000483764 ASPHD1Q5U4P2 390 aa13.48□□□□□ -0.25
MRPL28-210ENST00000483764 OR10G8Q8NGN5 311 aa13.48□□□□□ -0.25
MRPL28-210ENST00000483764 DUX5Q96PT3 197 aa13.48□□□□□ -0.25
MRPL28-210ENST00000483764 IGKV1OR2-108A0A075B7D4 117 aa13.47□□□□□ -0.25
MRPL28-210ENST00000483764 SCO2A0A1W2PP80 73 aa13.47□□□□□ -0.25
MRPL28-210ENST00000483764 PSMB11A5LHX3 300 aa13.47□□□□□ -0.25
MRPL28-210ENST00000483764 COX7A2P2O60397 106 aa13.47□□□□□ -0.25
MRPL28-210ENST00000483764 FRZBQ92765 325 aa13.47□□□□□ -0.25
MRPL28-210ENST00000483764 F11RQ9Y624 299 aaKnown RBP13.47□□□□□ -0.25
MRPL28-210ENST00000483764 NPIPB5A8MRT5 1133 aa13.46□□□□□ -0.25
MRPL28-210ENST00000483764 OR7C2O60412 319 aa13.46□□□□□ -0.25
MRPL28-210ENST00000483764 FABP1P07148 127 aa13.46□□□□□ -0.25
MRPL28-210ENST00000483764 TAS2R60P59551 318 aa13.46□□□□□ -0.25
MRPL28-210ENST00000483764 ACTL10Q5JWF8 245 aa13.46□□□□□ -0.25
MRPL28-210ENST00000483764 C10orf113Q5VZT2 155 aa13.46□□□□□ -0.25
MRPL28-210ENST00000483764 UNQ5815/PRO19632Q6UWF5 114 aa13.46□□□□□ -0.25
MRPL28-210ENST00000483764 Q6ZS46 218 aa13.46□□□□□ -0.25
MRPL28-210ENST00000483764 TTC9CQ8N5M4 171 aa13.46□□□□□ -0.25
MRPL28-210ENST00000483764 TMEM116Q8NCL8 245 aa13.46□□□□□ -0.25
MRPL28-210ENST00000483764 OR4X1Q8NH49 305 aa13.46□□□□□ -0.25
MRPL28-210ENST00000483764 ZNF418Q8TF45 676 aaPredicted RBP13.46□□□□□ -0.25
MRPL28-210ENST00000483764 TMEM68Q96MH6 324 aa13.46□□□□□ -0.25
MRPL28-210ENST00000483764 WNT10AQ9GZT5 417 aa13.46□□□□□ -0.25
MRPL28-210ENST00000483764 A0A1W2PPQ1 181 aa13.45□□□□□ -0.26
MRPL28-210ENST00000483764 HELTA6NFD8 242 aa13.45□□□□□ -0.26
MRPL28-210ENST00000483764 DNAJC9-AS1A6NH13 148 aa13.45□□□□□ -0.26
MRPL28-210ENST00000483764 TIGITQ495A1 244 aa13.45□□□□□ -0.26
MRPL28-210ENST00000483764 SPATA31B1PQ5VZV4 182 aa13.45□□□□□ -0.26
MRPL28-210ENST00000483764 TEX38Q6PEX7 206 aa13.45□□□□□ -0.26
MRPL28-210ENST00000483764 C19orf35Q6ZS72 473 aa13.45□□□□□ -0.26
MRPL28-210ENST00000483764 TMEM183AQ8IXX5 376 aa13.45□□□□□ -0.26
MRPL28-210ENST00000483764 HIST3H2BBQ8N257 126 aa13.45□□□□□ -0.26
MRPL28-210ENST00000483764 NPFFR1Q9GZQ6 430 aa13.45□□□□□ -0.26
MRPL28-210ENST00000483764 OR51M1Q9H341 326 aa13.45□□□□□ -0.26
MRPL28-210ENST00000483764 TRBV9A0A0B4J1U6 114 aa13.44□□□□□ -0.26
MRPL28-210ENST00000483764 IGF1P05019 195 aa13.44□□□□□ -0.26
MRPL28-210ENST00000483764 GNG4P50150 75 aa13.44□□□□□ -0.26
MRPL28-210ENST00000483764 CRIP2P52943 208 aaPredicted RBP13.44□□□□□ -0.26
MRPL28-210ENST00000483764 MFAP2P55001 183 aa13.44□□□□□ -0.26
MRPL28-210ENST00000483764 PLP1P60201 277 aa13.44□□□□□ -0.26
MRPL28-210ENST00000483764 ECSCRQ19T08 205 aa13.44□□□□□ -0.26
MRPL28-210ENST00000483764 OR5T1Q8NG75 326 aa13.44□□□□□ -0.26
MRPL28-210ENST00000483764 PRSS22Q9GZN4 317 aa13.44□□□□□ -0.26
MRPL28-210ENST00000483764 IL36BQ9NZH7 164 aa13.44□□□□□ -0.26
MRPL28-210ENST00000483764 G3V318 75 aa13.44□□□□□ -0.26
MRPL28-210ENST00000483764 S100A7AQ86SG5 101 aa13.44□□□□□ -0.26
MRPL28-210ENST00000483764 OCC1Q8TAD7 63 aa13.44□□□□□ -0.26
MRPL28-210ENST00000483764 NPIPB3Q92617 1050 aa13.44□□□□□ -0.26
MRPL28-210ENST00000483764 SMIM12Q96EX1 92 aa13.44□□□□□ -0.26
MRPL28-210ENST00000483764 ESM1Q9NQ30 184 aa13.44□□□□□ -0.26
MRPL28-210ENST00000483764 OSTCQ9NRP0 149 aa13.44□□□□□ -0.26
MRPL28-210ENST00000483764 MTORP42345 2549 aa13.43□□□□□ -0.26
MRPL28-210ENST00000483764 TRAV41A0A0B4J266 112 aa13.43□□□□□ -0.26
MRPL28-210ENST00000483764 UBE2L3P68036 154 aaKnown RBP13.43□□□□□ -0.26
MRPL28-210ENST00000483764 NECAP1Q8NC96 275 aa13.43□□□□□ -0.26
MRPL28-210ENST00000483764 OR2T6Q8NHC8 308 aa13.43□□□□□ -0.26
MRPL28-210ENST00000483764 FAM110DQ8TAY7 271 aaPredicted RBP13.43□□□□□ -0.26
MRPL28-210ENST00000483764 TMEM37Q8WXS4 190 aa13.43□□□□□ -0.26
MRPL28-210ENST00000483764 MISP3Q96FF7 219 aa13.43□□□□□ -0.26
MRPL28-210ENST00000483764 FAM167A-AS1Q96KT0 104 aa13.43□□□□□ -0.26
MRPL28-210ENST00000483764 CHRDL1Q9BU40 450 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms