RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 DIDO1Q9BTC0 2240 aaKnown RBP6.14□□□□□ -1.43
SNX13-208ENST00000482558 IGHV2-26A0A0B4J1V2 119 aa6.13□□□□□ -1.43
SNX13-208ENST00000482558 MDFIC2A0A1B0GVS7 189 aa6.13□□□□□ -1.43
SNX13-208ENST00000482558 OOSP1A8MZH6 123 aa6.13□□□□□ -1.43
SNX13-208ENST00000482558 BUB1B-PAK6H3BSN5 160 aa6.13□□□□□ -1.43
SNX13-208ENST00000482558 GGCTO75223 188 aaKnown RBP6.13□□□□□ -1.43
SNX13-208ENST00000482558 OR2J3O76001 311 aa6.13□□□□□ -1.43
SNX13-208ENST00000482558 IGLV2-23P01705 113 aa6.13□□□□□ -1.43
SNX13-208ENST00000482558 FABP1P07148 127 aa6.13□□□□□ -1.43
SNX13-208ENST00000482558 PFN1P07737 140 aaKnown RBP6.13□□□□□ -1.43
SNX13-208ENST00000482558 LINC00869P0C866 280 aa6.13□□□□□ -1.43
SNX13-208ENST00000482558 C8orf88P0DMB2 117 aa6.13□□□□□ -1.43
SNX13-208ENST00000482558 S100A2P29034 98 aa6.13□□□□□ -1.43
SNX13-208ENST00000482558 RPL35P42766 123 aaKnown RBP6.13□□□□□ -1.43
SNX13-208ENST00000482558 SEC61BP60468 96 aaKnown RBP6.13□□□□□ -1.43
SNX13-208ENST00000482558 COX19Q49B96 90 aa6.13□□□□□ -1.43
SNX13-208ENST00000482558 FAM78BQ5VT40 261 aa6.13□□□□□ -1.43
SNX13-208ENST00000482558 C16orf82Q7Z2V1 217 aa6.13□□□□□ -1.43
SNX13-208ENST00000482558 LINC01551Q86U37 167 aa6.13□□□□□ -1.43
SNX13-208ENST00000482558 ZCCHC24Q8N2G6 241 aaKnown RBP6.13□□□□□ -1.43
SNX13-208ENST00000482558 KIR3DL3Q8N743 410 aa6.13□□□□□ -1.43
SNX13-208ENST00000482558 LY6G5BQ8NDX9 201 aa6.13□□□□□ -1.43
SNX13-208ENST00000482558 OR2T10Q8NGZ9 312 aa6.13□□□□□ -1.43
SNX13-208ENST00000482558 LINC01560Q8TB33 94 aa6.13□□□□□ -1.43
SNX13-208ENST00000482558 ACY3Q96HD9 319 aa6.13□□□□□ -1.43
SNX13-208ENST00000482558 C12orf57Q99622 126 aa6.13□□□□□ -1.43
SNX13-208ENST00000482558 AAMDCQ9H7C9 122 aa6.13□□□□□ -1.43
SNX13-208ENST00000482558 ZNF430Q9H8G1 570 aaPredicted RBP6.13□□□□□ -1.43
SNX13-208ENST00000482558 URGCP-MRPS24S4R325 110 aa6.13□□□□□ -1.43
SNX13-208ENST00000482558 POLEQ07864 2286 aa6.13□□□□□ -1.43
SNX13-208ENST00000482558 TGIF2-C20orf24A0A0A6YYL0 155 aa6.12□□□□□ -1.43
SNX13-208ENST00000482558 TCRBV4S1A1TA0A5B7 111 aa6.12□□□□□ -1.43
SNX13-208ENST00000482558 CCL24O00175 119 aa6.12□□□□□ -1.43
SNX13-208ENST00000482558 APOHP02749 345 aaPredicted RBP6.12□□□□□ -1.43
SNX13-208ENST00000482558 CXCL1P09341 107 aa6.12□□□□□ -1.43
SNX13-208ENST00000482558 OR10J1P30954 320 aa6.12□□□□□ -1.43
SNX13-208ENST00000482558 RPL27AP46776 148 aaKnown RBP6.12□□□□□ -1.43
SNX13-208ENST00000482558 GNB1P62873 340 aa6.12□□□□□ -1.43
SNX13-208ENST00000482558 PSG3Q16557 428 aa6.12□□□□□ -1.43
SNX13-208ENST00000482558 PRSS8Q16651 343 aa6.12□□□□□ -1.43
SNX13-208ENST00000482558 UTF1Q5T230 341 aa6.12□□□□□ -1.43
SNX13-208ENST00000482558 GBGT1Q8N5D6 347 aa6.12□□□□□ -1.43
SNX13-208ENST00000482558 C11orf42Q8N5U0 333 aa6.12□□□□□ -1.43
SNX13-208ENST00000482558 OR11H6Q8NGC7 330 aa6.12□□□□□ -1.43
SNX13-208ENST00000482558 OR1P1Q8NH06 330 aa6.12□□□□□ -1.43
SNX13-208ENST00000482558 RPEQ96AT9 228 aa6.12□□□□□ -1.43
SNX13-208ENST00000482558 TRGV9Q99603 122 aa6.12□□□□□ -1.43
SNX13-208ENST00000482558 SLC25A33Q9BSK2 321 aa6.12□□□□□ -1.43
SNX13-208ENST00000482558 PTPRQQ9UMZ3 2332 aa6.12□□□□□ -1.43
SNX13-208ENST00000482558 ICE1Q9Y2F5 2266 aa6.12□□□□□ -1.43
SNX13-208ENST00000482558 YLPM1P49750 1951 aaKnown RBP6.11□□□□□ -1.43
SNX13-208ENST00000482558 IGHV1-3A0A0C4DH29 117 aa6.11□□□□□ -1.43
SNX13-208ENST00000482558 ENSAO43768 121 aaKnown RBP6.11□□□□□ -1.43
SNX13-208ENST00000482558 COX7A2P2O60397 106 aa6.11□□□□□ -1.43
SNX13-208ENST00000482558 HIST1H2BKO60814 126 aa6.11□□□□□ -1.43
SNX13-208ENST00000482558 EIF3GO75821 320 aaKnown RBP eCLIP6.11□□□□□ -1.43
SNX13-208ENST00000482558 HIST1H2BJP06899 126 aa6.11□□□□□ -1.43
SNX13-208ENST00000482558 OR10J4P0C629 311 aa6.11□□□□□ -1.43
SNX13-208ENST00000482558 HIST1H2BOP23527 126 aa6.11□□□□□ -1.43
SNX13-208ENST00000482558 COL8A2P25067 703 aa6.11□□□□□ -1.43
SNX13-208ENST00000482558 HIST1H2BBP33778 126 aa6.11□□□□□ -1.43
SNX13-208ENST00000482558 GPR6P46095 362 aaPredicted RBP6.11□□□□□ -1.43
SNX13-208ENST00000482558 HIST1H2BDP58876 126 aa6.11□□□□□ -1.43
SNX13-208ENST00000482558 TAS2R60P59551 318 aa6.11□□□□□ -1.43
SNX13-208ENST00000482558 UBE2G2P60604 165 aa6.11□□□□□ -1.43
SNX13-208ENST00000482558 HIST1H2BCP62807 126 aa6.11□□□□□ -1.43
SNX13-208ENST00000482558 HIST2H2BEQ16778 126 aa6.11□□□□□ -1.43
SNX13-208ENST00000482558 GCSAMLQ5JQS6 135 aa6.11□□□□□ -1.43
SNX13-208ENST00000482558 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.11□□□□□ -1.43
SNX13-208ENST00000482558 SAPCD1Q5SSQ6 148 aa6.11□□□□□ -1.43
SNX13-208ENST00000482558 C10orf113Q5VZT2 155 aa6.11□□□□□ -1.43
SNX13-208ENST00000482558 ZNF343Q6P1L6 599 aa6.11□□□□□ -1.43
SNX13-208ENST00000482558 MOB3BQ86TA1 216 aa6.11□□□□□ -1.43
SNX13-208ENST00000482558 PPP1R27Q86WC6 154 aa6.11□□□□□ -1.43
SNX13-208ENST00000482558 HIST1H2BHQ93079 126 aa6.11□□□□□ -1.43
SNX13-208ENST00000482558 SMIM12Q96EX1 92 aa6.11□□□□□ -1.43
SNX13-208ENST00000482558 SFRP2Q96HF1 295 aa6.11□□□□□ -1.43
SNX13-208ENST00000482558 HIST1H2BNQ99877 126 aa6.11□□□□□ -1.43
SNX13-208ENST00000482558 HIST1H2BMQ99879 126 aa6.11□□□□□ -1.43
SNX13-208ENST00000482558 DPM3Q9P2X0 92 aa6.11□□□□□ -1.43
SNX13-208ENST00000482558 TET2Q6N021 2002 aaPredicted RBP6.1□□□□□ -1.43
SNX13-208ENST00000482558 TRBV9A0A0B4J1U6 114 aa6.1□□□□□ -1.43
SNX13-208ENST00000482558 LY6LH3BQJ8 138 aa6.1□□□□□ -1.43
SNX13-208ENST00000482558 OR7C2O60412 319 aa6.1□□□□□ -1.43
SNX13-208ENST00000482558 NDUFS7O75251 213 aa6.1□□□□□ -1.43
SNX13-208ENST00000482558 FCN3O75636 299 aa6.1□□□□□ -1.43
SNX13-208ENST00000482558 TRGC2P03986 189 aa6.1□□□□□ -1.43
SNX13-208ENST00000482558 PRTN3P24158 256 aa6.1□□□□□ -1.43
SNX13-208ENST00000482558 HTR1DP28221 377 aa6.1□□□□□ -1.43
SNX13-208ENST00000482558 S100A7P31151 101 aa6.1□□□□□ -1.43
SNX13-208ENST00000482558 ATP5G3P48201 142 aa6.1□□□□□ -1.43
SNX13-208ENST00000482558 REG1BP48304 166 aa6.1□□□□□ -1.43
SNX13-208ENST00000482558 NDUFA6P56556 154 aa6.1□□□□□ -1.43
SNX13-208ENST00000482558 WT1-ASQ06250 92 aa6.1□□□□□ -1.43
SNX13-208ENST00000482558 FOXI1Q12951 378 aa6.1□□□□□ -1.43
SNX13-208ENST00000482558 PSG5Q15238 335 aa6.1□□□□□ -1.43
SNX13-208ENST00000482558 MRPL23Q16540 153 aaKnown RBP6.1□□□□□ -1.43
SNX13-208ENST00000482558 TIGITQ495A1 244 aa6.1□□□□□ -1.43
SNX13-208ENST00000482558 COA6Q5JTJ3 125 aaKnown RBP6.1□□□□□ -1.43
SNX13-208ENST00000482558 MINOS1Q5TGZ0 78 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms