RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.41□□□□□ -1.38
USP54-212ENST00000480210 COL5A1-AS1Q5SY13 56 aa6.41□□□□□ -1.38
USP54-212ENST00000480210 C1orf194Q5T5A4 169 aa6.41□□□□□ -1.38
USP54-212ENST00000480210 ZNF343Q6P1L6 599 aa6.41□□□□□ -1.38
USP54-212ENST00000480210 C11orf44Q8N8P7 122 aa6.41□□□□□ -1.38
USP54-212ENST00000480210 KLHL30-AS1Q8NEE0 82 aa6.41□□□□□ -1.38
USP54-212ENST00000480210 DPF1Q92782 380 aa6.41□□□□□ -1.38
USP54-212ENST00000480210 HIST1H2BHQ93079 126 aa6.41□□□□□ -1.38
USP54-212ENST00000480210 HIST1H2BNQ99877 126 aa6.41□□□□□ -1.38
USP54-212ENST00000480210 HIST1H2BMQ99879 126 aa6.41□□□□□ -1.38
USP54-212ENST00000480210 GINS3Q9BRX5 216 aa6.41□□□□□ -1.38
USP54-212ENST00000480210 RBKSQ9H477 322 aa6.41□□□□□ -1.38
USP54-212ENST00000480210 PEF1Q9UBV8 284 aaKnown RBP6.41□□□□□ -1.38
USP54-212ENST00000480210 TRAV30A0A087WSZ9 112 aa6.4□□□□□ -1.38
USP54-212ENST00000480210 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.4□□□□□ -1.38
USP54-212ENST00000480210 ADARB2-AS1A8MUL3 147 aa6.4□□□□□ -1.38
USP54-212ENST00000480210 LINC01619G3V211 115 aa6.4□□□□□ -1.38
USP54-212ENST00000480210 OR2J3O76001 311 aa6.4□□□□□ -1.38
USP54-212ENST00000480210 YIF1AO95070 293 aa6.4□□□□□ -1.38
USP54-212ENST00000480210 PF4P02776 101 aa6.4□□□□□ -1.38
USP54-212ENST00000480210 REG1AP05451 166 aa6.4□□□□□ -1.38
USP54-212ENST00000480210 APELAP0DMC3 54 aa6.4□□□□□ -1.38
USP54-212ENST00000480210 RNASE2P10153 161 aaKnown RBP6.4□□□□□ -1.38
USP54-212ENST00000480210 NPY1RP25929 384 aa6.4□□□□□ -1.38
USP54-212ENST00000480210 CDKN1BP46527 198 aa6.4□□□□□ -1.38
USP54-212ENST00000480210 MFAP4P55083 255 aa6.4□□□□□ -1.38
USP54-212ENST00000480210 C15orf32Q32M92 178 aa6.4□□□□□ -1.38
USP54-212ENST00000480210 LRRC37A5PQ49AS3 106 aa6.4□□□□□ -1.38
USP54-212ENST00000480210 KHDC3LQ587J8 217 aa6.4□□□□□ -1.38
USP54-212ENST00000480210 PRR31Q5SQ13 230 aa6.4□□□□□ -1.38
USP54-212ENST00000480210 SPSB3Q6PJ21 355 aa6.4□□□□□ -1.38
USP54-212ENST00000480210 LCNL1Q6ZST4 164 aa6.4□□□□□ -1.38
USP54-212ENST00000480210 CACNG8Q8WXS5 425 aa6.4□□□□□ -1.38
USP54-212ENST00000480210 GNPNAT1Q96EK6 184 aaPredicted RBP6.4□□□□□ -1.38
USP54-212ENST00000480210 OR10C1Q96KK4 312 aa6.4□□□□□ -1.38
USP54-212ENST00000480210 RNF126Q9BV68 326 aa6.4□□□□□ -1.38
USP54-212ENST00000480210 SRD5A3Q9H8P0 318 aa6.4□□□□□ -1.38
USP54-212ENST00000480210 GSKIPQ9P0R6 139 aa6.4□□□□□ -1.38
USP54-212ENST00000480210 CCL24O00175 119 aa6.39□□□□□ -1.39
USP54-212ENST00000480210 PHOX2AO14813 284 aa6.39□□□□□ -1.39
USP54-212ENST00000480210 NDUFB8O95169 186 aa6.39□□□□□ -1.39
USP54-212ENST00000480210 FABP4P15090 132 aa6.39□□□□□ -1.39
USP54-212ENST00000480210 RPL12P30050 165 aaKnown RBP6.39□□□□□ -1.39
USP54-212ENST00000480210 CEBPGP53567 150 aa6.39□□□□□ -1.39
USP54-212ENST00000480210 FAM3BP58499 235 aaPredicted RBP6.39□□□□□ -1.39
USP54-212ENST00000480210 VAMP2P63027 116 aa6.39□□□□□ -1.39
USP54-212ENST00000480210 RPL19P84098 196 aaKnown RBP6.39□□□□□ -1.39
USP54-212ENST00000480210 ZNF616Q08AN1 781 aa6.39□□□□□ -1.39
USP54-212ENST00000480210 IL15RAQ13261 267 aa6.39□□□□□ -1.39
USP54-212ENST00000480210 ELOBQ15370 118 aa6.39□□□□□ -1.39
USP54-212ENST00000480210 WFDC9Q8NEX5 89 aa6.39□□□□□ -1.39
USP54-212ENST00000480210 OR11H1Q8NG94 326 aa6.39□□□□□ -1.39
USP54-212ENST00000480210 OR1N2Q8NGR9 330 aa6.39□□□□□ -1.39
USP54-212ENST00000480210 FAM210BQ96KR6 192 aa6.39□□□□□ -1.39
USP54-212ENST00000480210 HIST1H2BLQ99880 126 aa6.39□□□□□ -1.39
USP54-212ENST00000480210 MCRIP2Q9BUT9 160 aaKnown RBP6.39□□□□□ -1.39
USP54-212ENST00000480210 SLC25A31Q9H0C2 315 aa6.39□□□□□ -1.39
USP54-212ENST00000480210 TMEM231Q9H6L2 316 aa6.39□□□□□ -1.39
USP54-212ENST00000480210 GNB4Q9HAV0 340 aa6.39□□□□□ -1.39
USP54-212ENST00000480210 C21orf62Q9NYP8 219 aa6.39□□□□□ -1.39
USP54-212ENST00000480210 PSENENQ9NZ42 101 aa6.39□□□□□ -1.39
USP54-212ENST00000480210 ZFP30Q9Y2G7 519 aa6.39□□□□□ -1.39
USP54-212ENST00000480210 STAB1Q9NY15 2570 aa6.39□□□□□ -1.39
USP54-212ENST00000480210 A0A1W2PRX2 142 aa6.38□□□□□ -1.39
USP54-212ENST00000480210 RBFOX3A6NFN3 312 aa6.38□□□□□ -1.39
USP54-212ENST00000480210 I3L2K1 104 aa6.38□□□□□ -1.39
USP54-212ENST00000480210 K7EP13 123 aa6.38□□□□□ -1.39
USP54-212ENST00000480210 MT-CO2P00403 227 aa6.38□□□□□ -1.39
USP54-212ENST00000480210 IFNA1P01562 189 aa6.38□□□□□ -1.39
USP54-212ENST00000480210 PRH1P02810 166 aa6.38□□□□□ -1.39
USP54-212ENST00000480210 GZMBP10144 247 aa6.38□□□□□ -1.39
USP54-212ENST00000480210 PAFAH1B2P68402 229 aa6.38□□□□□ -1.39
USP54-212ENST00000480210 SRSF3P84103 164 aaKnown RBP6.38□□□□□ -1.39
USP54-212ENST00000480210 FHL3Q13643 280 aa6.38□□□□□ -1.39
USP54-212ENST00000480210 PMS2P11Q13670 270 aa6.38□□□□□ -1.39
USP54-212ENST00000480210 SPINK9Q5DT21 86 aa6.38□□□□□ -1.39
USP54-212ENST00000480210 C8orf86Q6ZUL3 223 aa6.38□□□□□ -1.39
USP54-212ENST00000480210 SSX7Q7RTT5 188 aa6.38□□□□□ -1.39
USP54-212ENST00000480210 GPHB5Q86YW7 130 aa6.38□□□□□ -1.39
USP54-212ENST00000480210 ZNF502Q8TBZ5 544 aa6.38□□□□□ -1.39
USP54-212ENST00000480210 C20orf144Q9BQM9 153 aa6.38□□□□□ -1.39
USP54-212ENST00000480210 TMEM208Q9BTX3 173 aa6.38□□□□□ -1.39
USP54-212ENST00000480210 TRAV1-1A0A0B4J248 108 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 KIR2DL5BA0A0G2JN68 375 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 KIR2DL5BA0A0G2JPC4 375 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 C20orf202A1L168 122 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 FNDC10F2Z333 226 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 H3BQ15 152 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 K7EIM0 57 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 CCSO14618 274 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 DEDDO75618 318 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 SCGB1D2O95969 90 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 IGHV3-11P01762 117 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 CLEC3BP05452 202 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 TRGC1P0CF51 173 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 OPRK1P41145 380 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 INSL3P51460 131 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 MFAP2P55001 183 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 CD69Q07108 199 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 TMEM183BQ1AE95 376 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms