RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 RPRMQ9NS64 109 aa5.15□□□□□ -1.59
COL17A1-205ENST00000480127 HSPB7Q9UBY9 170 aa5.15□□□□□ -1.59
COL17A1-205ENST00000480127 APLNQ9ULZ1 77 aa5.15□□□□□ -1.59
COL17A1-205ENST00000480127 AGRNO00468 2067 aa5.14□□□□□ -1.59
COL17A1-205ENST00000480127 DUXBA0A1W2PPF3 345 aa5.14□□□□□ -1.59
COL17A1-205ENST00000480127 CENPXA8MT69 81 aa5.14□□□□□ -1.59
COL17A1-205ENST00000480127 H3BMQ9 156 aa5.14□□□□□ -1.59
COL17A1-205ENST00000480127 H3BP45 60 aa5.14□□□□□ -1.59
COL17A1-205ENST00000480127 CFDP00746 253 aaPredicted RBP5.14□□□□□ -1.59
COL17A1-205ENST00000480127 HBE1P02100 147 aa5.14□□□□□ -1.59
COL17A1-205ENST00000480127 P0DMU3 169 aa5.14□□□□□ -1.59
COL17A1-205ENST00000480127 FAM231AP0DMU4 169 aa5.14□□□□□ -1.59
COL17A1-205ENST00000480127 FAM231CP0DMU5 169 aa5.14□□□□□ -1.59
COL17A1-205ENST00000480127 HLA-DRB4P13762 266 aa5.14□□□□□ -1.59
COL17A1-205ENST00000480127 TNFSF8P32971 234 aa5.14□□□□□ -1.59
COL17A1-205ENST00000480127 GPX4P36969 197 aaPredicted RBP5.14□□□□□ -1.59
COL17A1-205ENST00000480127 NKX2-1P43699 371 aaPredicted RBP5.14□□□□□ -1.59
COL17A1-205ENST00000480127 PSMB3P49720 205 aa5.14□□□□□ -1.59
COL17A1-205ENST00000480127 MEOX2P50222 304 aa5.14□□□□□ -1.59
COL17A1-205ENST00000480127 RAP2BP61225 183 aa5.14□□□□□ -1.59
COL17A1-205ENST00000480127 SUPT4H1P63272 117 aaKnown RBP5.14□□□□□ -1.59
COL17A1-205ENST00000480127 ZNF90Q03938 601 aa5.14□□□□□ -1.59
COL17A1-205ENST00000480127 GAMTQ14353 236 aa5.14□□□□□ -1.59
COL17A1-205ENST00000480127 BSXQ3C1V8 233 aa5.14□□□□□ -1.59
COL17A1-205ENST00000480127 C4orf46Q504U0 113 aa5.14□□□□□ -1.59
COL17A1-205ENST00000480127 LINC00336Q6ZUF6 198 aa5.14□□□□□ -1.59
COL17A1-205ENST00000480127 Q8NAQ8 132 aa5.14□□□□□ -1.59
COL17A1-205ENST00000480127 DYNC2LI1Q8TCX1 351 aa5.14□□□□□ -1.59
COL17A1-205ENST00000480127 SLC25A21Q9BQT8 299 aaPredicted RBP5.14□□□□□ -1.59
COL17A1-205ENST00000480127 DOK5Q9P104 306 aa5.14□□□□□ -1.59
COL17A1-205ENST00000480127 STRAPQ9Y3F4 350 aaKnown RBP5.14□□□□□ -1.59
COL17A1-205ENST00000480127 RFNGQ9Y644 331 aa5.14□□□□□ -1.59
COL17A1-205ENST00000480127 HLA-DRB4X5D2U9 266 aa5.14□□□□□ -1.59
COL17A1-205ENST00000480127 H3BMM0 161 aa5.13□□□□□ -1.59
COL17A1-205ENST00000480127 BUB3O43684 328 aa5.13□□□□□ -1.59
COL17A1-205ENST00000480127 SYNGR2O43760 224 aa5.13□□□□□ -1.59
COL17A1-205ENST00000480127 SSSCA1O60232 199 aa5.13□□□□□ -1.59
COL17A1-205ENST00000480127 IL5P05113 134 aa5.13□□□□□ -1.59
COL17A1-205ENST00000480127 OR5G3P0C626 314 aa5.13□□□□□ -1.59
COL17A1-205ENST00000480127 RBMY1A1P0DJD3 496 aaKnown RBP5.13□□□□□ -1.59
COL17A1-205ENST00000480127 RBMY1CP0DJD4 496 aa5.13□□□□□ -1.59
COL17A1-205ENST00000480127 ANXA7P20073 488 aaKnown RBP5.13□□□□□ -1.59
COL17A1-205ENST00000480127 ALDH3B2P48448 385 aa5.13□□□□□ -1.59
COL17A1-205ENST00000480127 DAD1P61803 113 aa5.13□□□□□ -1.59
COL17A1-205ENST00000480127 RHOBP62745 196 aa5.13□□□□□ -1.59
COL17A1-205ENST00000480127 PSG9Q00887 426 aa5.13□□□□□ -1.59
COL17A1-205ENST00000480127 ZNF846Q147U1 533 aa5.13□□□□□ -1.59
COL17A1-205ENST00000480127 RBMY1FQ15415 496 aaKnown RBP5.13□□□□□ -1.59
COL17A1-205ENST00000480127 RRN3P1Q2M238 152 aa5.13□□□□□ -1.59
COL17A1-205ENST00000480127 AARDQ4LEZ3 155 aa5.13□□□□□ -1.59
COL17A1-205ENST00000480127 C1orf194Q5T5A4 169 aa5.13□□□□□ -1.59
COL17A1-205ENST00000480127 SPATA31B1PQ5VZV4 182 aa5.13□□□□□ -1.59
COL17A1-205ENST00000480127 FOXI2Q6ZQN5 318 aa5.13□□□□□ -1.59
COL17A1-205ENST00000480127 ZNF738Q8NE65 137 aa5.13□□□□□ -1.59
COL17A1-205ENST00000480127 TRGV9Q99603 122 aa5.13□□□□□ -1.59
COL17A1-205ENST00000480127 ATG101Q9BSB4 218 aa5.13□□□□□ -1.59
COL17A1-205ENST00000480127 RSG1Q9BU20 258 aa5.13□□□□□ -1.59
COL17A1-205ENST00000480127 RNF126Q9BV68 326 aa5.13□□□□□ -1.59
COL17A1-205ENST00000480127 MGAT4CQ9UBM8 478 aa5.13□□□□□ -1.59
COL17A1-205ENST00000480127 TMED3Q9Y3Q3 217 aa5.13□□□□□ -1.59
COL17A1-205ENST00000480127 ELOA3CA0A087WX78 387 aaPredicted RBP5.12□□□□□ -1.59
COL17A1-205ENST00000480127 LOC102723971A0A1B0GUV8 181 aa5.12□□□□□ -1.59
COL17A1-205ENST00000480127 SMIM9A6NGZ8 99 aa5.12□□□□□ -1.59
COL17A1-205ENST00000480127 ZNF705EA8MWA4 302 aaPredicted RBP5.12□□□□□ -1.59
COL17A1-205ENST00000480127 FAM25EA8MYX2 175 aa5.12□□□□□ -1.59
COL17A1-205ENST00000480127 L7N2F9 121 aa5.12□□□□□ -1.59
COL17A1-205ENST00000480127 M0R2N4 97 aa5.12□□□□□ -1.59
COL17A1-205ENST00000480127 ISLRO14498 428 aa5.12□□□□□ -1.59
COL17A1-205ENST00000480127 DUSP14O95147 198 aaKnown RBP5.12□□□□□ -1.59
COL17A1-205ENST00000480127 INSP01308 110 aa5.12□□□□□ -1.59
COL17A1-205ENST00000480127 HTN1P15515 57 aa5.12□□□□□ -1.59
COL17A1-205ENST00000480127 RRAS2P62070 204 aaPredicted RBP5.12□□□□□ -1.59
COL17A1-205ENST00000480127 VAMP2P63027 116 aa5.12□□□□□ -1.59
COL17A1-205ENST00000480127 PPP1R1AQ13522 171 aa5.12□□□□□ -1.59
COL17A1-205ENST00000480127 SOHLH1Q5JUK2 328 aa5.12□□□□□ -1.59
COL17A1-205ENST00000480127 FAM78BQ5VT40 261 aa5.12□□□□□ -1.59
COL17A1-205ENST00000480127 GSG1LQ6UXU4 331 aa5.12□□□□□ -1.59
COL17A1-205ENST00000480127 GPR82Q96P67 336 aa5.12□□□□□ -1.59
COL17A1-205ENST00000480127 SAV1Q9H4B6 383 aaPredicted RBP5.12□□□□□ -1.59
COL17A1-205ENST00000480127 SEPSECSQ9HD40 501 aaKnown RBP5.12□□□□□ -1.59
COL17A1-205ENST00000480127 PSENENQ9NZ42 101 aa5.12□□□□□ -1.59
COL17A1-205ENST00000480127 GSKIPQ9P0R6 139 aa5.12□□□□□ -1.59
COL17A1-205ENST00000480127 RNF24Q9Y225 148 aa5.12□□□□□ -1.59
COL17A1-205ENST00000480127 HIGD1AQ9Y241 93 aa5.12□□□□□ -1.59
COL17A1-205ENST00000480127 GOSR2O14653 212 aa5.11□□□□□ -1.59
COL17A1-205ENST00000480127 RTL8CO15255 209 aa5.11□□□□□ -1.59
COL17A1-205ENST00000480127 HYPMO75409 117 aa5.11□□□□□ -1.59
COL17A1-205ENST00000480127 SFT2D2O95562 160 aa5.11□□□□□ -1.59
COL17A1-205ENST00000480127 BCAP31P51572 246 aa5.11□□□□□ -1.59
COL17A1-205ENST00000480127 HIST1H1AQ02539 215 aaPredicted RBP5.11□□□□□ -1.59
COL17A1-205ENST00000480127 FAM222AQ5U5X8 452 aa5.11□□□□□ -1.59
COL17A1-205ENST00000480127 ACOT7LQ6ZUV0 252 aa5.11□□□□□ -1.59
COL17A1-205ENST00000480127 NIPSNAP3BQ9BS92 247 aa5.11□□□□□ -1.59
COL17A1-205ENST00000480127 WDR12Q9GZL7 423 aaKnown RBP5.11□□□□□ -1.59
COL17A1-205ENST00000480127 SLIRPQ9GZT3 109 aaKnown RBP5.11□□□□□ -1.59
COL17A1-205ENST00000480127 CELA1Q9UNI1 258 aa5.11□□□□□ -1.59
COL17A1-205ENST00000480127 U3KQE9 123 aa5.11□□□□□ -1.59
COL17A1-205ENST00000480127 X6R8D5 127 aa5.11□□□□□ -1.59
COL17A1-205ENST00000480127 FAT2Q9NYQ8 4349 aa5.11□□□□□ -1.59
COL17A1-205ENST00000480127 NAP1L6A6NFF2 107 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms