RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 STXBP6Q8NFX7 210 aa11.32□□□□□ -0.6
ABCF3-213ENST00000480539 MS4A6AQ9H2W1 248 aa11.32□□□□□ -0.6
ABCF3-213ENST00000480539 HSPB11Q9Y547 144 aa11.32□□□□□ -0.6
ABCF3-213ENST00000480539 SORL1Q92673 2214 aa11.31□□□□□ -0.6
ABCF3-213ENST00000480539 BUB3O43684 328 aa11.31□□□□□ -0.6
ABCF3-213ENST00000480539 CFDP00746 253 aaPredicted RBP11.31□□□□□ -0.6
ABCF3-213ENST00000480539 LYL1P12980 280 aa11.31□□□□□ -0.6
ABCF3-213ENST00000480539 CAMLGP49069 296 aa11.31□□□□□ -0.6
ABCF3-213ENST00000480539 RAP2BP61225 183 aa11.31□□□□□ -0.6
ABCF3-213ENST00000480539 ATP6V1FQ16864 119 aa11.31□□□□□ -0.6
ABCF3-213ENST00000480539 ODF3L2Q3SX64 289 aa11.31□□□□□ -0.6
ABCF3-213ENST00000480539 Q5BKY6 102 aa11.31□□□□□ -0.6
ABCF3-213ENST00000480539 GGTLC1Q9BX51 225 aa11.31□□□□□ -0.6
ABCF3-213ENST00000480539 SMIM3Q9BZL3 60 aa11.31□□□□□ -0.6
ABCF3-213ENST00000480539 SLC45A2Q9UMX9 530 aa11.31□□□□□ -0.6
ABCF3-213ENST00000480539 OR11H12B2RN74 326 aa11.3□□□□□ -0.6
ABCF3-213ENST00000480539 DNASE2O00115 360 aaPredicted RBP11.3□□□□□ -0.6
ABCF3-213ENST00000480539 CD5P06127 495 aa11.3□□□□□ -0.6
ABCF3-213ENST00000480539 OR5G3P0C626 314 aa11.3□□□□□ -0.6
ABCF3-213ENST00000480539 FRMD6-AS1P0C7T7 363 aa11.3□□□□□ -0.6
ABCF3-213ENST00000480539 PAFAH1B2P68402 229 aa11.3□□□□□ -0.6
ABCF3-213ENST00000480539 RAB31Q13636 194 aa11.3□□□□□ -0.6
ABCF3-213ENST00000480539 MIC13Q5XKP0 118 aa11.3□□□□□ -0.6
ABCF3-213ENST00000480539 SIGLEC15Q6ZMC9 328 aa11.3□□□□□ -0.6
ABCF3-213ENST00000480539 ASB13Q8WXK3 278 aa11.3□□□□□ -0.6
ABCF3-213ENST00000480539 ATP5SQ99766 215 aa11.3□□□□□ -0.6
ABCF3-213ENST00000480539 SCRT1Q9BWW7 348 aa11.3□□□□□ -0.6
ABCF3-213ENST00000480539 ARL6Q9H0F7 186 aa11.3□□□□□ -0.6
ABCF3-213ENST00000480539 SRD5A3Q9H8P0 318 aa11.3□□□□□ -0.6
ABCF3-213ENST00000480539 SLC25A22Q9H936 323 aa11.3□□□□□ -0.6
ABCF3-213ENST00000480539 C19orf73Q9NVV2 129 aa11.3□□□□□ -0.6
ABCF3-213ENST00000480539 PFDN2Q9UHV9 154 aa11.3□□□□□ -0.6
ABCF3-213ENST00000480539 HIGD1AQ9Y241 93 aa11.3□□□□□ -0.6
ABCF3-213ENST00000480539 FXYD6-FXYD2A0A087WZ82 144 aa11.29□□□□□ -0.6
ABCF3-213ENST00000480539 HELTA6NFD8 242 aa11.29□□□□□ -0.6
ABCF3-213ENST00000480539 H3BRN7 92 aa11.29□□□□□ -0.6
ABCF3-213ENST00000480539 FGL1Q08830 312 aa11.29□□□□□ -0.6
ABCF3-213ENST00000480539 OPCMLQ14982 345 aa11.29□□□□□ -0.6
ABCF3-213ENST00000480539 LEMD1Q68G75 181 aa11.29□□□□□ -0.6
ABCF3-213ENST00000480539 FAM24BQ8N5W8 94 aa11.29□□□□□ -0.6
ABCF3-213ENST00000480539 OR2T35Q8NGX2 323 aa11.29□□□□□ -0.6
ABCF3-213ENST00000480539 CHAC2Q8WUX2 184 aa11.29□□□□□ -0.6
ABCF3-213ENST00000480539 UHRF2Q96PU4 802 aa11.29□□□□□ -0.6
ABCF3-213ENST00000480539 B9D2Q9BPU9 175 aa11.29□□□□□ -0.6
ABCF3-213ENST00000480539 TUBA4BQ9H853 241 aa11.29□□□□□ -0.6
ABCF3-213ENST00000480539 COX7A2P2O60397 106 aa11.28□□□□□ -0.6
ABCF3-213ENST00000480539 HYPMO75409 117 aa11.28□□□□□ -0.6
ABCF3-213ENST00000480539 PLP1P60201 277 aa11.28□□□□□ -0.6
ABCF3-213ENST00000480539 ASCL2Q99929 193 aa11.28□□□□□ -0.6
ABCF3-213ENST00000480539 NPCDR1Q9BY65 106 aa11.28□□□□□ -0.6
ABCF3-213ENST00000480539 SLC25A39Q9BZJ4 359 aaPredicted RBP11.28□□□□□ -0.6
ABCF3-213ENST00000480539 ARV1Q9H2C2 271 aa11.28□□□□□ -0.6
ABCF3-213ENST00000480539 SLC25A32Q9H2D1 315 aa11.28□□□□□ -0.6
ABCF3-213ENST00000480539 ZNF98A6NK75 572 aa11.27□□□□□ -0.61
ABCF3-213ENST00000480539 SMLR1H3BR10 107 aa11.27□□□□□ -0.61
ABCF3-213ENST00000480539 B2MP61769 119 aa11.27□□□□□ -0.61
ABCF3-213ENST00000480539 ZNF124Q15973 351 aa11.27□□□□□ -0.61
ABCF3-213ENST00000480539 PATE2Q6UY27 113 aa11.27□□□□□ -0.61
ABCF3-213ENST00000480539 OR8I2Q8N0Y5 310 aa11.27□□□□□ -0.61
ABCF3-213ENST00000480539 CITED4Q96RK1 184 aa11.27□□□□□ -0.61
ABCF3-213ENST00000480539 SHANK2-AS3Q9BTD1 123 aa11.27□□□□□ -0.61
ABCF3-213ENST00000480539 MAP6D1Q9H9H5 199 aa11.27□□□□□ -0.61
ABCF3-213ENST00000480539 NRN1Q9NPD7 142 aa11.27□□□□□ -0.61
ABCF3-213ENST00000480539 FBXL17Q9UF56 701 aa11.27□□□□□ -0.61
ABCF3-213ENST00000480539 PXMP4Q9Y6I8 212 aa11.27□□□□□ -0.61
ABCF3-213ENST00000480539 TRAV2A0A0B4J234 112 aa11.26□□□□□ -0.61
ABCF3-213ENST00000480539 G3V3Q6 166 aa11.26□□□□□ -0.61
ABCF3-213ENST00000480539 K7EQG2 157 aa11.26□□□□□ -0.61
ABCF3-213ENST00000480539 ZNF688P0C7X2 276 aa11.26□□□□□ -0.61
ABCF3-213ENST00000480539 RPL29P47914 159 aaKnown RBP11.26□□□□□ -0.61
ABCF3-213ENST00000480539 PRR20EP86478 221 aa11.26□□□□□ -0.61
ABCF3-213ENST00000480539 PRR20CP86479 221 aa11.26□□□□□ -0.61
ABCF3-213ENST00000480539 PRR20DP86480 221 aa11.26□□□□□ -0.61
ABCF3-213ENST00000480539 PRR20BP86481 221 aa11.26□□□□□ -0.61
ABCF3-213ENST00000480539 PRR20AP86496 221 aa11.26□□□□□ -0.61
ABCF3-213ENST00000480539 C1orf194Q5T5A4 169 aa11.26□□□□□ -0.61
ABCF3-213ENST00000480539 APRG1Q8IVJ8 170 aa11.26□□□□□ -0.61
ABCF3-213ENST00000480539 DCANP1Q8TF63 244 aa11.26□□□□□ -0.61
ABCF3-213ENST00000480539 WDR61Q9GZS3 305 aaKnown RBP11.26□□□□□ -0.61
ABCF3-213ENST00000480539 WFDC1Q9HC57 220 aa11.26□□□□□ -0.61
ABCF3-213ENST00000480539 SLC39A9Q9NUM3 307 aa11.26□□□□□ -0.61
ABCF3-213ENST00000480539 A8MZ25 164 aa11.25□□□□□ -0.61
ABCF3-213ENST00000480539 MPDU1O75352 247 aa11.25□□□□□ -0.61
ABCF3-213ENST00000480539 AP2S1P53680 142 aaPredicted RBP11.25□□□□□ -0.61
ABCF3-213ENST00000480539 PXDC1Q5TGL8 231 aa11.25□□□□□ -0.61
ABCF3-213ENST00000480539 C10orf113Q5VZT2 155 aa11.25□□□□□ -0.61
ABCF3-213ENST00000480539 SBSPONQ8IVN8 264 aa11.25□□□□□ -0.61
ABCF3-213ENST00000480539 AQP10Q96PS8 301 aa11.25□□□□□ -0.61
ABCF3-213ENST00000480539 DNAH9Q9NYC9 4486 aa11.24□□□□□ -0.61
ABCF3-213ENST00000480539 hCG_2014768A0A024R1R8 64 aa11.24□□□□□ -0.61
ABCF3-213ENST00000480539 RNF222A6NCQ9 220 aa11.24□□□□□ -0.61
ABCF3-213ENST00000480539 RBMY1BA6NDE4 496 aaKnown RBP11.24□□□□□ -0.61
ABCF3-213ENST00000480539 RBMY1EA6NEQ0 496 aaKnown RBP11.24□□□□□ -0.61
ABCF3-213ENST00000480539 IFNA5P01569 189 aa11.24□□□□□ -0.61
ABCF3-213ENST00000480539 RBMY1DP0C7P1 496 aaKnown RBP11.24□□□□□ -0.61
ABCF3-213ENST00000480539 S100A7P31151 101 aa11.24□□□□□ -0.61
ABCF3-213ENST00000480539 GALR1P47211 349 aa11.24□□□□□ -0.61
ABCF3-213ENST00000480539 DEFB131AP59861 70 aa11.24□□□□□ -0.61
ABCF3-213ENST00000480539 GCSAMLQ5JQS6 135 aa11.24□□□□□ -0.61
ABCF3-213ENST00000480539 MORN5Q5VZ52 161 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms