RNA–Protein interactions for RNA: ENST00000479365.5

SSR1-206, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-206ENST00000479365 GINS3Q9BRX5 216 aa5.31□□□□□ -1.56
SSR1-206ENST00000479365 PDCD10Q9BUL8 212 aa5.31□□□□□ -1.56
SSR1-206ENST00000479365 SLIRPQ9GZT3 109 aaKnown RBP5.31□□□□□ -1.56
SSR1-206ENST00000479365 CSTL1Q9H114 145 aa5.31□□□□□ -1.56
SSR1-206ENST00000479365 ENY2Q9NPA8 101 aa5.31□□□□□ -1.56
SSR1-206ENST00000479365 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.31□□□□□ -1.56
SSR1-206ENST00000479365 CACNG5Q9UF02 275 aa5.31□□□□□ -1.56
SSR1-206ENST00000479365 C14orf166Q9Y224 244 aaKnown RBP5.31□□□□□ -1.56
SSR1-206ENST00000479365 TMEM56-RWDD3S4R434 201 aa5.31□□□□□ -1.56
SSR1-206ENST00000479365 MPTX1A8MV57 137 aa5.3□□□□□ -1.56
SSR1-206ENST00000479365 H3BMQ9 156 aa5.3□□□□□ -1.56
SSR1-206ENST00000479365 GIG44P09565 113 aaPredicted RBP5.3□□□□□ -1.56
SSR1-206ENST00000479365 IGLC1P0CG04 106 aa5.3□□□□□ -1.56
SSR1-206ENST00000479365 CRYBB3P26998 211 aa5.3□□□□□ -1.56
SSR1-206ENST00000479365 RND2P52198 227 aa5.3□□□□□ -1.56
SSR1-206ENST00000479365 SUB1P53999 127 aaKnown RBP eCLIP5.3□□□□□ -1.56
SSR1-206ENST00000479365 TMBIM6P55061 237 aa5.3□□□□□ -1.56
SSR1-206ENST00000479365 DEFB131AP59861 70 aa5.3□□□□□ -1.56
SSR1-206ENST00000479365 SUPT4H1P63272 117 aaKnown RBP5.3□□□□□ -1.56
SSR1-206ENST00000479365 DHODHQ02127 395 aa5.3□□□□□ -1.56
SSR1-206ENST00000479365 TMEM187Q14656 261 aa5.3□□□□□ -1.56
SSR1-206ENST00000479365 C2orf83Q53S99 150 aa5.3□□□□□ -1.56
SSR1-206ENST00000479365 PRSS54Q6PEW0 395 aa5.3□□□□□ -1.56
SSR1-206ENST00000479365 CEMP1Q6PRD7 247 aaPredicted RBP5.3□□□□□ -1.56
SSR1-206ENST00000479365 RAB2BQ8WUD1 216 aa5.3□□□□□ -1.56
SSR1-206ENST00000479365 C6orf62Q9GZU0 229 aaPredicted RBP5.3□□□□□ -1.56
SSR1-206ENST00000479365 TRAV2A0A0B4J234 112 aa5.29□□□□□ -1.56
SSR1-206ENST00000479365 NUPR2A6NF83 97 aa5.29□□□□□ -1.56
SSR1-206ENST00000479365 K7EQG2 157 aa5.29□□□□□ -1.56
SSR1-206ENST00000479365 DNASE2O00115 360 aaPredicted RBP5.29□□□□□ -1.56
SSR1-206ENST00000479365 DEFB4AO15263 64 aa5.29□□□□□ -1.56
SSR1-206ENST00000479365 CA1P00915 261 aaPredicted RBP5.29□□□□□ -1.56
SSR1-206ENST00000479365 NPPCP23582 126 aa5.29□□□□□ -1.56
SSR1-206ENST00000479365 HTR2BP41595 481 aa5.29□□□□□ -1.56
SSR1-206ENST00000479365 P2RY1P47900 373 aa5.29□□□□□ -1.56
SSR1-206ENST00000479365 CMC4P56277 68 aaPredicted RBP5.29□□□□□ -1.56
SSR1-206ENST00000479365 PNRC1Q12796 327 aaPredicted RBP5.29□□□□□ -1.56
SSR1-206ENST00000479365 NMSQ5H8A3 153 aa5.29□□□□□ -1.56
SSR1-206ENST00000479365 SLC24A4Q8NFF2 622 aa5.29□□□□□ -1.56
SSR1-206ENST00000479365 STXBP6Q8NFX7 210 aa5.29□□□□□ -1.56
SSR1-206ENST00000479365 DCANP1Q8TF63 244 aa5.29□□□□□ -1.56
SSR1-206ENST00000479365 GATAD1Q8WUU5 269 aa5.29□□□□□ -1.56
SSR1-206ENST00000479365 PRRT1Q99946 306 aa5.29□□□□□ -1.56
SSR1-206ENST00000479365 BCL7BQ9BQE9 202 aa5.29□□□□□ -1.56
SSR1-206ENST00000479365 ATG101Q9BSB4 218 aa5.29□□□□□ -1.56
SSR1-206ENST00000479365 KRTAP4-11Q9BYQ6 195 aa5.29□□□□□ -1.56
SSR1-206ENST00000479365 RABAC1Q9UI14 185 aa5.29□□□□□ -1.56
SSR1-206ENST00000479365 KNCNA6PVL3 124 aa5.28□□□□□ -1.56
SSR1-206ENST00000479365 CEBPZOSA8MTT3 80 aa5.28□□□□□ -1.56
SSR1-206ENST00000479365 PRAF2O60831 178 aa5.28□□□□□ -1.56
SSR1-206ENST00000479365 LY6G6CO95867 125 aa5.28□□□□□ -1.56
SSR1-206ENST00000479365 CD5P06127 495 aa5.28□□□□□ -1.56
SSR1-206ENST00000479365 ZNF688P0C7X2 276 aa5.28□□□□□ -1.56
SSR1-206ENST00000479365 SULT1A3P0DMM9 295 aa5.28□□□□□ -1.56
SSR1-206ENST00000479365 SULT1A4P0DMN0 295 aa5.28□□□□□ -1.56
SSR1-206ENST00000479365 AKR1C4P17516 323 aa5.28□□□□□ -1.56
SSR1-206ENST00000479365 C4BPBP20851 252 aa5.28□□□□□ -1.56
SSR1-206ENST00000479365 OR10J1P30954 320 aa5.28□□□□□ -1.56
SSR1-206ENST00000479365 NANOS2P60321 138 aaKnown RBP5.28□□□□□ -1.56
SSR1-206ENST00000479365 YPEL3P61236 119 aaPredicted RBP5.28□□□□□ -1.56
SSR1-206ENST00000479365 PAFAH1B2P68402 229 aa5.28□□□□□ -1.56
SSR1-206ENST00000479365 KLF9Q13886 244 aaPredicted RBP5.28□□□□□ -1.56
SSR1-206ENST00000479365 USF2Q15853 346 aaPredicted RBP5.28□□□□□ -1.56
SSR1-206ENST00000479365 SUMO4Q6EEV6 95 aa5.28□□□□□ -1.56
SSR1-206ENST00000479365 LYZL2Q7Z4W2 148 aa5.28□□□□□ -1.56
SSR1-206ENST00000479365 TRPT1Q86TN4 253 aaKnown RBP5.28□□□□□ -1.56
SSR1-206ENST00000479365 OR1S2Q8NGQ3 325 aa5.28□□□□□ -1.56
SSR1-206ENST00000479365 OR11H2Q8NH07 326 aa5.28□□□□□ -1.56
SSR1-206ENST00000479365 RNASEH2CQ8TDP1 164 aaKnown RBP5.28□□□□□ -1.56
SSR1-206ENST00000479365 IL22RA2Q969J5 263 aa5.28□□□□□ -1.56
SSR1-206ENST00000479365 METTL26Q96S19 204 aa5.28□□□□□ -1.56
SSR1-206ENST00000479365 RARRES2Q99969 163 aa5.28□□□□□ -1.56
SSR1-206ENST00000479365 RBKSQ9H477 322 aa5.28□□□□□ -1.56
SSR1-206ENST00000479365 MCUBQ9NWR8 336 aa5.28□□□□□ -1.56
SSR1-206ENST00000479365 RABL2AQ9UBK7 228 aaPredicted RBP5.28□□□□□ -1.56
SSR1-206ENST00000479365 RSL24D1Q9UHA3 163 aaKnown RBP5.28□□□□□ -1.56
SSR1-206ENST00000479365 V9GYH0 126 aa5.28□□□□□ -1.56
SSR1-206ENST00000479365 TRAV30A0A087WSZ9 112 aa5.27□□□□□ -1.57
SSR1-206ENST00000479365 A0A0B4J2A0 478 aa5.27□□□□□ -1.57
SSR1-206ENST00000479365 RPS10-NUDT3A0A1W2PQS6 291 aa5.27□□□□□ -1.57
SSR1-206ENST00000479365 A0A1W2PS18 150 aa5.27□□□□□ -1.57
SSR1-206ENST00000479365 GAGE12JA6NER3 117 aa5.27□□□□□ -1.57
SSR1-206ENST00000479365 FABP12A6NFH5 140 aa5.27□□□□□ -1.57
SSR1-206ENST00000479365 SLC25A4P12235 298 aa5.27□□□□□ -1.57
SSR1-206ENST00000479365 NPY1RP25929 384 aa5.27□□□□□ -1.57
SSR1-206ENST00000479365 SMCO1Q147U7 214 aa5.27□□□□□ -1.57
SSR1-206ENST00000479365 ZNF79Q15937 498 aa5.27□□□□□ -1.57
SSR1-206ENST00000479365 GSG1LQ6UXU4 331 aa5.27□□□□□ -1.57
SSR1-206ENST00000479365 RPP25LQ8N5L8 163 aaKnown RBP5.27□□□□□ -1.57
SSR1-206ENST00000479365 Q8NAQ8 132 aa5.27□□□□□ -1.57
SSR1-206ENST00000479365 MCFD2Q8NI22 146 aa5.27□□□□□ -1.57
SSR1-206ENST00000479365 PHLDA1Q8WV24 401 aaPredicted RBP5.27□□□□□ -1.57
SSR1-206ENST00000479365 ACY3Q96HD9 319 aa5.27□□□□□ -1.57
SSR1-206ENST00000479365 C11orf68Q9H3H3 251 aaKnown RBP5.27□□□□□ -1.57
SSR1-206ENST00000479365 TMEM231Q9H6L2 316 aa5.27□□□□□ -1.57
SSR1-206ENST00000479365 SHPKQ9UHJ6 478 aa5.27□□□□□ -1.57
SSR1-206ENST00000479365 SCP2D1Q9UJQ7 156 aa5.27□□□□□ -1.57
SSR1-206ENST00000479365 VPS13DQ5THJ4 4388 aa5.26□□□□□ -1.57
SSR1-206ENST00000479365 IGKV1D-37A0A075B6S9 117 aa5.26□□□□□ -1.57
SSR1-206ENST00000479365 PITX3O75364 302 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms