RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 RRHO14718 337 aa4.89□□□□□ -1.63
SF3B1-209ENST00000479532 CYB5BO43169 146 aa4.89□□□□□ -1.63
SF3B1-209ENST00000479532 PROP1O75360 226 aa4.89□□□□□ -1.63
SF3B1-209ENST00000479532 NDUFA7O95182 113 aa4.89□□□□□ -1.63
SF3B1-209ENST00000479532 IGLV2-14P01704 120 aa4.89□□□□□ -1.63
SF3B1-209ENST00000479532 IGKV1-16P04430 117 aa4.89□□□□□ -1.63
SF3B1-209ENST00000479532 SERPINE2P07093 398 aa4.89□□□□□ -1.63
SF3B1-209ENST00000479532 STAG3L3P0CL85 134 aa4.89□□□□□ -1.63
SF3B1-209ENST00000479532 F2RP25116 425 aa4.89□□□□□ -1.63
SF3B1-209ENST00000479532 VDAC2P45880 294 aaPredicted RBP4.89□□□□□ -1.63
SF3B1-209ENST00000479532 UBE2KP61086 200 aa4.89□□□□□ -1.63
SF3B1-209ENST00000479532 CFHR3Q02985 330 aa4.89□□□□□ -1.63
SF3B1-209ENST00000479532 TMEM128Q5BJH2 165 aa4.89□□□□□ -1.63
SF3B1-209ENST00000479532 WDR73Q6P4I2 378 aa4.89□□□□□ -1.63
SF3B1-209ENST00000479532 TEX38Q6PEX7 206 aa4.89□□□□□ -1.63
SF3B1-209ENST00000479532 PRIMA1Q86XR5 153 aa4.89□□□□□ -1.63
SF3B1-209ENST00000479532 Q8N6K4 173 aa4.89□□□□□ -1.63
SF3B1-209ENST00000479532 KLHDC1Q8N7A1 406 aa4.89□□□□□ -1.63
SF3B1-209ENST00000479532 C5orf56Q8N8D9 126 aa4.89□□□□□ -1.63
SF3B1-209ENST00000479532 NPBQ8NG41 125 aa4.89□□□□□ -1.63
SF3B1-209ENST00000479532 DDB2Q92466 427 aa4.89□□□□□ -1.63
SF3B1-209ENST00000479532 C5orf30Q96GV9 206 aa4.89□□□□□ -1.63
SF3B1-209ENST00000479532 EIF5A2Q9GZV4 153 aaKnown RBP4.89□□□□□ -1.63
SF3B1-209ENST00000479532 UQCR10Q9UDW1 63 aa4.89□□□□□ -1.63
SF3B1-209ENST00000479532 GPR132Q9UNW8 380 aa4.89□□□□□ -1.63
SF3B1-209ENST00000479532 ANK3Q12955 4377 aaKnown RBP4.89□□□□□ -1.63
SF3B1-209ENST00000479532 TRAV9-1A0A075B6T8 112 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 CRYM-AS1A6NIL9 109 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 CCL25O15444 150 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 SLC25A17O43808 307 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 CHST1O43916 411 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 NDUFA3O95167 84 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 CNIH1O95406 144 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 REG1AP05451 166 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 CXCL1P09341 107 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 SMIM17P0DL12 118 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 AKR1C4P17516 323 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 RPL29P47914 159 aaKnown RBP4.88□□□□□ -1.63
SF3B1-209ENST00000479532 LINC00205P59089 165 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 RPL30P62888 115 aaKnown RBP4.88□□□□□ -1.63
SF3B1-209ENST00000479532 SRPXP78539 464 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 ZNF616Q08AN1 781 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 EIF4EBP1Q13541 118 aaPredicted RBP4.88□□□□□ -1.63
SF3B1-209ENST00000479532 PSG5Q15238 335 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 C5orf64Q2M2E5 130 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 OCIAD2Q56VL3 154 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 GFI1BQ5VTD9 330 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 ETFRF1Q6IPR1 90 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 ZNF695Q8IW36 515 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.88□□□□□ -1.63
SF3B1-209ENST00000479532 Q8N9W7 124 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 TEX45Q8NA69 505 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 OR4A5Q8NH83 315 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 TMEM56Q96MV1 263 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 VPS25Q9BRG1 176 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 C19orf24Q9BVV8 132 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 PARD6GQ9BYG4 376 aaPredicted RBP4.88□□□□□ -1.63
SF3B1-209ENST00000479532 C5orf66Q9H5L9 145 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 C16orf95Q9H693 158 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 NAA60Q9H7X0 242 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 ZNF430Q9H8G1 570 aaPredicted RBP4.88□□□□□ -1.63
SF3B1-209ENST00000479532 VSIG4Q9Y279 399 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 TMEM56-RWDD3S4R434 201 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 SVEP1Q4LDE5 3571 aa4.88□□□□□ -1.63
SF3B1-209ENST00000479532 CLPSL1A2RUU4 121 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 RBFOX3A6NFN3 312 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 ZNF705GA8MUZ8 300 aaPredicted RBP4.87□□□□□ -1.63
SF3B1-209ENST00000479532 PRYO14603 147 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 S1PR2O95136 353 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 SFT2D2O95562 160 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 HLA-DRB1P01911 266 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 SRP19P09132 144 aaKnown RBP4.87□□□□□ -1.63
SF3B1-209ENST00000479532 SAA1P0DJI8 122 aaPredicted RBP4.87□□□□□ -1.63
SF3B1-209ENST00000479532 VDAC1P21796 283 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 CNTFRP26992 372 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 CAMLGP49069 296 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 FGF8P55075 233 aaPredicted RBP4.87□□□□□ -1.63
SF3B1-209ENST00000479532 GNB1P62873 340 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 SLC35B1P78383 322 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 TMEM267Q0VDI3 215 aaPredicted RBP4.87□□□□□ -1.63
SF3B1-209ENST00000479532 PPP1R1AQ13522 171 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 ZNF266Q14584 549 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 KRTAP24-1Q3LI83 254 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 ACTL10Q5JWF8 245 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 C12orf54Q6X4T0 127 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 Q6ZSV7 163 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 H2BFWTQ7Z2G1 175 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 PPP1R27Q86WC6 154 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 MMD2Q8IY49 270 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 OR4C5Q8NGB2 326 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 OR4X1Q8NH49 305 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 MRGPRFQ96AM1 343 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 GPR146Q96CH1 333 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 DAZAP1Q96EP5 407 aaKnown RBP4.87□□□□□ -1.63
SF3B1-209ENST00000479532 RNF125Q96EQ8 232 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 RTBDNQ9BSG5 229 aaPredicted RBP4.87□□□□□ -1.63
SF3B1-209ENST00000479532 FBXL15Q9H469 300 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 ZNF702PQ9H963 129 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 BET1LQ9NYM9 111 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 SIGLEC9Q9Y336 463 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms