RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 IL3RAP26951 378 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 HTR2CP28335 458 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 QRFPP83859 136 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 ZNF816Q0VGE8 651 aaPredicted RBP3.37□□□□□ -1.87
UPF3A-205ENST00000479712 ERCC8Q13216 396 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 DYNC1I2Q13409 638 aaKnown RBP3.37□□□□□ -1.87
UPF3A-205ENST00000479712 MADCAM1Q13477 382 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 EBI3Q14213 229 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 PLET1Q6UQ28 207 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 TMEM91Q6ZNR0 172 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 CBLN2Q8IUK8 224 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 DYNAPQ8N1N2 210 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 Q8N976 141 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 TMEM104Q8NE00 496 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 OR10K1Q8NGX5 313 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 NDNFQ8TB73 568 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 C17orf50Q8WW18 174 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 PTX4Q96A99 478 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 GALNT14Q96FL9 552 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 CYYR1Q96J86 154 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 IFI27L2Q9H2X8 130 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 ZNF286AQ9HBT8 521 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 ZC4H2Q9NQZ6 224 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 NDUFB11Q9NX14 153 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 JPT1Q9UK76 154 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 KLK5Q9Y337 293 aaPredicted RBP3.37□□□□□ -1.87
UPF3A-205ENST00000479712 TSSC4Q9Y5U2 329 aaPredicted RBP3.37□□□□□ -1.87
UPF3A-205ENST00000479712 LRP1Q07954 4544 aaKnown RBP3.37□□□□□ -1.87
UPF3A-205ENST00000479712 SORL1Q92673 2214 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.36□□□□□ -1.87
UPF3A-205ENST00000479712 A0A096LNJ9 63 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 PNMA8CA0A1B0GUJ8 204 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 KRTAP9-6A8MVA2 160 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 SIVA1O15304 175 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 YPEL1O60688 119 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 CRTAPO75718 401 aaPredicted RBP3.36□□□□□ -1.87
UPF3A-205ENST00000479712 NAPSAO96009 420 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 SMR3BP02814 79 aaPredicted RBP3.36□□□□□ -1.87
UPF3A-205ENST00000479712 SSTR5P35346 364 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 BCAP31P51572 246 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 FABP5Q01469 135 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 PRB3Q04118 309 aaPredicted RBP3.36□□□□□ -1.87
UPF3A-205ENST00000479712 HMGN3Q15651 99 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 SSX1Q16384 188 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 FAM27D1Q5T7N8 215 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 ZNF880Q6PDB4 577 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 ZNF773Q6PK81 442 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 C10orf99Q6UWK7 81 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 INO80EQ8NBZ0 244 aaPredicted RBP3.36□□□□□ -1.87
UPF3A-205ENST00000479712 ZNF439Q8NDP4 499 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 NEK7Q8TDX7 302 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 ARL11Q969Q4 196 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 RPEQ96AT9 228 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 CNBD2Q96M20 576 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 YPEL2Q96QA6 119 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 CHAC1Q9BUX1 264 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 TMED9Q9BVK6 235 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 CCDC90BQ9GZT6 254 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 LPAR5Q9H1C0 372 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 TRAPPC2LQ9UL33 140 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 PSG11Q9UQ72 335 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 CHTOPQ9Y3Y2 248 aaKnown RBP3.36□□□□□ -1.87
UPF3A-205ENST00000479712 HILPDAQ9Y5L2 63 aa3.36□□□□□ -1.87
UPF3A-205ENST00000479712 IFITM5A6NNB3 132 aa3.35□□□□□ -1.87
UPF3A-205ENST00000479712 SEC14L6B5MCN3 397 aa3.35□□□□□ -1.87
UPF3A-205ENST00000479712 SDCBPO00560 298 aaPredicted RBP3.35□□□□□ -1.87
UPF3A-205ENST00000479712 HBZP02008 142 aa3.35□□□□□ -1.87
UPF3A-205ENST00000479712 RAB4AP20338 218 aa3.35□□□□□ -1.87
UPF3A-205ENST00000479712 MYL9P24844 172 aa3.35□□□□□ -1.87
UPF3A-205ENST00000479712 NFYBP25208 207 aa3.35□□□□□ -1.87
UPF3A-205ENST00000479712 SLC6A1P30531 599 aa3.35□□□□□ -1.87
UPF3A-205ENST00000479712 MAP2K4P45985 399 aa3.35□□□□□ -1.87
UPF3A-205ENST00000479712 SERPINB10P48595 397 aa3.35□□□□□ -1.87
UPF3A-205ENST00000479712 RPS25P62851 125 aaKnown RBP3.35□□□□□ -1.87
UPF3A-205ENST00000479712 INSL4Q14641 139 aa3.35□□□□□ -1.87
UPF3A-205ENST00000479712 MORN2Q502X0 79 aa3.35□□□□□ -1.87
UPF3A-205ENST00000479712 SYT6Q5T7P8 510 aaPredicted RBP3.35□□□□□ -1.87
UPF3A-205ENST00000479712 Q6ZS49 121 aa3.35□□□□□ -1.87
UPF3A-205ENST00000479712 LYPD1Q8N2G4 141 aa3.35□□□□□ -1.87
UPF3A-205ENST00000479712 Q8N6K4 173 aa3.35□□□□□ -1.87
UPF3A-205ENST00000479712 OR10X1Q8NGY0 326 aa3.35□□□□□ -1.87
UPF3A-205ENST00000479712 MRPL30Q8TCC3 161 aaKnown RBP3.35□□□□□ -1.87
UPF3A-205ENST00000479712 SRSF12Q8WXF0 261 aaKnown RBP3.35□□□□□ -1.87
UPF3A-205ENST00000479712 TMEM203Q969S6 136 aa3.35□□□□□ -1.87
UPF3A-205ENST00000479712 MRGPRFQ96AM1 343 aa3.35□□□□□ -1.87
UPF3A-205ENST00000479712 GALMQ96C23 342 aa3.35□□□□□ -1.87
UPF3A-205ENST00000479712 SULT4A1Q9BR01 284 aa3.35□□□□□ -1.87
UPF3A-205ENST00000479712 TOLLIPQ9H0E2 274 aa3.35□□□□□ -1.87
UPF3A-205ENST00000479712 BANF2Q9H503 90 aa3.35□□□□□ -1.87
UPF3A-205ENST00000479712 TAF9BQ9HBM6 251 aa3.35□□□□□ -1.87
UPF3A-205ENST00000479712 C12orf4Q9NQ89 552 aa3.35□□□□□ -1.87
UPF3A-205ENST00000479712 PLEKHJ1Q9NW61 149 aa3.35□□□□□ -1.87
UPF3A-205ENST00000479712 ABRACLQ9P1F3 81 aa3.35□□□□□ -1.87
UPF3A-205ENST00000479712 RAB22AQ9UL26 194 aa3.35□□□□□ -1.87
UPF3A-205ENST00000479712 FAT3Q8TDW7 4589 aa3.34□□□□□ -1.87
UPF3A-205ENST00000479712 A0A0A6YYH2 397 aa3.34□□□□□ -1.87
UPF3A-205ENST00000479712 IGHV1-3A0A0C4DH29 117 aa3.34□□□□□ -1.87
UPF3A-205ENST00000479712 A6NDN8 102 aa3.34□□□□□ -1.87
UPF3A-205ENST00000479712 A6NJ64 397 aa3.34□□□□□ -1.87
UPF3A-205ENST00000479712 SERPINE3A8MV23 424 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms