RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 DYDC1Q8WWB3 177 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 ASB17Q8WXJ9 295 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 CHCHD10Q8WYQ3 142 aaPredicted RBP1.16□□□□□ -2.22
USH2A-204ENST00000481786 PINX1Q96BK5 328 aaKnown RBP1.16□□□□□ -2.22
USH2A-204ENST00000481786 PELI1Q96FA3 418 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 CPNE2Q96FN4 548 aaPredicted RBP1.16□□□□□ -2.22
USH2A-204ENST00000481786 TPD52L3Q96J77 140 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 PGLYRP4Q96LB8 373 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 Q96MT0 163 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 RIBC2Q9H4K1 309 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 SPACA1Q9HBV2 294 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 LINC00846Q9NV44 126 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 C21orf62Q9NYP8 219 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 IL36GQ9NZH8 169 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 KCNIP1Q9NZI2 227 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 OR52A1Q9UKL2 312 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 BAIAP2Q9UQB8 552 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 TIMM8BQ9Y5J9 83 aaPredicted RBP1.16□□□□□ -2.22
USH2A-204ENST00000481786 R4GMQ9 66 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 V9GYY5 206 aaPredicted RBP1.16□□□□□ -2.22
USH2A-204ENST00000481786 MUC17Q685J3 4493 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 IGHV3OR16-13A0A075B7E8 117 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 IGHV3-74A0A0B4J1X5 117 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 ZNF98A6NK75 572 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 ZNF705GA8MUZ8 300 aaPredicted RBP1.15□□□□□ -2.23
USH2A-204ENST00000481786 TMEM14DPA8MWL7 114 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 MCRIP1C9JLW8 97 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 J3QRK9 145 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 ISLRO14498 428 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 LECT2O14960 151 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 UBDO15205 165 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 ATP8B1O43520 1251 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 SSX5O60225 188 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 PITX3O75364 302 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 SC5DO75845 299 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 NAPSAO96009 420 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 CTSGP08311 255 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 ZNF735P0CB33 412 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 HTR2CP28335 458 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 KDELR2P33947 212 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 ETV6P41212 452 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 GSSP48637 474 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 MRPL19P49406 292 aaKnown RBP1.15□□□□□ -2.23
USH2A-204ENST00000481786 NUDT2P50583 147 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 GZMMP51124 257 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 RBM11P57052 281 aaKnown RBP1.15□□□□□ -2.23
USH2A-204ENST00000481786 FXYD7P58549 80 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 PSG9Q00887 426 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 TSPAN31Q12999 210 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 DHRS2Q13268 280 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 MOBPQ13875 183 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 GAMTQ14353 236 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 RSU1Q15404 277 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 KISS1Q15726 138 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 MRPL23Q16540 153 aaKnown RBP1.15□□□□□ -2.23
USH2A-204ENST00000481786 LINC01556Q5JQF7 62 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 RBM48Q5RL73 367 aaKnown RBP1.15□□□□□ -2.23
USH2A-204ENST00000481786 C10orf55Q5SWW7 151 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 SPATA31B1PQ5VZV4 182 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 ERICH5Q6P6B1 374 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 IDO2Q6ZQW0 420 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 ZNF493Q6ZR52 646 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 C19orf35Q6ZS72 473 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 ARL6IP6Q8N6S5 226 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 C15orf54Q8N8G6 183 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.15□□□□□ -2.23
USH2A-204ENST00000481786 SPATA4Q8NEY3 305 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 OR4K15Q8NH41 348 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 OR52N1Q8NH53 320 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 OR10A6Q8NH74 314 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 VSTM2AQ8TAG5 236 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 TMEM167AQ8TBQ9 72 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 PTX4Q96A99 478 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 SLC25A46Q96AG3 418 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 ABHD14BQ96IU4 210 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 IGF2BP2-AS1Q96M15 143 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 OR52B2Q96RD2 323 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 SH3GL1Q99961 368 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 YIPF3Q9GZM5 350 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 C20orf27Q9GZN8 174 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 SLC25A22Q9H936 323 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 MED4Q9NPJ6 270 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 IL20Q9NYY1 176 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 CCDC167Q9P0B6 97 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 ABRACLQ9P1F3 81 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 FAM32AQ9Y421 112 aaKnown RBP1.15□□□□□ -2.23
USH2A-204ENST00000481786 SAR1BQ9Y6B6 198 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 TMEM14AQ9Y6G1 99 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 ICOSQ9Y6W8 199 aa1.15□□□□□ -2.23
USH2A-204ENST00000481786 TRAV8-3A0A0A6YYJ7 113 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 TRAV8-1A0A0A6YYK1 113 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 IGHV3-66A0A0C4DH42 116 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 A0A1W2PQL4 384 aaPredicted RBP1.14□□□□□ -2.23
USH2A-204ENST00000481786 E7EUB6 86 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 M0R1X1 148 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 GEMIN2O14893 280 aaKnown RBP1.14□□□□□ -2.23
USH2A-204ENST00000481786 MED6O75586 246 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 CCNKO75909 580 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 CCNB2O95067 398 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 CST1P01037 141 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms