RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 RNF24Q9Y225 148 aa11.65□□□□□ -0.54
RPP40-206ENST00000483546 IGSF23A1L1A6 192 aa11.64□□□□□ -0.55
RPP40-206ENST00000483546 LINC00322Q6ZN03 302 aaPredicted RBP11.64□□□□□ -0.55
RPP40-206ENST00000483546 DEFB125Q8N687 156 aa11.64□□□□□ -0.55
RPP40-206ENST00000483546 TMEM217Q8N7C4 229 aa11.64□□□□□ -0.55
RPP40-206ENST00000483546 SEPSECSQ9HD40 501 aaKnown RBP11.64□□□□□ -0.55
RPP40-206ENST00000483546 ODF3L2Q3SX64 289 aa11.63□□□□□ -0.55
RPP40-206ENST00000483546 SIGLEC15Q6ZMC9 328 aa11.63□□□□□ -0.55
RPP40-206ENST00000483546 PPP1R14BQ96C90 147 aa11.63□□□□□ -0.55
RPP40-206ENST00000483546 GPR82Q96P67 336 aa11.63□□□□□ -0.55
RPP40-206ENST00000483546 OR5AC2Q9NZP5 309 aa11.63□□□□□ -0.55
RPP40-206ENST00000483546 WDR83OSQ9Y284 106 aa11.63□□□□□ -0.55
RPP40-206ENST00000483546 IGKV3-7A0A075B6H7 116 aa11.62□□□□□ -0.55
RPP40-206ENST00000483546 H0YIZ8 118 aa11.62□□□□□ -0.55
RPP40-206ENST00000483546 K7EQG2 157 aa11.62□□□□□ -0.55
RPP40-206ENST00000483546 AGPAT2O15120 278 aa11.62□□□□□ -0.55
RPP40-206ENST00000483546 MPDU1O75352 247 aa11.62□□□□□ -0.55
RPP40-206ENST00000483546 LINC00869P0C866 280 aa11.62□□□□□ -0.55
RPP40-206ENST00000483546 TFPI2P48307 235 aa11.62□□□□□ -0.55
RPP40-206ENST00000483546 RAP2BP61225 183 aa11.62□□□□□ -0.55
RPP40-206ENST00000483546 EWSR1Q01844 656 aaKnown RBP eCLIP11.62□□□□□ -0.55
RPP40-206ENST00000483546 SAMD13Q5VXD3 122 aa11.62□□□□□ -0.55
RPP40-206ENST00000483546 SBSPONQ8IVN8 264 aa11.62□□□□□ -0.55
RPP40-206ENST00000483546 GBGT1Q8N5D6 347 aa11.62□□□□□ -0.55
RPP40-206ENST00000483546 STXBP6Q8NFX7 210 aa11.62□□□□□ -0.55
RPP40-206ENST00000483546 CHAC2Q8WUX2 184 aa11.62□□□□□ -0.55
RPP40-206ENST00000483546 NRN1Q9NPD7 142 aa11.62□□□□□ -0.55
RPP40-206ENST00000483546 HYPMO75409 117 aa11.61□□□□□ -0.55
RPP40-206ENST00000483546 ORM2P19652 201 aa11.61□□□□□ -0.55
RPP40-206ENST00000483546 CXCL3P19876 107 aa11.61□□□□□ -0.55
RPP40-206ENST00000483546 GATA2P23769 480 aaPredicted RBP11.61□□□□□ -0.55
RPP40-206ENST00000483546 FCN2Q15485 313 aa11.61□□□□□ -0.55
RPP40-206ENST00000483546 TMEM182Q6ZP80 229 aaPredicted RBP11.61□□□□□ -0.55
RPP40-206ENST00000483546 OR11H7Q8NGC8 314 aa11.61□□□□□ -0.55
RPP40-206ENST00000483546 OR1B1Q8NGR6 318 aa11.61□□□□□ -0.55
RPP40-206ENST00000483546 DCANP1Q8TF63 244 aa11.61□□□□□ -0.55
RPP40-206ENST00000483546 RNF126Q9BV68 326 aa11.61□□□□□ -0.55
RPP40-206ENST00000483546 WFDC10AQ9H1F0 79 aa11.61□□□□□ -0.55
RPP40-206ENST00000483546 ZMAT4Q9H898 229 aa11.61□□□□□ -0.55
RPP40-206ENST00000483546 MAP6D1Q9H9H5 199 aa11.61□□□□□ -0.55
RPP40-206ENST00000483546 HIGD1AQ9Y241 93 aa11.61□□□□□ -0.55
RPP40-206ENST00000483546 DNAH9Q9NYC9 4486 aa11.6□□□□□ -0.55
RPP40-206ENST00000483546 LOC102724200A0A096LPH7 203 aaPredicted RBP11.6□□□□□ -0.55
RPP40-206ENST00000483546 ZNF98A6NK75 572 aa11.6□□□□□ -0.55
RPP40-206ENST00000483546 GIPP09681 153 aaPredicted RBP11.6□□□□□ -0.55
RPP40-206ENST00000483546 LYL1P12980 280 aa11.6□□□□□ -0.55
RPP40-206ENST00000483546 CAMLGP49069 296 aa11.6□□□□□ -0.55
RPP40-206ENST00000483546 FGL1Q08830 312 aa11.6□□□□□ -0.55
RPP40-206ENST00000483546 WFDC3Q8IUB2 231 aa11.6□□□□□ -0.55
RPP40-206ENST00000483546 OR8I2Q8N0Y5 310 aa11.6□□□□□ -0.55
RPP40-206ENST00000483546 STPG3Q8N7X2 389 aa11.6□□□□□ -0.55
RPP40-206ENST00000483546 OR5C1Q8NGR4 320 aa11.6□□□□□ -0.55
RPP40-206ENST00000483546 THAP6Q8TBB0 222 aa11.6□□□□□ -0.55
RPP40-206ENST00000483546 MGST2Q99735 147 aa11.6□□□□□ -0.55
RPP40-206ENST00000483546 ASCL2Q99929 193 aa11.6□□□□□ -0.55
RPP40-206ENST00000483546 TM2D3Q9BRN9 247 aa11.6□□□□□ -0.55
RPP40-206ENST00000483546 GGTLC1Q9BX51 225 aa11.6□□□□□ -0.55
RPP40-206ENST00000483546 UBQLN2Q9UHD9 624 aa11.6□□□□□ -0.55
RPP40-206ENST00000483546 ELOA3CA0A087WX78 387 aaPredicted RBP11.59□□□□□ -0.55
RPP40-206ENST00000483546 UBE2L5PA0A1B0GUS4 154 aa11.59□□□□□ -0.55
RPP40-206ENST00000483546 RBMY1BA6NDE4 496 aaKnown RBP11.59□□□□□ -0.55
RPP40-206ENST00000483546 RBMY1EA6NEQ0 496 aaKnown RBP11.59□□□□□ -0.55
RPP40-206ENST00000483546 H3BRN7 92 aa11.59□□□□□ -0.55
RPP40-206ENST00000483546 RBMY1DP0C7P1 496 aaKnown RBP11.59□□□□□ -0.55
RPP40-206ENST00000483546 GALR1P47211 349 aa11.59□□□□□ -0.55
RPP40-206ENST00000483546 MEOX2P50222 304 aa11.59□□□□□ -0.55
RPP40-206ENST00000483546 NHLH2Q02577 135 aa11.59□□□□□ -0.55
RPP40-206ENST00000483546 HAGHQ16775 308 aa11.59□□□□□ -0.55
RPP40-206ENST00000483546 Q6ZRG5 221 aa11.59□□□□□ -0.55
RPP40-206ENST00000483546 SPATA25Q9BR10 227 aa11.59□□□□□ -0.55
RPP40-206ENST00000483546 SHANK2-AS3Q9BTD1 123 aa11.59□□□□□ -0.55
RPP40-206ENST00000483546 SLC25A39Q9BZJ4 359 aaPredicted RBP11.59□□□□□ -0.55
RPP40-206ENST00000483546 MBD2Q9UBB5 411 aa11.59□□□□□ -0.55
RPP40-206ENST00000483546 U3KQK5 164 aa11.59□□□□□ -0.55
RPP40-206ENST00000483546 KIR2DL5BA0A0G2JN68 375 aa11.58□□□□□ -0.56
RPP40-206ENST00000483546 KIR2DL5BA0A0G2JPC4 375 aa11.58□□□□□ -0.56
RPP40-206ENST00000483546 OR5G3P0C626 314 aa11.58□□□□□ -0.56
RPP40-206ENST00000483546 RPL12P30050 165 aaKnown RBP11.58□□□□□ -0.56
RPP40-206ENST00000483546 RPL29P47914 159 aaKnown RBP11.58□□□□□ -0.56
RPP40-206ENST00000483546 APOC4P55056 127 aa11.58□□□□□ -0.56
RPP40-206ENST00000483546 SNRPD3P62318 126 aaKnown RBP11.58□□□□□ -0.56
RPP40-206ENST00000483546 KIR2DL5AQ8N109 375 aa11.58□□□□□ -0.56
RPP40-206ENST00000483546 KIR2DL5BQ8NHK3 375 aa11.58□□□□□ -0.56
RPP40-206ENST00000483546 CITED4Q96RK1 184 aa11.58□□□□□ -0.56
RPP40-206ENST00000483546 ARL6Q9H0F7 186 aa11.58□□□□□ -0.56
RPP40-206ENST00000483546 KCNIP2Q9NS61 270 aa11.58□□□□□ -0.56
RPP40-206ENST00000483546 HSPB11Q9Y547 144 aa11.58□□□□□ -0.56
RPP40-206ENST00000483546 COL7A1Q02388 2944 aa11.58□□□□□ -0.56
RPP40-206ENST00000483546 UBE2CO00762 179 aa11.57□□□□□ -0.56
RPP40-206ENST00000483546 RPL7P18124 248 aaKnown RBP11.57□□□□□ -0.56
RPP40-206ENST00000483546 FGF7P21781 194 aa11.57□□□□□ -0.56
RPP40-206ENST00000483546 DEFB131AP59861 70 aa11.57□□□□□ -0.56
RPP40-206ENST00000483546 PRR20EP86478 221 aa11.57□□□□□ -0.56
RPP40-206ENST00000483546 PRR20CP86479 221 aa11.57□□□□□ -0.56
RPP40-206ENST00000483546 PRR20DP86480 221 aa11.57□□□□□ -0.56
RPP40-206ENST00000483546 PRR20BP86481 221 aa11.57□□□□□ -0.56
RPP40-206ENST00000483546 PRR20AP86496 221 aa11.57□□□□□ -0.56
RPP40-206ENST00000483546 OPCMLQ14982 345 aa11.57□□□□□ -0.56
RPP40-206ENST00000483546 OR1L4Q8NGR5 311 aa11.57□□□□□ -0.56
RPP40-206ENST00000483546 PFDN5Q99471 154 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms